RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 NISCHQ9Y2I1 1504 aa44.34■■■■■ 4.69
RECQL4-207ENST00000534538 ABCC9O60706 1549 aa39.8■■■■□ 3.96
RECQL4-207ENST00000534538 CCDC180Q9P1Z9 1646 aa39.75■■■■□ 3.95
RECQL4-207ENST00000534538 RB1CC1Q8TDY2 1594 aa37.89■■■■□ 3.66
RECQL4-207ENST00000534538 NACADO15069 1562 aa37.65■■■■□ 3.62
RECQL4-207ENST00000534538 DCAF8L2P0C7V8 631 aa37.44■■■■□ 3.58
RECQL4-207ENST00000534538 DNAJC5BQ9UF47 199 aa37.44■■■■□ 3.58
RECQL4-207ENST00000534538 MYO15BQ96JP2 1530 aa37.17■■■■□ 3.54
RECQL4-207ENST00000534538 PABPN1Q86U42 306 aaKnown RBP eCLIP37.08■■■■□ 3.53
RECQL4-207ENST00000534538 UNC13AQ9UPW8 1703 aa36.93■■■■□ 3.5
RECQL4-207ENST00000534538 BICRAQ9NZM4 1560 aa36.77■■■■□ 3.48
RECQL4-207ENST00000534538 ZCCHC6Q5VYS8 1495 aaKnown RBP36.71■■■■□ 3.47
RECQL4-207ENST00000534538 DCAF1Q9Y4B6 1507 aa36.66■■■■□ 3.46
RECQL4-207ENST00000534538 SHROOM4Q9ULL8 1493 aa36.34■■■■□ 3.41
RECQL4-207ENST00000534538 SCRIBQ14160 1630 aa36.16■■■■□ 3.38
RECQL4-207ENST00000534538 CC2D2AQ9P2K1 1620 aa35.94■■■■□ 3.34
RECQL4-207ENST00000534538 CECR2Q9BXF3 1484 aa35.88■■■■□ 3.33
RECQL4-207ENST00000534538 EIF4G1Q04637 1599 aaKnown RBP35.87■■■■□ 3.33
RECQL4-207ENST00000534538 NCAPD3P42695 1498 aa34.8■■■■□ 3.16
RECQL4-207ENST00000534538 ATAD2BQ9ULI0 1458 aa34.65■■■■□ 3.14
RECQL4-207ENST00000534538 SMARCA4P51532 1647 aa34.54■■■■□ 3.12
RECQL4-207ENST00000534538 SMARCA2P51531 1590 aa34.53■■■■□ 3.12
RECQL4-207ENST00000534538 HMGXB3Q12766 1538 aa34.47■■■■□ 3.11
RECQL4-207ENST00000534538 DNAJC5Q9H3Z4 198 aa34.45■■■■□ 3.11
RECQL4-207ENST00000534538 BAZ1AQ9NRL2 1556 aaPredicted RBP34.4■■■■□ 3.1
RECQL4-207ENST00000534538 CUX2O14529 1486 aa34.37■■■■□ 3.09
RECQL4-207ENST00000534538 ERCC6Q03468 1493 aa34.37■■■■□ 3.09
RECQL4-207ENST00000534538 BAZ1BQ9UIG0 1483 aaKnown RBP34.28■■■■□ 3.08
RECQL4-207ENST00000534538 PEG3Q9GZU2 1588 aa34.27■■■■□ 3.08
RECQL4-207ENST00000534538 NESP48681 1621 aa34.16■■■■□ 3.06
RECQL4-207ENST00000534538 MROH2BQ7Z745 1585 aa34.13■■■■□ 3.05
RECQL4-207ENST00000534538 LAMC3Q9Y6N6 1575 aa33.96■■■■□ 3.03
RECQL4-207ENST00000534538 PDS5BQ9NTI5 1447 aa33.81■■■■□ 3
RECQL4-207ENST00000534538 THOC2Q8NI27 1593 aaKnown RBP33.81■■■■□ 3
RECQL4-207ENST00000534538 CADPSQ9ULU8 1353 aa33.73■■■□□ 2.99
RECQL4-207ENST00000534538 WIZO95785 1651 aa33.68■■■□□ 2.98
RECQL4-207ENST00000534538 KIF21AQ7Z4S6 1674 aa33.67■■■□□ 2.98
RECQL4-207ENST00000534538 MRC2Q9UBG0 1479 aa33.47■■■□□ 2.95
RECQL4-207ENST00000534538 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.95
RECQL4-207ENST00000534538 WDR62O43379 1518 aa33.38■■■□□ 2.93
RECQL4-207ENST00000534538 CFTRP13569 1480 aa33.32■■■□□ 2.92
RECQL4-207ENST00000534538 CEP164Q9UPV0 1460 aa33.32■■■□□ 2.92
RECQL4-207ENST00000534538 FANCD2Q9BXW9 1451 aa33.3■■■□□ 2.92
RECQL4-207ENST00000534538 TOP2AP11388 1531 aaKnown RBP33.29■■■□□ 2.92
RECQL4-207ENST00000534538 URB2Q14146 1524 aaKnown RBP33.01■■■□□ 2.87
RECQL4-207ENST00000534538 CCDC88BA6NC98 1476 aa32.95■■■□□ 2.87
RECQL4-207ENST00000534538 PRDM2Q13029 1718 aa32.86■■■□□ 2.85
RECQL4-207ENST00000534538 OSCARQ8IYS5 282 aa32.85■■■□□ 2.85
RECQL4-207ENST00000534538 TRIM41Q8WV44 630 aa32.83■■■□□ 2.85
RECQL4-207ENST00000534538 IFT140Q96RY7 1462 aa32.69■■■□□ 2.82
RECQL4-207ENST00000534538 TOPBP1Q92547 1522 aa32.67■■■□□ 2.82
RECQL4-207ENST00000534538 ABCC8Q09428 1581 aa32.65■■■□□ 2.82
RECQL4-207ENST00000534538 ZNF608Q9ULD9 1512 aaPredicted RBP32.61■■■□□ 2.81
RECQL4-207ENST00000534538 DNMBPQ6XZF7 1577 aa32.52■■■□□ 2.8
RECQL4-207ENST00000534538 EIF4G3O43432 1585 aaKnown RBP32.37■■■□□ 2.77
RECQL4-207ENST00000534538 TARBP1Q13395 1621 aaKnown RBP32.36■■■□□ 2.77
RECQL4-207ENST00000534538 AQRO60306 1485 aaKnown RBP eCLIP32.34■■■□□ 2.772e-8■■■■□ 25.4
RECQL4-207ENST00000534538 POLA1P09884 1462 aaPredicted RBP32.32■■■□□ 2.76
RECQL4-207ENST00000534538 RIMBP3CA6NJZ7 1639 aa32.29■■■□□ 2.76
RECQL4-207ENST00000534538 RIMBP3BA6NNM3 1639 aa32.29■■■□□ 2.76
RECQL4-207ENST00000534538 RIMBP3Q9UFD9 1639 aa32.29■■■□□ 2.76
RECQL4-207ENST00000534538 ARHGEF11O15085 1522 aa32.22■■■□□ 2.75
RECQL4-207ENST00000534538 SOGA1O94964 1423 aa32.21■■■□□ 2.75
RECQL4-207ENST00000534538 RAD54L2Q9Y4B4 1467 aa32.19■■■□□ 2.74
RECQL4-207ENST00000534538 TDRD9Q8NDG6 1382 aaKnown RBP32.14■■■□□ 2.74
RECQL4-207ENST00000534538 FBLN2P98095 1184 aa32.13■■■□□ 2.73
RECQL4-207ENST00000534538 CHD1O14646 1710 aa32.12■■■□□ 2.73
RECQL4-207ENST00000534538 FGD5Q6ZNL6 1462 aa32.1■■■□□ 2.73
RECQL4-207ENST00000534538 CUX1P39880 1505 aa32.06■■■□□ 2.72
RECQL4-207ENST00000534538 WDR97A6NE52 1622 aa32.06■■■□□ 2.72
RECQL4-207ENST00000534538 CYB5RLQ6IPT4 315 aa32.04■■■□□ 2.72
RECQL4-207ENST00000534538 SNAPC4Q5SXM2 1469 aa31.96■■■□□ 2.71
RECQL4-207ENST00000534538 GRIN2BQ13224 1484 aa31.92■■■□□ 2.7
RECQL4-207ENST00000534538 MAGI1Q96QZ7 1491 aaPredicted RBP31.92■■■□□ 2.7
RECQL4-207ENST00000534538 SUPT5HO00267 1087 aaKnown RBP31.92■■■□□ 2.7
RECQL4-207ENST00000534538 CHMP7Q8WUX9 453 aaPredicted RBP31.92■■■□□ 2.7
RECQL4-207ENST00000534538 ARAP1Q96P48 1450 aa31.9■■■□□ 2.7
RECQL4-207ENST00000534538 CLASP1Q7Z460 1538 aa31.82■■■□□ 2.68
RECQL4-207ENST00000534538 SYNJ2O15056 1496 aa31.82■■■□□ 2.68
RECQL4-207ENST00000534538 SYNJ1O43426 1573 aa31.8■■■□□ 2.68
RECQL4-207ENST00000534538 GAPVD1Q14C86 1478 aa31.79■■■□□ 2.68
RECQL4-207ENST00000534538 ABCA10Q8WWZ4 1543 aa31.77■■■□□ 2.68
RECQL4-207ENST00000534538 PBRM1Q86U86 1689 aa31.69■■■□□ 2.66
RECQL4-207ENST00000534538 TRHP20396 242 aaPredicted RBP31.67■■■□□ 2.66
RECQL4-207ENST00000534538 ABCA5Q8WWZ7 1642 aa31.67■■■□□ 2.66
RECQL4-207ENST00000534538 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
RECQL4-207ENST00000534538 TOP2BQ02880 1626 aa31.54■■■□□ 2.64
RECQL4-207ENST00000534538 BIVM-ERCC5R4GMW8 1640 aa31.53■■■□□ 2.64
RECQL4-207ENST00000534538 GRIN2AQ12879 1464 aa31.49■■■□□ 2.63
RECQL4-207ENST00000534538 ADAMTS12P58397 1594 aa31.42■■■□□ 2.62
RECQL4-207ENST00000534538 FHAD1B1AJZ9 1412 aa31.41■■■□□ 2.62
RECQL4-207ENST00000534538 NUP160Q12769 1436 aa31.41■■■□□ 2.62
RECQL4-207ENST00000534538 ERICH3Q5RHP9 1530 aa31.37■■■□□ 2.61
RECQL4-207ENST00000534538 CEP170Q5SW79 1584 aa31.34■■■□□ 2.61
RECQL4-207ENST00000534538 ERCC6L2Q5T890 1561 aa31.29■■■□□ 2.6
RECQL4-207ENST00000534538 SHROOM2Q13796 1616 aa31.24■■■□□ 2.59
RECQL4-207ENST00000534538 JPH4Q96JJ6 628 aa31.14■■■□□ 2.58
RECQL4-207ENST00000534538 PRG4Q92954 1404 aaPredicted RBP31.11■■■□□ 2.57
RECQL4-207ENST00000534538 IGF1RP08069 1367 aa31.01■■■□□ 2.55
RECQL4-207ENST00000534538 KIF27Q86VH2 1401 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms