RNA–Protein interactions for RNA: ENST00000534683.1

RDX-217, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-217ENST00000534683 NISCHQ9Y2I1 1504 aa40.92■■■■■ 4.14
RDX-217ENST00000534683 CCDC180Q9P1Z9 1646 aa36.53■■■■□ 3.44
RDX-217ENST00000534683 ABCC9O60706 1549 aa36.09■■■■□ 3.37
RDX-217ENST00000534683 RB1CC1Q8TDY2 1594 aa34.55■■■■□ 3.12
RDX-217ENST00000534683 NACADO15069 1562 aa34.45■■■■□ 3.1
RDX-217ENST00000534683 DCAF8L2P0C7V8 631 aa34.21■■■■□ 3.07
RDX-217ENST00000534683 MYO15BQ96JP2 1530 aa34.17■■■■□ 3.06
RDX-217ENST00000534683 ZCCHC6Q5VYS8 1495 aaKnown RBP34.01■■■■□ 3.04
RDX-217ENST00000534683 DCAF1Q9Y4B6 1507 aa33.87■■■■□ 3.01
RDX-217ENST00000534683 UNC13AQ9UPW8 1703 aa33.77■■■■□ 3
RDX-217ENST00000534683 PABPN1Q86U42 306 aaKnown RBP eCLIP33.66■■■□□ 2.98
RDX-217ENST00000534683 BICRAQ9NZM4 1560 aa33.58■■■□□ 2.97
RDX-217ENST00000534683 DNAJC5BQ9UF47 199 aa33.54■■■□□ 2.96
RDX-217ENST00000534683 SCRIBQ14160 1630 aa33.27■■■□□ 2.92
RDX-217ENST00000534683 SHROOM4Q9ULL8 1493 aa33.18■■■□□ 2.9
RDX-217ENST00000534683 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.82
RDX-217ENST00000534683 CC2D2AQ9P2K1 1620 aa32.64■■■□□ 2.82
RDX-217ENST00000534683 CECR2Q9BXF3 1484 aa32.48■■■□□ 2.79
RDX-217ENST00000534683 NCAPD3P42695 1498 aa31.82■■■□□ 2.68
RDX-217ENST00000534683 SMARCA4P51532 1647 aa31.82■■■□□ 2.68
RDX-217ENST00000534683 ATAD2BQ9ULI0 1458 aa31.77■■■□□ 2.68
RDX-217ENST00000534683 BAZ1AQ9NRL2 1556 aaPredicted RBP31.72■■■□□ 2.67
RDX-217ENST00000534683 SMARCA2P51531 1590 aa31.67■■■□□ 2.66
RDX-217ENST00000534683 HMGXB3Q12766 1538 aa31.61■■■□□ 2.65
RDX-217ENST00000534683 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
RDX-217ENST00000534683 MROH2BQ7Z745 1585 aa31.52■■■□□ 2.64
RDX-217ENST00000534683 BAZ1BQ9UIG0 1483 aaKnown RBP31.44■■■□□ 2.62
RDX-217ENST00000534683 NESP48681 1621 aa31.14■■■□□ 2.58
RDX-217ENST00000534683 WIZO95785 1651 aa31.13■■■□□ 2.57
RDX-217ENST00000534683 ERCC6Q03468 1493 aa31.1■■■□□ 2.57
RDX-217ENST00000534683 RSF1Q96T23 1441 aaPredicted RBP31.03■■■□□ 2.56
RDX-217ENST00000534683 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
RDX-217ENST00000534683 CUX2O14529 1486 aa30.98■■■□□ 2.55
RDX-217ENST00000534683 CADPSQ9ULU8 1353 aa30.85■■■□□ 2.53
RDX-217ENST00000534683 TOP2AP11388 1531 aaKnown RBP30.8■■■□□ 2.52
RDX-217ENST00000534683 PDS5BQ9NTI5 1447 aa30.8■■■□□ 2.52
RDX-217ENST00000534683 THOC2Q8NI27 1593 aaKnown RBP30.77■■■□□ 2.52
RDX-217ENST00000534683 KIF21AQ7Z4S6 1674 aa30.74■■■□□ 2.51
RDX-217ENST00000534683 CFTRP13569 1480 aa30.6■■■□□ 2.49
RDX-217ENST00000534683 MRC2Q9UBG0 1479 aa30.51■■■□□ 2.48
RDX-217ENST00000534683 DNAJC5Q9H3Z4 198 aa30.49■■■□□ 2.47
RDX-217ENST00000534683 FANCD2Q9BXW9 1451 aa30.47■■■□□ 2.47
RDX-217ENST00000534683 CCDC88BA6NC98 1476 aa30.45■■■□□ 2.47
RDX-217ENST00000534683 CEP164Q9UPV0 1460 aa30.45■■■□□ 2.47
RDX-217ENST00000534683 WDR62O43379 1518 aa30.45■■■□□ 2.47
RDX-217ENST00000534683 PRDM2Q13029 1718 aa30.27■■■□□ 2.44
RDX-217ENST00000534683 URB2Q14146 1524 aaKnown RBP30.22■■■□□ 2.43
RDX-217ENST00000534683 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
RDX-217ENST00000534683 ABCC8Q09428 1581 aa29.91■■■□□ 2.38
RDX-217ENST00000534683 DNMBPQ6XZF7 1577 aa29.88■■■□□ 2.37
RDX-217ENST00000534683 IFT140Q96RY7 1462 aa29.86■■■□□ 2.37
RDX-217ENST00000534683 SUPT5HO00267 1087 aaKnown RBP29.85■■■□□ 2.37
RDX-217ENST00000534683 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.36
RDX-217ENST00000534683 POLA1P09884 1462 aaPredicted RBP29.68■■■□□ 2.34
RDX-217ENST00000534683 TARBP1Q13395 1621 aaKnown RBP29.68■■■□□ 2.34
RDX-217ENST00000534683 EIF4G3O43432 1585 aaKnown RBP29.61■■■□□ 2.33
RDX-217ENST00000534683 CUX1P39880 1505 aa29.6■■■□□ 2.33
RDX-217ENST00000534683 OSCARQ8IYS5 282 aa29.59■■■□□ 2.33
RDX-217ENST00000534683 RAD54L2Q9Y4B4 1467 aa29.55■■■□□ 2.32
RDX-217ENST00000534683 AQRO60306 1485 aaKnown RBP eCLIP29.54■■■□□ 2.32
RDX-217ENST00000534683 FGD5Q6ZNL6 1462 aa29.54■■■□□ 2.32
RDX-217ENST00000534683 SOGA1O94964 1423 aa29.53■■■□□ 2.32
RDX-217ENST00000534683 TDRD9Q8NDG6 1382 aaKnown RBP29.41■■■□□ 2.3
RDX-217ENST00000534683 WDR97A6NE52 1622 aa29.41■■■□□ 2.3
RDX-217ENST00000534683 CHD1O14646 1710 aa29.28■■■□□ 2.28
RDX-217ENST00000534683 ABCA10Q8WWZ4 1543 aa29.25■■■□□ 2.27
RDX-217ENST00000534683 SNAPC4Q5SXM2 1469 aa29.24■■■□□ 2.27
RDX-217ENST00000534683 GRIN2BQ13224 1484 aa29.23■■■□□ 2.27
RDX-217ENST00000534683 WRNQ14191 1432 aaPredicted RBP eCLIP29.23■■■□□ 2.27
RDX-217ENST00000534683 TOP2BQ02880 1626 aa29.23■■■□□ 2.27
RDX-217ENST00000534683 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
RDX-217ENST00000534683 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
RDX-217ENST00000534683 MAGI1Q96QZ7 1491 aaPredicted RBP29.21■■■□□ 2.27
RDX-217ENST00000534683 SYNJ1O43426 1573 aa29.2■■■□□ 2.26
RDX-217ENST00000534683 GAPVD1Q14C86 1478 aa29.18■■■□□ 2.26
RDX-217ENST00000534683 FBLN2P98095 1184 aa29.18■■■□□ 2.26
RDX-217ENST00000534683 RIMBP3CA6NJZ7 1639 aa29.17■■■□□ 2.26
RDX-217ENST00000534683 RIMBP3BA6NNM3 1639 aa29.17■■■□□ 2.26
RDX-217ENST00000534683 RIMBP3Q9UFD9 1639 aa29.17■■■□□ 2.26
RDX-217ENST00000534683 ABCA5Q8WWZ7 1642 aa29.16■■■□□ 2.26
RDX-217ENST00000534683 ARHGEF11O15085 1522 aa29.14■■■□□ 2.25
RDX-217ENST00000534683 PBRM1Q86U86 1689 aa29.12■■■□□ 2.25
RDX-217ENST00000534683 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
RDX-217ENST00000534683 CHMP7Q8WUX9 453 aaPredicted RBP29.07■■■□□ 2.24
RDX-217ENST00000534683 CLASP1Q7Z460 1538 aa29.03■■■□□ 2.24
RDX-217ENST00000534683 ADAMTS12P58397 1594 aa28.91■■■□□ 2.22
RDX-217ENST00000534683 ARAP1Q96P48 1450 aa28.9■■■□□ 2.22
RDX-217ENST00000534683 ERICH3Q5RHP9 1530 aa28.89■■■□□ 2.21
RDX-217ENST00000534683 GRIN2AQ12879 1464 aa28.86■■■□□ 2.21
RDX-217ENST00000534683 CYB5RLQ6IPT4 315 aa28.84■■■□□ 2.21
RDX-217ENST00000534683 FHAD1B1AJZ9 1412 aa28.84■■■□□ 2.21
RDX-217ENST00000534683 NUP160Q12769 1436 aa28.78■■■□□ 2.2
RDX-217ENST00000534683 CEP170Q5SW79 1584 aa28.75■■■□□ 2.19
RDX-217ENST00000534683 KIF27Q86VH2 1401 aa28.64■■■□□ 2.18
RDX-217ENST00000534683 IGF1RP08069 1367 aa28.62■■■□□ 2.17
RDX-217ENST00000534683 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
RDX-217ENST00000534683 ERCC6L2Q5T890 1561 aa28.58■■■□□ 2.17
RDX-217ENST00000534683 CUL7Q14999 1698 aa28.52■■■□□ 2.16
RDX-217ENST00000534683 RUSC2Q8N2Y8 1516 aa28.49■■■□□ 2.15
RDX-217ENST00000534683 JPH4Q96JJ6 628 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms