RNA–Protein interactions for RNA: ENST00000534562.1

SWAP70-206, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 5

Gene SWAP70, Length 977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-206ENST00000534562 NISCHQ9Y2I1 1504 aa20.59■□□□□ 0.89
SWAP70-206ENST00000534562 ABCC9O60706 1549 aa19.64■□□□□ 0.73
SWAP70-206ENST00000534562 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
SWAP70-206ENST00000534562 CCDC180Q9P1Z9 1646 aa18.83■□□□□ 0.61
SWAP70-206ENST00000534562 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
SWAP70-206ENST00000534562 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
SWAP70-206ENST00000534562 DNAJC5Q9H3Z4 198 aa18.09■□□□□ 0.49
SWAP70-206ENST00000534562 NACADO15069 1562 aa17.98■□□□□ 0.47
SWAP70-206ENST00000534562 UNC13AQ9UPW8 1703 aa17.91■□□□□ 0.46
SWAP70-206ENST00000534562 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
SWAP70-206ENST00000534562 DCAF8L2P0C7V8 631 aa17.79■□□□□ 0.44
SWAP70-206ENST00000534562 CECR2Q9BXF3 1484 aa17.75■□□□□ 0.43
SWAP70-206ENST00000534562 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
SWAP70-206ENST00000534562 EIF4G1Q04637 1599 aaKnown RBP17.45■□□□□ 0.38
SWAP70-206ENST00000534562 SHROOM4Q9ULL8 1493 aa17.44■□□□□ 0.38
SWAP70-206ENST00000534562 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
SWAP70-206ENST00000534562 CUX2O14529 1486 aa17.22■□□□□ 0.35
SWAP70-206ENST00000534562 SCRIBQ14160 1630 aa17.16■□□□□ 0.34
SWAP70-206ENST00000534562 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
SWAP70-206ENST00000534562 ERCC6Q03468 1493 aa17.02■□□□□ 0.32
SWAP70-206ENST00000534562 DCAF1Q9Y4B6 1507 aa16.92■□□□□ 0.3
SWAP70-206ENST00000534562 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
SWAP70-206ENST00000534562 NESP48681 1621 aa16.64■□□□□ 0.25
SWAP70-206ENST00000534562 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
SWAP70-206ENST00000534562 NCAPD3P42695 1498 aa16.59■□□□□ 0.25
SWAP70-206ENST00000534562 SMARCA2P51531 1590 aa16.5■□□□□ 0.23
SWAP70-206ENST00000534562 ATAD2BQ9ULI0 1458 aa16.45■□□□□ 0.22
SWAP70-206ENST00000534562 HMGXB3Q12766 1538 aa16.41■□□□□ 0.22
SWAP70-206ENST00000534562 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
SWAP70-206ENST00000534562 BAZ1AQ9NRL2 1556 aaPredicted RBP16.37■□□□□ 0.21
SWAP70-206ENST00000534562 LAMC3Q9Y6N6 1575 aa16.37■□□□□ 0.21
SWAP70-206ENST00000534562 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
SWAP70-206ENST00000534562 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
SWAP70-206ENST00000534562 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
SWAP70-206ENST00000534562 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
SWAP70-206ENST00000534562 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
SWAP70-206ENST00000534562 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
SWAP70-206ENST00000534562 RIMBP3CA6NJZ7 1639 aa16.21■□□□□ 0.19
SWAP70-206ENST00000534562 RIMBP3BA6NNM3 1639 aa16.21■□□□□ 0.19
SWAP70-206ENST00000534562 RIMBP3Q9UFD9 1639 aa16.21■□□□□ 0.19
SWAP70-206ENST00000534562 WDR62O43379 1518 aa16.2■□□□□ 0.18
SWAP70-206ENST00000534562 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
SWAP70-206ENST00000534562 PEG3Q9GZU2 1588 aa16.06■□□□□ 0.16
SWAP70-206ENST00000534562 ARHGEF11O15085 1522 aa16.06■□□□□ 0.16
SWAP70-206ENST00000534562 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
SWAP70-206ENST00000534562 CEP164Q9UPV0 1460 aa16.01■□□□□ 0.15
SWAP70-206ENST00000534562 CYB5RLQ6IPT4 315 aa16■□□□□ 0.15
SWAP70-206ENST00000534562 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
SWAP70-206ENST00000534562 MROH2BQ7Z745 1585 aa15.87■□□□□ 0.13
SWAP70-206ENST00000534562 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
SWAP70-206ENST00000534562 URB2Q14146 1524 aaKnown RBP15.83■□□□□ 0.12
SWAP70-206ENST00000534562 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
SWAP70-206ENST00000534562 CFTRP13569 1480 aa15.71■□□□□ 0.1
SWAP70-206ENST00000534562 CHD1O14646 1710 aa15.7■□□□□ 0.1
SWAP70-206ENST00000534562 IFT140Q96RY7 1462 aa15.7■□□□□ 0.1
SWAP70-206ENST00000534562 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
SWAP70-206ENST00000534562 WIZO95785 1651 aa15.67■□□□□ 0.1
SWAP70-206ENST00000534562 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
SWAP70-206ENST00000534562 ILDR1Q86SU0 546 aaPredicted RBP15.64■□□□□ 0.09
SWAP70-206ENST00000534562 FBLN2P98095 1184 aa15.61■□□□□ 0.09
SWAP70-206ENST00000534562 AQRO60306 1485 aaKnown RBP eCLIP15.52■□□□□ 0.08
SWAP70-206ENST00000534562 TOPBP1Q92547 1522 aa15.52■□□□□ 0.07
SWAP70-206ENST00000534562 PRDM2Q13029 1718 aa15.51■□□□□ 0.07
SWAP70-206ENST00000534562 CLASP1Q7Z460 1538 aa15.47■□□□□ 0.07
SWAP70-206ENST00000534562 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
SWAP70-206ENST00000534562 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
SWAP70-206ENST00000534562 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
SWAP70-206ENST00000534562 TOP2AP11388 1531 aaKnown RBP15.39■□□□□ 0.05
SWAP70-206ENST00000534562 DNMBPQ6XZF7 1577 aa15.39■□□□□ 0.05
SWAP70-206ENST00000534562 GAPVD1Q14C86 1478 aa15.38■□□□□ 0.05
SWAP70-206ENST00000534562 SNAPC4Q5SXM2 1469 aa15.35■□□□□ 0.05
SWAP70-206ENST00000534562 CHMP7Q8WUX9 453 aaPredicted RBP15.34■□□□□ 0.05
SWAP70-206ENST00000534562 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
SWAP70-206ENST00000534562 TDRD9Q8NDG6 1382 aaKnown RBP15.3■□□□□ 0.04
SWAP70-206ENST00000534562 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.04
SWAP70-206ENST00000534562 KDM4FA0A1W2PPD8 638 aa15.27■□□□□ 0.04
SWAP70-206ENST00000534562 MAGI1Q96QZ7 1491 aaPredicted RBP15.25■□□□□ 0.03
SWAP70-206ENST00000534562 KIF13AQ9H1H9 1805 aa15.24■□□□□ 0.03
SWAP70-206ENST00000534562 CCDC88BA6NC98 1476 aa15.22■□□□□ 0.03
SWAP70-206ENST00000534562 SYNJ2O15056 1496 aa15.22■□□□□ 0.03
SWAP70-206ENST00000534562 SOGA1O94964 1423 aa15.22■□□□□ 0.03
SWAP70-206ENST00000534562 WDR97A6NE52 1622 aa15.21■□□□□ 0.02
SWAP70-206ENST00000534562 ERCC6L2Q5T890 1561 aa15.19■□□□□ 0.02
SWAP70-206ENST00000534562 GRIN2BQ13224 1484 aa15.18■□□□□ 0.02
SWAP70-206ENST00000534562 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
SWAP70-206ENST00000534562 KDM6BO15054 1643 aa15.1■□□□□ 0.01
SWAP70-206ENST00000534562 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
SWAP70-206ENST00000534562 FAM69CQ0P6D2 419 aa15.09■□□□□ 0.01
SWAP70-206ENST00000534562 CEP170Q5SW79 1584 aa15.07■□□□□ 0
SWAP70-206ENST00000534562 HECW2Q9P2P5 1572 aa15.05■□□□□ -0
SWAP70-206ENST00000534562 ABCC10Q5T3U5 1492 aa15.04■□□□□ -0
SWAP70-206ENST00000534562 DIP2BQ9P265 1576 aa15□□□□□ -0.01
SWAP70-206ENST00000534562 ADGRL1O94910 1474 aa14.99□□□□□ -0.01
SWAP70-206ENST00000534562 GRIN2AQ12879 1464 aa14.99□□□□□ -0.01
SWAP70-206ENST00000534562 SHROOM2Q13796 1616 aa14.98□□□□□ -0.01
SWAP70-206ENST00000534562 FBXO41Q8TF61 875 aa14.97□□□□□ -0.01
SWAP70-206ENST00000534562 TSPOAP1O95153 1857 aa14.96□□□□□ -0.01
SWAP70-206ENST00000534562 CUX1P39880 1505 aa14.96□□□□□ -0.02
SWAP70-206ENST00000534562 NPM1P06748 294 aaKnown RBP eCLIP14.95□□□□□ -0.02
SWAP70-206ENST00000534562 MAPKBP1O60336 1514 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms