RNA–Protein interactions for RNA: ENST00000534578.5

SYBU-238, Transcript of syntabulin, human

TSL 3

Gene SYBU, Length 559 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYBU-238	ENST00000534578	NISCH	Q9Y2I1	1504 aa		45.01	■■■■■ 4.8
SYBU-238	ENST00000534578	CCDC180	Q9P1Z9	1646 aa		40.29	■■■■■ 4.04
SYBU-238	ENST00000534578	ABCC9	O60706	1549 aa		40.11	■■■■■ 4.01
SYBU-238	ENST00000534578	RB1CC1	Q8TDY2	1594 aa		38.24	■■■■□ 3.71
SYBU-238	ENST00000534578	NACAD	O15069	1562 aa		38.05	■■■■□ 3.68
SYBU-238	ENST00000534578	DCAF8L2	P0C7V8	631 aa		37.87	■■■■□ 3.65
SYBU-238	ENST00000534578	MYO15B	Q96JP2	1530 aa		37.6	■■■■□ 3.61
SYBU-238	ENST00000534578	DNAJC5B	Q9UF47	199 aa		37.51	■■■■□ 3.6
SYBU-238	ENST00000534578	UNC13A	Q9UPW8	1703 aa		37.44	■■■■□ 3.58
SYBU-238	ENST00000534578	PABPN1	Q86U42	306 aa	Known RBP eCLIP	37.38	■■■■□ 3.57
SYBU-238	ENST00000534578	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.34	■■■■□ 3.57
SYBU-238	ENST00000534578	DCAF1	Q9Y4B6	1507 aa		37.2	■■■■□ 3.55
SYBU-238	ENST00000534578	BICRA	Q9NZM4	1560 aa		37.18	■■■■□ 3.54
SYBU-238	ENST00000534578	SCRIB	Q14160	1630 aa		36.72	■■■■□ 3.47
SYBU-238	ENST00000534578	SHROOM4	Q9ULL8	1493 aa		36.64	■■■■□ 3.46
SYBU-238	ENST00000534578	CC2D2A	Q9P2K1	1620 aa		36.25	■■■■□ 3.39
SYBU-238	ENST00000534578	EIF4G1	Q04637	1599 aa	Known RBP	36.21	■■■■□ 3.39
SYBU-238	ENST00000534578	CECR2	Q9BXF3	1484 aa		36.11	■■■■□ 3.37
SYBU-238	ENST00000534578	NCAPD3	P42695	1498 aa		35.14	■■■■□ 3.22
SYBU-238	ENST00000534578	SMARCA4	P51532	1647 aa		35.06	■■■■□ 3.2
SYBU-238	ENST00000534578	ATAD2B	Q9ULI0	1458 aa		35.06	■■■■□ 3.2
SYBU-238	ENST00000534578	SMARCA2	P51531	1590 aa		34.95	■■■■□ 3.18
SYBU-238	ENST00000534578	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	34.9	■■■■□ 3.18
SYBU-238	ENST00000534578	HMGXB3	Q12766	1538 aa		34.88	■■■■□ 3.17
SYBU-238	ENST00000534578	PEG3	Q9GZU2	1588 aa		34.74	■■■■□ 3.15
SYBU-238	ENST00000534578	MROH2B	Q7Z745	1585 aa		34.7	■■■■□ 3.15
SYBU-238	ENST00000534578	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.7	■■■■□ 3.15
SYBU-238	ENST00000534578	ERCC6	Q03468	1493 aa		34.58	■■■■□ 3.13
SYBU-238	ENST00000534578	NES	P48681	1621 aa		34.53	■■■■□ 3.12
SYBU-238	ENST00000534578	CUX2	O14529	1486 aa		34.47	■■■■□ 3.11
SYBU-238	ENST00000534578	LAMC3	Q9Y6N6	1575 aa		34.29	■■■■□ 3.08
SYBU-238	ENST00000534578	WIZ	O95785	1651 aa		34.28	■■■■□ 3.08
SYBU-238	ENST00000534578	DNAJC5	Q9H3Z4	198 aa		34.26	■■■■□ 3.08
SYBU-238	ENST00000534578	THOC2	Q8NI27	1593 aa	Known RBP	34.13	■■■■□ 3.05
SYBU-238	ENST00000534578	KIF21A	Q7Z4S6	1674 aa		34.09	■■■■□ 3.05
SYBU-238	ENST00000534578	PDS5B	Q9NTI5	1447 aa		34.07	■■■■□ 3.04
SYBU-238	ENST00000534578	CADPS	Q9ULU8	1353 aa		34.07	■■■■□ 3.04
SYBU-238	ENST00000534578	RSF1	Q96T23	1441 aa	Predicted RBP	34.05	■■■■□ 3.04
SYBU-238	ENST00000534578	TOP2A	P11388	1531 aa	Known RBP	33.85	■■■■□ 3.01
SYBU-238	ENST00000534578	MRC2	Q9UBG0	1479 aa		33.78	■■■■□ 3
SYBU-238	ENST00000534578	CFTR	P13569	1480 aa		33.73	■■■□□ 2.99
SYBU-238	ENST00000534578	WDR62	O43379	1518 aa		33.7	■■■□□ 2.99
SYBU-238	ENST00000534578	FANCD2	Q9BXW9	1451 aa		33.68	■■■□□ 2.98
SYBU-238	ENST00000534578	CEP164	Q9UPV0	1460 aa		33.68	■■■□□ 2.98
SYBU-238	ENST00000534578	CCDC88B	A6NC98	1476 aa		33.49	■■■□□ 2.95
SYBU-238	ENST00000534578	URB2	Q14146	1524 aa	Known RBP	33.41	■■■□□ 2.94
SYBU-238	ENST00000534578	PRDM2	Q13029	1718 aa		33.41	■■■□□ 2.94
SYBU-238	ENST00000534578	TOPBP1	Q92547	1522 aa		33.07	■■■□□ 2.89
SYBU-238	ENST00000534578	IFT140	Q96RY7	1462 aa		33.01	■■■□□ 2.88
SYBU-238	ENST00000534578	ABCC8	Q09428	1581 aa		32.99	■■■□□ 2.87
SYBU-238	ENST00000534578	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.97	■■■□□ 2.87
SYBU-238	ENST00000534578	DNMBP	Q6XZF7	1577 aa		32.96	■■■□□ 2.87
SYBU-238	ENST00000534578	OSCAR	Q8IYS5	282 aa		32.94	■■■□□ 2.86
SYBU-238	ENST00000534578	TRIM41	Q8WV44	630 aa		32.8	■■■□□ 2.84
SYBU-238	ENST00000534578	TARBP1	Q13395	1621 aa	Known RBP	32.78	■■■□□ 2.84
SYBU-238	ENST00000534578	EIF4G3	O43432	1585 aa	Known RBP	32.76	■■■□□ 2.84
SYBU-238	ENST00000534578	POLA1	P09884	1462 aa	Predicted RBP	32.75	■■■□□ 2.83
SYBU-238	ENST00000534578	AQR	O60306	1485 aa	Known RBP eCLIP	32.68	■■■□□ 2.82
SYBU-238	ENST00000534578	SUPT5H	O00267	1087 aa	Known RBP	32.66	■■■□□ 2.82
SYBU-238	ENST00000534578	RAD54L2	Q9Y4B4	1467 aa		32.63	■■■□□ 2.81
SYBU-238	ENST00000534578	SOGA1	O94964	1423 aa		32.6	■■■□□ 2.81
SYBU-238	ENST00000534578	CUX1	P39880	1505 aa		32.58	■■■□□ 2.81
SYBU-238	ENST00000534578	FGD5	Q6ZNL6	1462 aa		32.56	■■■□□ 2.8
SYBU-238	ENST00000534578	TDRD9	Q8NDG6	1382 aa	Known RBP	32.51	■■■□□ 2.79
SYBU-238	ENST00000534578	CHD1	O14646	1710 aa		32.51	■■■□□ 2.79
SYBU-238	ENST00000534578	RIMBP3C	A6NJZ7	1639 aa		32.5	■■■□□ 2.79
SYBU-238	ENST00000534578	RIMBP3B	A6NNM3	1639 aa		32.5	■■■□□ 2.79
SYBU-238	ENST00000534578	RIMBP3	Q9UFD9	1639 aa		32.5	■■■□□ 2.79
SYBU-238	ENST00000534578	WDR97	A6NE52	1622 aa		32.42	■■■□□ 2.78
SYBU-238	ENST00000534578	ARHGEF11	O15085	1522 aa		32.41	■■■□□ 2.78
SYBU-238	ENST00000534578	FBLN2	P98095	1184 aa		32.39	■■■□□ 2.78
SYBU-238	ENST00000534578	SNAPC4	Q5SXM2	1469 aa		32.34	■■■□□ 2.77
SYBU-238	ENST00000534578	GRIN2B	Q13224	1484 aa		32.29	■■■□□ 2.76
SYBU-238	ENST00000534578	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.26	■■■□□ 2.75
SYBU-238	ENST00000534578	ABCA10	Q8WWZ4	1543 aa		32.21	■■■□□ 2.75
SYBU-238	ENST00000534578	GAPVD1	Q14C86	1478 aa		32.2	■■■□□ 2.75
SYBU-238	ENST00000534578	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.19	■■■□□ 2.74
SYBU-238	ENST00000534578	PBRM1	Q86U86	1689 aa		32.18	■■■□□ 2.74
SYBU-238	ENST00000534578	CYB5RL	Q6IPT4	315 aa		32.16	■■■□□ 2.74
SYBU-238	ENST00000534578	SYNJ2	O15056	1496 aa		32.15	■■■□□ 2.74
SYBU-238	ENST00000534578	ABCA5	Q8WWZ7	1642 aa		32.15	■■■□□ 2.74
SYBU-238	ENST00000534578	CLASP1	Q7Z460	1538 aa		32.14	■■■□□ 2.74
SYBU-238	ENST00000534578	ARAP1	Q96P48	1450 aa		32.12	■■■□□ 2.73
SYBU-238	ENST00000534578	BIVM-ERCC5	R4GMW8	1640 aa		32.11	■■■□□ 2.73
SYBU-238	ENST00000534578	SYNJ1	O43426	1573 aa		32.11	■■■□□ 2.73
SYBU-238	ENST00000534578	WRN	Q14191	1432 aa	Predicted RBP eCLIP	32.1	■■■□□ 2.73
SYBU-238	ENST00000534578	TOP2B	Q02880	1626 aa		32.1	■■■□□ 2.73
SYBU-238	ENST00000534578	ADAMTS12	P58397	1594 aa		31.88	■■■□□ 2.69
SYBU-238	ENST00000534578	GRIN2A	Q12879	1464 aa		31.87	■■■□□ 2.69
SYBU-238	ENST00000534578	FHAD1	B1AJZ9	1412 aa		31.8	■■■□□ 2.68
SYBU-238	ENST00000534578	ERICH3	Q5RHP9	1530 aa		31.8	■■■□□ 2.68
SYBU-238	ENST00000534578	NUP160	Q12769	1436 aa		31.77	■■■□□ 2.68
SYBU-238	ENST00000534578	CEP170	Q5SW79	1584 aa		31.76	■■■□□ 2.67
SYBU-238	ENST00000534578	TRH	P20396	242 aa	Predicted RBP	31.7	■■■□□ 2.67
SYBU-238	ENST00000534578	ERCC6L2	Q5T890	1561 aa		31.67	■■■□□ 2.66
SYBU-238	ENST00000534578	SHROOM2	Q13796	1616 aa		31.61	■■■□□ 2.65
SYBU-238	ENST00000534578	IGF1R	P08069	1367 aa		31.47	■■■□□ 2.63
SYBU-238	ENST00000534578	KIF27	Q86VH2	1401 aa		31.46	■■■□□ 2.63
SYBU-238	ENST00000534578	PRG4	Q92954	1404 aa	Predicted RBP	31.44	■■■□□ 2.62
SYBU-238	ENST00000534578	JPH4	Q96JJ6	628 aa		31.44	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms