RNA–Protein interactions for RNA: ENST00000534682.1

NTRK1-210, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

TSL 4

Gene NTRK1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-210ENST00000534682 NISCHQ9Y2I1 1504 aa32.22■■■□□ 2.75
NTRK1-210ENST00000534682 CCDC180Q9P1Z9 1646 aa28.95■■■□□ 2.23
NTRK1-210ENST00000534682 ABCC9O60706 1549 aa28.89■■■□□ 2.21
NTRK1-210ENST00000534682 RB1CC1Q8TDY2 1594 aa27.5■■□□□ 1.99
NTRK1-210ENST00000534682 NACADO15069 1562 aa27.29■■□□□ 1.96
NTRK1-210ENST00000534682 DCAF8L2P0C7V8 631 aa27.19■■□□□ 1.94
NTRK1-210ENST00000534682 UNC13AQ9UPW8 1703 aa27.03■■□□□ 1.92
NTRK1-210ENST00000534682 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
NTRK1-210ENST00000534682 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
NTRK1-210ENST00000534682 MYO15BQ96JP2 1530 aa26.86■■□□□ 1.89
NTRK1-210ENST00000534682 ZCCHC6Q5VYS8 1495 aaKnown RBP26.72■■□□□ 1.87
NTRK1-210ENST00000534682 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
NTRK1-210ENST00000534682 DCAF1Q9Y4B6 1507 aa26.57■■□□□ 1.84
NTRK1-210ENST00000534682 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
NTRK1-210ENST00000534682 SHROOM4Q9ULL8 1493 aa26.25■■□□□ 1.79
NTRK1-210ENST00000534682 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
NTRK1-210ENST00000534682 EIF4G1Q04637 1599 aaKnown RBP26.04■■□□□ 1.76
NTRK1-210ENST00000534682 CECR2Q9BXF3 1484 aa25.98■■□□□ 1.75
NTRK1-210ENST00000534682 SMARCA4P51532 1647 aa25.18■■□□□ 1.62
NTRK1-210ENST00000534682 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
NTRK1-210ENST00000534682 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
NTRK1-210ENST00000534682 SMARCA2P51531 1590 aa25.06■■□□□ 1.6
NTRK1-210ENST00000534682 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
NTRK1-210ENST00000534682 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
NTRK1-210ENST00000534682 ERCC6Q03468 1493 aa24.92■■□□□ 1.58
NTRK1-210ENST00000534682 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
NTRK1-210ENST00000534682 MROH2BQ7Z745 1585 aa24.86■■□□□ 1.57
NTRK1-210ENST00000534682 PEG3Q9GZU2 1588 aa24.86■■□□□ 1.57
NTRK1-210ENST00000534682 NESP48681 1621 aa24.84■■□□□ 1.57
NTRK1-210ENST00000534682 CUX2O14529 1486 aa24.8■■□□□ 1.56
NTRK1-210ENST00000534682 DNAJC5Q9H3Z4 198 aa24.67■■□□□ 1.54
NTRK1-210ENST00000534682 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.54
NTRK1-210ENST00000534682 WIZO95785 1651 aa24.63■■□□□ 1.53
NTRK1-210ENST00000534682 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
NTRK1-210ENST00000534682 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
NTRK1-210ENST00000534682 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
NTRK1-210ENST00000534682 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
NTRK1-210ENST00000534682 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
NTRK1-210ENST00000534682 MRC2Q9UBG0 1479 aa24.27■■□□□ 1.48
NTRK1-210ENST00000534682 TOP2AP11388 1531 aaKnown RBP24.26■■□□□ 1.47
NTRK1-210ENST00000534682 WDR62O43379 1518 aa24.22■■□□□ 1.47
NTRK1-210ENST00000534682 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
NTRK1-210ENST00000534682 FANCD2Q9BXW9 1451 aa24.16■■□□□ 1.46
NTRK1-210ENST00000534682 CFTRP13569 1480 aa24.13■■□□□ 1.45
NTRK1-210ENST00000534682 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
NTRK1-210ENST00000534682 URB2Q14146 1524 aaKnown RBP23.98■■□□□ 1.43
NTRK1-210ENST00000534682 CCDC88BA6NC98 1476 aa23.96■■□□□ 1.43
NTRK1-210ENST00000534682 TRIM41Q8WV44 630 aa23.73■■□□□ 1.39
NTRK1-210ENST00000534682 TOPBP1Q92547 1522 aa23.73■■□□□ 1.39
NTRK1-210ENST00000534682 ZNF608Q9ULD9 1512 aaPredicted RBP23.68■■□□□ 1.38
NTRK1-210ENST00000534682 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
NTRK1-210ENST00000534682 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
NTRK1-210ENST00000534682 OSCARQ8IYS5 282 aa23.64■■□□□ 1.37
NTRK1-210ENST00000534682 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
NTRK1-210ENST00000534682 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
NTRK1-210ENST00000534682 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
NTRK1-210ENST00000534682 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
NTRK1-210ENST00000534682 CHD1O14646 1710 aa23.48■■□□□ 1.35
NTRK1-210ENST00000534682 RIMBP3CA6NJZ7 1639 aa23.47■■□□□ 1.35
NTRK1-210ENST00000534682 RIMBP3BA6NNM3 1639 aa23.47■■□□□ 1.35
NTRK1-210ENST00000534682 RIMBP3Q9UFD9 1639 aa23.47■■□□□ 1.35
NTRK1-210ENST00000534682 AQRO60306 1485 aaKnown RBP eCLIP23.46■■□□□ 1.357e-6■■□□□ 12.2
NTRK1-210ENST00000534682 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
NTRK1-210ENST00000534682 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
NTRK1-210ENST00000534682 CUX1P39880 1505 aa23.36■■□□□ 1.33
NTRK1-210ENST00000534682 SOGA1O94964 1423 aa23.34■■□□□ 1.33
NTRK1-210ENST00000534682 ARHGEF11O15085 1522 aa23.34■■□□□ 1.33
NTRK1-210ENST00000534682 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.33
NTRK1-210ENST00000534682 TDRD9Q8NDG6 1382 aaKnown RBP23.31■■□□□ 1.32
NTRK1-210ENST00000534682 FBLN2P98095 1184 aa23.3■■□□□ 1.32
NTRK1-210ENST00000534682 WDR97A6NE52 1622 aa23.27■■□□□ 1.32
NTRK1-210ENST00000534682 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
NTRK1-210ENST00000534682 PBRM1Q86U86 1689 aa23.21■■□□□ 1.31
NTRK1-210ENST00000534682 GRIN2BQ13224 1484 aa23.14■■□□□ 1.29
NTRK1-210ENST00000534682 MAGI1Q96QZ7 1491 aaPredicted RBP23.14■■□□□ 1.29
NTRK1-210ENST00000534682 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
NTRK1-210ENST00000534682 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
NTRK1-210ENST00000534682 SYNJ1O43426 1573 aa23.1■■□□□ 1.29
NTRK1-210ENST00000534682 CLASP1Q7Z460 1538 aa23.1■■□□□ 1.29
NTRK1-210ENST00000534682 CHMP7Q8WUX9 453 aaPredicted RBP23.09■■□□□ 1.29
NTRK1-210ENST00000534682 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.29
NTRK1-210ENST00000534682 GAPVD1Q14C86 1478 aa23.08■■□□□ 1.29
NTRK1-210ENST00000534682 ABCA10Q8WWZ4 1543 aa23.07■■□□□ 1.28
NTRK1-210ENST00000534682 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
NTRK1-210ENST00000534682 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
NTRK1-210ENST00000534682 TOP2BQ02880 1626 aa23■■□□□ 1.27
NTRK1-210ENST00000534682 WRNQ14191 1432 aaPredicted RBP eCLIP22.96■■□□□ 1.27
NTRK1-210ENST00000534682 ADAMTS12P58397 1594 aa22.92■■□□□ 1.26
NTRK1-210ENST00000534682 TRHP20396 242 aaPredicted RBP22.89■■□□□ 1.25
NTRK1-210ENST00000534682 GRIN2AQ12879 1464 aa22.86■■□□□ 1.25
NTRK1-210ENST00000534682 CEP170Q5SW79 1584 aa22.83■■□□□ 1.25
NTRK1-210ENST00000534682 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
NTRK1-210ENST00000534682 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
NTRK1-210ENST00000534682 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
NTRK1-210ENST00000534682 NUP160Q12769 1436 aa22.76■■□□□ 1.23
NTRK1-210ENST00000534682 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
NTRK1-210ENST00000534682 RUSC2Q8N2Y8 1516 aa22.59■■□□□ 1.21
NTRK1-210ENST00000534682 PRG4Q92954 1404 aaPredicted RBP22.56■■□□□ 1.2
NTRK1-210ENST00000534682 CUL7Q14999 1698 aa22.52■■□□□ 1.2
NTRK1-210ENST00000534682 KIF27Q86VH2 1401 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms