RNA–Protein interactions for RNA: ENST00000534788.1

UPK2-202, Transcript of uroplakin 2, humanhuman

TSL 3

Gene UPK2, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-202ENST00000534788 NISCHQ9Y2I1 1504 aa34.04■■■■□ 3.04
UPK2-202ENST00000534788 ABCC9O60706 1549 aa31.08■■■□□ 2.57
UPK2-202ENST00000534788 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
UPK2-202ENST00000534788 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
UPK2-202ENST00000534788 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
UPK2-202ENST00000534788 NACADO15069 1562 aa29.14■■■□□ 2.26
UPK2-202ENST00000534788 UNC13AQ9UPW8 1703 aa28.9■■■□□ 2.22
UPK2-202ENST00000534788 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.21
UPK2-202ENST00000534788 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
UPK2-202ENST00000534788 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
UPK2-202ENST00000534788 MYO15BQ96JP2 1530 aa28.61■■■□□ 2.17
UPK2-202ENST00000534788 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
UPK2-202ENST00000534788 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
UPK2-202ENST00000534788 CC2D2AQ9P2K1 1620 aa28.11■■■□□ 2.09
UPK2-202ENST00000534788 DCAF1Q9Y4B6 1507 aa28.1■■■□□ 2.09
UPK2-202ENST00000534788 CECR2Q9BXF3 1484 aa28.04■■■□□ 2.08
UPK2-202ENST00000534788 SCRIBQ14160 1630 aa28■■■□□ 2.07
UPK2-202ENST00000534788 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
UPK2-202ENST00000534788 DNAJC5Q9H3Z4 198 aa27.35■■□□□ 1.97
UPK2-202ENST00000534788 CUX2O14529 1486 aa26.96■■□□□ 1.91
UPK2-202ENST00000534788 NCAPD3P42695 1498 aa26.88■■□□□ 1.89
UPK2-202ENST00000534788 ERCC6Q03468 1493 aa26.84■■□□□ 1.89
UPK2-202ENST00000534788 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
UPK2-202ENST00000534788 HMGXB3Q12766 1538 aa26.69■■□□□ 1.86
UPK2-202ENST00000534788 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
UPK2-202ENST00000534788 SMARCA2P51531 1590 aa26.66■■□□□ 1.86
UPK2-202ENST00000534788 NESP48681 1621 aa26.62■■□□□ 1.85
UPK2-202ENST00000534788 THOC2Q8NI27 1593 aaKnown RBP26.49■■□□□ 1.83
UPK2-202ENST00000534788 BAZ1BQ9UIG0 1483 aaKnown RBP26.46■■□□□ 1.83
UPK2-202ENST00000534788 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.82
UPK2-202ENST00000534788 PEG3Q9GZU2 1588 aa26.42■■□□□ 1.82
UPK2-202ENST00000534788 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
UPK2-202ENST00000534788 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
UPK2-202ENST00000534788 MROH2BQ7Z745 1585 aa26.24■■□□□ 1.79
UPK2-202ENST00000534788 PDS5BQ9NTI5 1447 aa26.17■■□□□ 1.78
UPK2-202ENST00000534788 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
UPK2-202ENST00000534788 MRC2Q9UBG0 1479 aa26.01■■□□□ 1.75
UPK2-202ENST00000534788 WDR62O43379 1518 aa25.99■■□□□ 1.75
UPK2-202ENST00000534788 TRIM41Q8WV44 630 aa25.96■■□□□ 1.75
UPK2-202ENST00000534788 WIZO95785 1651 aa25.94■■□□□ 1.74
UPK2-202ENST00000534788 CEP164Q9UPV0 1460 aa25.82■■□□□ 1.72
UPK2-202ENST00000534788 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
UPK2-202ENST00000534788 CFTRP13569 1480 aa25.67■■□□□ 1.7
UPK2-202ENST00000534788 URB2Q14146 1524 aaKnown RBP25.6■■□□□ 1.69
UPK2-202ENST00000534788 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
UPK2-202ENST00000534788 TOP2AP11388 1531 aaKnown RBP25.55■■□□□ 1.68
UPK2-202ENST00000534788 RSF1Q96T23 1441 aaPredicted RBP25.51■■□□□ 1.67
UPK2-202ENST00000534788 PRDM2Q13029 1718 aa25.51■■□□□ 1.67
UPK2-202ENST00000534788 RIMBP3CA6NJZ7 1639 aa25.43■■□□□ 1.66
UPK2-202ENST00000534788 RIMBP3BA6NNM3 1639 aa25.43■■□□□ 1.66
UPK2-202ENST00000534788 RIMBP3Q9UFD9 1639 aa25.43■■□□□ 1.66
UPK2-202ENST00000534788 ZNF608Q9ULD9 1512 aaPredicted RBP25.34■■□□□ 1.65
UPK2-202ENST00000534788 IFT140Q96RY7 1462 aa25.31■■□□□ 1.64
UPK2-202ENST00000534788 ARHGEF11O15085 1522 aa25.27■■□□□ 1.64
UPK2-202ENST00000534788 TOPBP1Q92547 1522 aa25.24■■□□□ 1.63
UPK2-202ENST00000534788 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
UPK2-202ENST00000534788 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
UPK2-202ENST00000534788 CHD1O14646 1710 aa25.15■■□□□ 1.62
UPK2-202ENST00000534788 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
UPK2-202ENST00000534788 ABCC8Q09428 1581 aa25.12■■□□□ 1.61
UPK2-202ENST00000534788 TARBP1Q13395 1621 aaKnown RBP25.09■■□□□ 1.61
UPK2-202ENST00000534788 AQRO60306 1485 aaKnown RBP eCLIP25.02■■□□□ 1.6
UPK2-202ENST00000534788 CYB5RLQ6IPT4 315 aa25.02■■□□□ 1.6
UPK2-202ENST00000534788 ARAP1Q96P48 1450 aa25■■□□□ 1.59
UPK2-202ENST00000534788 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
UPK2-202ENST00000534788 FBLN2P98095 1184 aa24.87■■□□□ 1.57
UPK2-202ENST00000534788 RAD54L2Q9Y4B4 1467 aa24.86■■□□□ 1.57
UPK2-202ENST00000534788 TRHP20396 242 aaPredicted RBP24.85■■□□□ 1.57
UPK2-202ENST00000534788 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
UPK2-202ENST00000534788 WDR97A6NE52 1622 aa24.79■■□□□ 1.56
UPK2-202ENST00000534788 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
UPK2-202ENST00000534788 SOGA1O94964 1423 aa24.78■■□□□ 1.56
UPK2-202ENST00000534788 SNAPC4Q5SXM2 1469 aa24.78■■□□□ 1.56
UPK2-202ENST00000534788 FGD5Q6ZNL6 1462 aa24.74■■□□□ 1.55
UPK2-202ENST00000534788 SYNJ1O43426 1573 aa24.72■■□□□ 1.55
UPK2-202ENST00000534788 MAGI1Q96QZ7 1491 aaPredicted RBP24.7■■□□□ 1.54
UPK2-202ENST00000534788 CUX1P39880 1505 aa24.68■■□□□ 1.54
UPK2-202ENST00000534788 GRIN2BQ13224 1484 aa24.64■■□□□ 1.53
UPK2-202ENST00000534788 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
UPK2-202ENST00000534788 PBRM1Q86U86 1689 aa24.62■■□□□ 1.53
UPK2-202ENST00000534788 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
UPK2-202ENST00000534788 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
UPK2-202ENST00000534788 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
UPK2-202ENST00000534788 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
UPK2-202ENST00000534788 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
UPK2-202ENST00000534788 ERCC6L2Q5T890 1561 aa24.39■■□□□ 1.5
UPK2-202ENST00000534788 GRIN2AQ12879 1464 aa24.34■■□□□ 1.49
UPK2-202ENST00000534788 ADAMTS12P58397 1594 aa24.33■■□□□ 1.48
UPK2-202ENST00000534788 CEP170Q5SW79 1584 aa24.32■■□□□ 1.48
UPK2-202ENST00000534788 NUP160Q12769 1436 aa24.28■■□□□ 1.48
UPK2-202ENST00000534788 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
UPK2-202ENST00000534788 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
UPK2-202ENST00000534788 WRNQ14191 1432 aaPredicted RBP eCLIP24.21■■□□□ 1.47
UPK2-202ENST00000534788 KIF13AQ9H1H9 1805 aa24.2■■□□□ 1.46
UPK2-202ENST00000534788 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
UPK2-202ENST00000534788 FHAD1B1AJZ9 1412 aa24.17■■□□□ 1.46
UPK2-202ENST00000534788 ERICH3Q5RHP9 1530 aa24.13■■□□□ 1.45
UPK2-202ENST00000534788 PRG4Q92954 1404 aaPredicted RBP24.04■■□□□ 1.44
UPK2-202ENST00000534788 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
UPK2-202ENST00000534788 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms