RNA–Protein interactions for RNA: ENST00000534614.1

CELF1-217, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-217ENST00000534614 NISCHQ9Y2I1 1504 aa24.59■■□□□ 1.53
CELF1-217ENST00000534614 CCDC180Q9P1Z9 1646 aa22.22■■□□□ 1.15
CELF1-217ENST00000534614 ABCC9O60706 1549 aa22.16■■□□□ 1.14
CELF1-217ENST00000534614 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
CELF1-217ENST00000534614 NACADO15069 1562 aa20.97■□□□□ 0.95
CELF1-217ENST00000534614 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
CELF1-217ENST00000534614 MYO15BQ96JP2 1530 aa20.75■□□□□ 0.91
CELF1-217ENST00000534614 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
CELF1-217ENST00000534614 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
CELF1-217ENST00000534614 PABPN1Q86U42 306 aaKnown RBP eCLIP20.51■□□□□ 0.87
CELF1-217ENST00000534614 DCAF8L2P0C7V8 631 aa20.43■□□□□ 0.86
CELF1-217ENST00000534614 DCAF1Q9Y4B6 1507 aa20.4■□□□□ 0.86
CELF1-217ENST00000534614 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
CELF1-217ENST00000534614 SHROOM4Q9ULL8 1493 aa20.36■□□□□ 0.85
CELF1-217ENST00000534614 CC2D2AQ9P2K1 1620 aa20.09■□□□□ 0.81
CELF1-217ENST00000534614 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
CELF1-217ENST00000534614 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
CELF1-217ENST00000534614 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.8
CELF1-217ENST00000534614 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
CELF1-217ENST00000534614 DNAJC5Q9H3Z4 198 aa19.33■□□□□ 0.68
CELF1-217ENST00000534614 CUX2O14529 1486 aa19.28■□□□□ 0.68
CELF1-217ENST00000534614 ATAD2BQ9ULI0 1458 aa19.26■□□□□ 0.67
CELF1-217ENST00000534614 HMGXB3Q12766 1538 aa19.25■□□□□ 0.67
CELF1-217ENST00000534614 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
CELF1-217ENST00000534614 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
CELF1-217ENST00000534614 PEG3Q9GZU2 1588 aa19.13■□□□□ 0.65
CELF1-217ENST00000534614 ERCC6Q03468 1493 aa19.11■□□□□ 0.65
CELF1-217ENST00000534614 BAZ1AQ9NRL2 1556 aaPredicted RBP19.09■□□□□ 0.65
CELF1-217ENST00000534614 NESP48681 1621 aa19.03■□□□□ 0.64
CELF1-217ENST00000534614 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.63
CELF1-217ENST00000534614 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
CELF1-217ENST00000534614 LAMC3Q9Y6N6 1575 aa18.95■□□□□ 0.62
CELF1-217ENST00000534614 MROH2BQ7Z745 1585 aa18.92■□□□□ 0.62
CELF1-217ENST00000534614 KIF21AQ7Z4S6 1674 aa18.84■□□□□ 0.61
CELF1-217ENST00000534614 PDS5BQ9NTI5 1447 aa18.76■□□□□ 0.59
CELF1-217ENST00000534614 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
CELF1-217ENST00000534614 WDR62O43379 1518 aa18.68■□□□□ 0.58
CELF1-217ENST00000534614 WIZO95785 1651 aa18.66■□□□□ 0.58
CELF1-217ENST00000534614 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
CELF1-217ENST00000534614 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.56
CELF1-217ENST00000534614 CFTRP13569 1480 aa18.52■□□□□ 0.55
CELF1-217ENST00000534614 FANCD2Q9BXW9 1451 aa18.49■□□□□ 0.55
CELF1-217ENST00000534614 TOP2AP11388 1531 aaKnown RBP18.47■□□□□ 0.55
CELF1-217ENST00000534614 RSF1Q96T23 1441 aaPredicted RBP18.47■□□□□ 0.55
CELF1-217ENST00000534614 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
CELF1-217ENST00000534614 PRDM2Q13029 1718 aa18.38■□□□□ 0.53
CELF1-217ENST00000534614 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
CELF1-217ENST00000534614 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
CELF1-217ENST00000534614 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
CELF1-217ENST00000534614 IFT140Q96RY7 1462 aa18.19■□□□□ 0.5
CELF1-217ENST00000534614 TOPBP1Q92547 1522 aa18.15■□□□□ 0.5
CELF1-217ENST00000534614 ZNF608Q9ULD9 1512 aaPredicted RBP18.15■□□□□ 0.5
CELF1-217ENST00000534614 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
CELF1-217ENST00000534614 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
CELF1-217ENST00000534614 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
CELF1-217ENST00000534614 DNMBPQ6XZF7 1577 aa18.1■□□□□ 0.49
CELF1-217ENST00000534614 EIF4G3O43432 1585 aaKnown RBP18.09■□□□□ 0.49
CELF1-217ENST00000534614 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
CELF1-217ENST00000534614 TARBP1Q13395 1621 aaKnown RBP18.06■□□□□ 0.48
CELF1-217ENST00000534614 ARHGEF11O15085 1522 aa18.04■□□□□ 0.48
CELF1-217ENST00000534614 CHD1O14646 1710 aa17.98■□□□□ 0.47
CELF1-217ENST00000534614 POLA1P09884 1462 aaPredicted RBP17.96■□□□□ 0.47
CELF1-217ENST00000534614 WDR97A6NE52 1622 aa17.91■□□□□ 0.46
CELF1-217ENST00000534614 AQRO60306 1485 aaKnown RBP eCLIP17.91■□□□□ 0.461e-8■■■■■ 27.4
CELF1-217ENST00000534614 ARAP1Q96P48 1450 aa17.87■□□□□ 0.45
CELF1-217ENST00000534614 RAD54L2Q9Y4B4 1467 aa17.83■□□□□ 0.45
CELF1-217ENST00000534614 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
CELF1-217ENST00000534614 CUX1P39880 1505 aa17.8■□□□□ 0.44
CELF1-217ENST00000534614 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
CELF1-217ENST00000534614 SOGA1O94964 1423 aa17.79■□□□□ 0.44
CELF1-217ENST00000534614 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
CELF1-217ENST00000534614 MAGI1Q96QZ7 1491 aaPredicted RBP17.77■□□□□ 0.44
CELF1-217ENST00000534614 TDRD9Q8NDG6 1382 aaKnown RBP17.76■□□□□ 0.43
CELF1-217ENST00000534614 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
CELF1-217ENST00000534614 SYNJ1O43426 1573 aa17.71■□□□□ 0.43
CELF1-217ENST00000534614 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
CELF1-217ENST00000534614 SYNJ2O15056 1496 aa17.69■□□□□ 0.42
CELF1-217ENST00000534614 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
CELF1-217ENST00000534614 ABCA5Q8WWZ7 1642 aa17.67■□□□□ 0.42
CELF1-217ENST00000534614 ABCA10Q8WWZ4 1543 aa17.65■□□□□ 0.42
CELF1-217ENST00000534614 FBLN2P98095 1184 aa17.64■□□□□ 0.41
CELF1-217ENST00000534614 GAPVD1Q14C86 1478 aa17.61■□□□□ 0.41
CELF1-217ENST00000534614 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
CELF1-217ENST00000534614 ADAMTS12P58397 1594 aa17.53■□□□□ 0.4
CELF1-217ENST00000534614 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
CELF1-217ENST00000534614 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
CELF1-217ENST00000534614 NUP160Q12769 1436 aa17.5■□□□□ 0.39
CELF1-217ENST00000534614 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
CELF1-217ENST00000534614 TOP2BQ02880 1626 aa17.5■□□□□ 0.39
CELF1-217ENST00000534614 SHROOM2Q13796 1616 aa17.48■□□□□ 0.39
CELF1-217ENST00000534614 CEP170Q5SW79 1584 aa17.47■□□□□ 0.39
CELF1-217ENST00000534614 ERCC6L2Q5T890 1561 aa17.47■□□□□ 0.39
CELF1-217ENST00000534614 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
CELF1-217ENST00000534614 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
CELF1-217ENST00000534614 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
CELF1-217ENST00000534614 KIF13AQ9H1H9 1805 aa17.29■□□□□ 0.36
CELF1-217ENST00000534614 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
CELF1-217ENST00000534614 SUPT5HO00267 1087 aaKnown RBP17.26■□□□□ 0.35
CELF1-217ENST00000534614 PRG4Q92954 1404 aaPredicted RBP17.22■□□□□ 0.35
CELF1-217ENST00000534614 MAPKBP1O60336 1514 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms