RNA–Protein interactions for RNA: ENST00000534512.1

GPA33-203, Transcript of glycoprotein A33, humanhuman

TSL 4

Gene GPA33, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33-203ENST00000534512 NISCHQ9Y2I1 1504 aa16.54■□□□□ 0.24
GPA33-203ENST00000534512 ABCC9O60706 1549 aa14.71□□□□□ -0.05
GPA33-203ENST00000534512 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
GPA33-203ENST00000534512 DCAF8L2P0C7V8 631 aa14.28□□□□□ -0.12
GPA33-203ENST00000534512 RB1CC1Q8TDY2 1594 aa13.96□□□□□ -0.18
GPA33-203ENST00000534512 NACADO15069 1562 aa13.84□□□□□ -0.19
GPA33-203ENST00000534512 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
GPA33-203ENST00000534512 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
GPA33-203ENST00000534512 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
GPA33-203ENST00000534512 SCRIBQ14160 1630 aa13.65□□□□□ -0.22
GPA33-203ENST00000534512 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
GPA33-203ENST00000534512 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
GPA33-203ENST00000534512 BICRAQ9NZM4 1560 aa13.47□□□□□ -0.25
GPA33-203ENST00000534512 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
GPA33-203ENST00000534512 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
GPA33-203ENST00000534512 CC2D2AQ9P2K1 1620 aa13.2□□□□□ -0.3
GPA33-203ENST00000534512 EIF4G1Q04637 1599 aaKnown RBP13.19□□□□□ -0.3
GPA33-203ENST00000534512 CECR2Q9BXF3 1484 aa13.15□□□□□ -0.3
GPA33-203ENST00000534512 SMARCA4P51532 1647 aa12.9□□□□□ -0.34
GPA33-203ENST00000534512 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
GPA33-203ENST00000534512 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
GPA33-203ENST00000534512 ATAD2BQ9ULI0 1458 aa12.81□□□□□ -0.36
GPA33-203ENST00000534512 BAZ1BQ9UIG0 1483 aaKnown RBP12.79□□□□□ -0.36
GPA33-203ENST00000534512 SMARCA2P51531 1590 aa12.79□□□□□ -0.36
GPA33-203ENST00000534512 WIZO95785 1651 aa12.73□□□□□ -0.37
GPA33-203ENST00000534512 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
GPA33-203ENST00000534512 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
GPA33-203ENST00000534512 HMGXB3Q12766 1538 aa12.69□□□□□ -0.38
GPA33-203ENST00000534512 NESP48681 1621 aa12.66□□□□□ -0.38
GPA33-203ENST00000534512 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
GPA33-203ENST00000534512 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
GPA33-203ENST00000534512 SUPT5HO00267 1087 aaKnown RBP12.54□□□□□ -0.4
GPA33-203ENST00000534512 KIF21AQ7Z4S6 1674 aa12.51□□□□□ -0.41
GPA33-203ENST00000534512 TOP2AP11388 1531 aaKnown RBP12.5□□□□□ -0.41
GPA33-203ENST00000534512 LAMC3Q9Y6N6 1575 aa12.48□□□□□ -0.41
GPA33-203ENST00000534512 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
GPA33-203ENST00000534512 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
GPA33-203ENST00000534512 CUX2O14529 1486 aa12.39□□□□□ -0.43
GPA33-203ENST00000534512 CCDC88BA6NC98 1476 aa12.38□□□□□ -0.43
GPA33-203ENST00000534512 CEP164Q9UPV0 1460 aa12.38□□□□□ -0.43
GPA33-203ENST00000534512 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
GPA33-203ENST00000534512 FANCD2Q9BXW9 1451 aa12.37□□□□□ -0.43
GPA33-203ENST00000534512 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
GPA33-203ENST00000534512 CFTRP13569 1480 aa12.3□□□□□ -0.44
GPA33-203ENST00000534512 AEBP2Q6ZN18 517 aaPredicted RBP12.3□□□□□ -0.44
GPA33-203ENST00000534512 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
GPA33-203ENST00000534512 WDR62O43379 1518 aa12.23□□□□□ -0.45
GPA33-203ENST00000534512 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
GPA33-203ENST00000534512 DNAJC5Q9H3Z4 198 aa12.14□□□□□ -0.47
GPA33-203ENST00000534512 TOPBP1Q92547 1522 aa12.14□□□□□ -0.47
GPA33-203ENST00000534512 DNMBPQ6XZF7 1577 aa12.11□□□□□ -0.47
GPA33-203ENST00000534512 FBLN2P98095 1184 aa12.11□□□□□ -0.47
GPA33-203ENST00000534512 ZNF608Q9ULD9 1512 aaPredicted RBP12.08□□□□□ -0.48
GPA33-203ENST00000534512 RAD54L2Q9Y4B4 1467 aa12.07□□□□□ -0.48
GPA33-203ENST00000534512 IFT140Q96RY7 1462 aa12.06□□□□□ -0.48
GPA33-203ENST00000534512 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
GPA33-203ENST00000534512 FGD5Q6ZNL6 1462 aa12.04□□□□□ -0.48
GPA33-203ENST00000534512 TRIM41Q8WV44 630 aa12.04□□□□□ -0.48
GPA33-203ENST00000534512 EIF4G3O43432 1585 aaKnown RBP12.03□□□□□ -0.48
GPA33-203ENST00000534512 SOGA1O94964 1423 aa12.03□□□□□ -0.48
GPA33-203ENST00000534512 AQRO60306 1485 aaKnown RBP eCLIP12.02□□□□□ -0.48
GPA33-203ENST00000534512 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.48
GPA33-203ENST00000534512 CUX1P39880 1505 aa12.02□□□□□ -0.48
GPA33-203ENST00000534512 TDRD9Q8NDG6 1382 aaKnown RBP12.02□□□□□ -0.49
GPA33-203ENST00000534512 OSCARQ8IYS5 282 aa11.97□□□□□ -0.49
GPA33-203ENST00000534512 TARBP1Q13395 1621 aaKnown RBP11.96□□□□□ -0.5
GPA33-203ENST00000534512 CHD1O14646 1710 aa11.94□□□□□ -0.5
GPA33-203ENST00000534512 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
GPA33-203ENST00000534512 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
GPA33-203ENST00000534512 SNAPC4Q5SXM2 1469 aa11.92□□□□□ -0.5
GPA33-203ENST00000534512 CHMP7Q8WUX9 453 aaPredicted RBP11.91□□□□□ -0.5
GPA33-203ENST00000534512 PBRM1Q86U86 1689 aa11.89□□□□□ -0.51
GPA33-203ENST00000534512 GAPVD1Q14C86 1478 aa11.86□□□□□ -0.51
GPA33-203ENST00000534512 WDR97A6NE52 1622 aa11.86□□□□□ -0.51
GPA33-203ENST00000534512 TOP2BQ02880 1626 aa11.86□□□□□ -0.51
GPA33-203ENST00000534512 BIVM-ERCC5R4GMW8 1640 aa11.86□□□□□ -0.51
GPA33-203ENST00000534512 GRIN2BQ13224 1484 aa11.84□□□□□ -0.51
GPA33-203ENST00000534512 ABCA10Q8WWZ4 1543 aa11.81□□□□□ -0.52
GPA33-203ENST00000534512 RIMBP3CA6NJZ7 1639 aa11.8□□□□□ -0.52
GPA33-203ENST00000534512 RIMBP3BA6NNM3 1639 aa11.8□□□□□ -0.52
GPA33-203ENST00000534512 RIMBP3Q9UFD9 1639 aa11.8□□□□□ -0.52
GPA33-203ENST00000534512 ABCA5Q8WWZ7 1642 aa11.79□□□□□ -0.52
GPA33-203ENST00000534512 CYB5RLQ6IPT4 315 aa11.79□□□□□ -0.52
GPA33-203ENST00000534512 MAGI1Q96QZ7 1491 aaPredicted RBP11.78□□□□□ -0.52
GPA33-203ENST00000534512 TTBK1Q5TCY1 1321 aaPredicted RBP11.78□□□□□ -0.52
GPA33-203ENST00000534512 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
GPA33-203ENST00000534512 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
GPA33-203ENST00000534512 ADAMTS12P58397 1594 aa11.73□□□□□ -0.53
GPA33-203ENST00000534512 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.53
GPA33-203ENST00000534512 GRIN2AQ12879 1464 aa11.7□□□□□ -0.54
GPA33-203ENST00000534512 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
GPA33-203ENST00000534512 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
GPA33-203ENST00000534512 CHIC1Q5VXU3 224 aa11.69□□□□□ -0.54
GPA33-203ENST00000534512 FAM9AQ8IZU1 332 aaPredicted RBP11.69□□□□□ -0.54
GPA33-203ENST00000534512 FHAD1B1AJZ9 1412 aa11.69□□□□□ -0.54
GPA33-203ENST00000534512 CEP170Q5SW79 1584 aa11.67□□□□□ -0.54
GPA33-203ENST00000534512 ERICH3Q5RHP9 1530 aa11.66□□□□□ -0.54
GPA33-203ENST00000534512 CLASP1Q7Z460 1538 aa11.66□□□□□ -0.54
GPA33-203ENST00000534512 ARAP1Q96P48 1450 aa11.65□□□□□ -0.54
GPA33-203ENST00000534512 RANGAP1P46060 587 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms