RNA–Protein interactions for RNA: ENST00000534511.5

DKK3-216, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 4

Gene DKK3, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-216ENST00000534511 NISCHQ9Y2I1 1504 aa46.18■■■■■ 4.98
DKK3-216ENST00000534511 ABCC9O60706 1549 aa42.14■■■■■ 4.34
DKK3-216ENST00000534511 CCDC180Q9P1Z9 1646 aa41.59■■■■■ 4.25
DKK3-216ENST00000534511 DNAJC5BQ9UF47 199 aa39.98■■■■□ 3.99
DKK3-216ENST00000534511 RB1CC1Q8TDY2 1594 aa39.81■■■■□ 3.96
DKK3-216ENST00000534511 NACADO15069 1562 aa39.42■■■■□ 3.9
DKK3-216ENST00000534511 DCAF8L2P0C7V8 631 aa39.17■■■■□ 3.86
DKK3-216ENST00000534511 PABPN1Q86U42 306 aaKnown RBP eCLIP39.17■■■■□ 3.86
DKK3-216ENST00000534511 UNC13AQ9UPW8 1703 aa39.01■■■■□ 3.84
DKK3-216ENST00000534511 BICRAQ9NZM4 1560 aa38.77■■■■□ 3.8
DKK3-216ENST00000534511 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
DKK3-216ENST00000534511 ZCCHC6Q5VYS8 1495 aaKnown RBP38.19■■■■□ 3.7
DKK3-216ENST00000534511 DCAF1Q9Y4B6 1507 aa38.05■■■■□ 3.68
DKK3-216ENST00000534511 SHROOM4Q9ULL8 1493 aa38.03■■■■□ 3.68
DKK3-216ENST00000534511 CC2D2AQ9P2K1 1620 aa38.02■■■■□ 3.68
DKK3-216ENST00000534511 SCRIBQ14160 1630 aa37.98■■■■□ 3.67
DKK3-216ENST00000534511 CECR2Q9BXF3 1484 aa37.96■■■■□ 3.67
DKK3-216ENST00000534511 EIF4G1Q04637 1599 aaKnown RBP37.82■■■■□ 3.65
DKK3-216ENST00000534511 DNAJC5Q9H3Z4 198 aa36.92■■■■□ 3.5
DKK3-216ENST00000534511 NCAPD3P42695 1498 aa36.42■■■■□ 3.42
DKK3-216ENST00000534511 CUX2O14529 1486 aa36.41■■■■□ 3.42
DKK3-216ENST00000534511 ERCC6Q03468 1493 aa36.35■■■■□ 3.41
DKK3-216ENST00000534511 ATAD2BQ9ULI0 1458 aa36.28■■■■□ 3.4
DKK3-216ENST00000534511 SMARCA4P51532 1647 aa36.14■■■■□ 3.38
DKK3-216ENST00000534511 HMGXB3Q12766 1538 aa36.1■■■■□ 3.37
DKK3-216ENST00000534511 NESP48681 1621 aa36.1■■■■□ 3.37
DKK3-216ENST00000534511 SMARCA2P51531 1590 aa36.1■■■■□ 3.37
DKK3-216ENST00000534511 BAZ1BQ9UIG0 1483 aaKnown RBP35.88■■■■□ 3.33
DKK3-216ENST00000534511 BAZ1AQ9NRL2 1556 aaPredicted RBP35.84■■■■□ 3.33
DKK3-216ENST00000534511 THOC2Q8NI27 1593 aaKnown RBP35.8■■■■□ 3.32
DKK3-216ENST00000534511 PEG3Q9GZU2 1588 aa35.75■■■■□ 3.31
DKK3-216ENST00000534511 LAMC3Q9Y6N6 1575 aa35.66■■■■□ 3.3
DKK3-216ENST00000534511 MROH2BQ7Z745 1585 aa35.64■■■■□ 3.3
DKK3-216ENST00000534511 KIF21AQ7Z4S6 1674 aa35.59■■■■□ 3.29
DKK3-216ENST00000534511 PDS5BQ9NTI5 1447 aa35.44■■■■□ 3.26
DKK3-216ENST00000534511 CADPSQ9ULU8 1353 aa35.29■■■■□ 3.24
DKK3-216ENST00000534511 MRC2Q9UBG0 1479 aa35.22■■■■□ 3.23
DKK3-216ENST00000534511 WIZO95785 1651 aa35.19■■■■□ 3.22
DKK3-216ENST00000534511 TRIM41Q8WV44 630 aa35.18■■■■□ 3.22
DKK3-216ENST00000534511 WDR62O43379 1518 aa35.17■■■■□ 3.22
DKK3-216ENST00000534511 CEP164Q9UPV0 1460 aa34.98■■■■□ 3.19
DKK3-216ENST00000534511 FANCD2Q9BXW9 1451 aa34.92■■■■□ 3.18
DKK3-216ENST00000534511 CFTRP13569 1480 aa34.81■■■■□ 3.16
DKK3-216ENST00000534511 URB2Q14146 1524 aaKnown RBP34.71■■■■□ 3.15
DKK3-216ENST00000534511 RSF1Q96T23 1441 aaPredicted RBP34.7■■■■□ 3.15
DKK3-216ENST00000534511 TOP2AP11388 1531 aaKnown RBP34.65■■■■□ 3.14
DKK3-216ENST00000534511 OSCARQ8IYS5 282 aa34.65■■■■□ 3.14
DKK3-216ENST00000534511 PRDM2Q13029 1718 aa34.41■■■■□ 3.1
DKK3-216ENST00000534511 ZNF608Q9ULD9 1512 aaPredicted RBP34.37■■■■□ 3.09
DKK3-216ENST00000534511 RIMBP3CA6NJZ7 1639 aa34.35■■■■□ 3.09
DKK3-216ENST00000534511 RIMBP3BA6NNM3 1639 aa34.35■■■■□ 3.09
DKK3-216ENST00000534511 RIMBP3Q9UFD9 1639 aa34.35■■■■□ 3.09
DKK3-216ENST00000534511 CCDC88BA6NC98 1476 aa34.29■■■■□ 3.08
DKK3-216ENST00000534511 IFT140Q96RY7 1462 aa34.28■■■■□ 3.08
DKK3-216ENST00000534511 TOPBP1Q92547 1522 aa34.22■■■■□ 3.07
DKK3-216ENST00000534511 ARHGEF11O15085 1522 aa34.19■■■■□ 3.06
DKK3-216ENST00000534511 EIF4G3O43432 1585 aaKnown RBP34.13■■■■□ 3.05
DKK3-216ENST00000534511 DNMBPQ6XZF7 1577 aa34.03■■■■□ 3.04
DKK3-216ENST00000534511 ABCC8Q09428 1581 aa33.99■■■■□ 3.03
DKK3-216ENST00000534511 AQRO60306 1485 aaKnown RBP eCLIP33.98■■■■□ 3.03
DKK3-216ENST00000534511 CHD1O14646 1710 aa33.97■■■■□ 3.03
DKK3-216ENST00000534511 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
DKK3-216ENST00000534511 CYB5RLQ6IPT4 315 aa33.94■■■■□ 3.02
DKK3-216ENST00000534511 POLA1P09884 1462 aaPredicted RBP33.85■■■■□ 3.01
DKK3-216ENST00000534511 ARAP1Q96P48 1450 aa33.84■■■■□ 3.01
DKK3-216ENST00000534511 FBLN2P98095 1184 aa33.8■■■■□ 3
DKK3-216ENST00000534511 RAD54L2Q9Y4B4 1467 aa33.77■■■■□ 3
DKK3-216ENST00000534511 TDRD9Q8NDG6 1382 aaKnown RBP33.69■■■□□ 2.98
DKK3-216ENST00000534511 TRHP20396 242 aaPredicted RBP33.68■■■□□ 2.98
DKK3-216ENST00000534511 SOGA1O94964 1423 aa33.64■■■□□ 2.98
DKK3-216ENST00000534511 SNAPC4Q5SXM2 1469 aa33.62■■■□□ 2.97
DKK3-216ENST00000534511 FGD5Q6ZNL6 1462 aa33.58■■■□□ 2.97
DKK3-216ENST00000534511 CLASP1Q7Z460 1538 aa33.55■■■□□ 2.96
DKK3-216ENST00000534511 CUX1P39880 1505 aa33.5■■■□□ 2.95
DKK3-216ENST00000534511 WDR97A6NE52 1622 aa33.48■■■□□ 2.95
DKK3-216ENST00000534511 CHMP7Q8WUX9 453 aaPredicted RBP33.44■■■□□ 2.94
DKK3-216ENST00000534511 MAGI1Q96QZ7 1491 aaPredicted RBP33.44■■■□□ 2.94
DKK3-216ENST00000534511 SYNJ1O43426 1573 aa33.43■■■□□ 2.94
DKK3-216ENST00000534511 GRIN2BQ13224 1484 aa33.4■■■□□ 2.94
DKK3-216ENST00000534511 SYNJ2O15056 1496 aa33.35■■■□□ 2.93
DKK3-216ENST00000534511 PBRM1Q86U86 1689 aa33.29■■■□□ 2.92
DKK3-216ENST00000534511 GAPVD1Q14C86 1478 aa33.25■■■□□ 2.91
DKK3-216ENST00000534511 ABCA5Q8WWZ7 1642 aa33.17■■■□□ 2.9
DKK3-216ENST00000534511 ABCA10Q8WWZ4 1543 aa33.13■■■□□ 2.89
DKK3-216ENST00000534511 ERCC6L2Q5T890 1561 aa33.08■■■□□ 2.89
DKK3-216ENST00000534511 GRIN2AQ12879 1464 aa33■■■□□ 2.87
DKK3-216ENST00000534511 AEBP2Q6ZN18 517 aaPredicted RBP32.98■■■□□ 2.87
DKK3-216ENST00000534511 ADAMTS12P58397 1594 aa32.96■■■□□ 2.87
DKK3-216ENST00000534511 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
DKK3-216ENST00000534511 NUP160Q12769 1436 aa32.91■■■□□ 2.86
DKK3-216ENST00000534511 WRNQ14191 1432 aaPredicted RBP eCLIP32.87■■■□□ 2.85
DKK3-216ENST00000534511 SHROOM2Q13796 1616 aa32.82■■■□□ 2.84
DKK3-216ENST00000534511 SUPT5HO00267 1087 aaKnown RBP32.82■■■□□ 2.84
DKK3-216ENST00000534511 BIVM-ERCC5R4GMW8 1640 aa32.8■■■□□ 2.84
DKK3-216ENST00000534511 TOP2BQ02880 1626 aa32.79■■■□□ 2.84
DKK3-216ENST00000534511 FHAD1B1AJZ9 1412 aa32.77■■■□□ 2.84
DKK3-216ENST00000534511 ERICH3Q5RHP9 1530 aa32.68■■■□□ 2.82
DKK3-216ENST00000534511 KIF13AQ9H1H9 1805 aa32.65■■■□□ 2.82
DKK3-216ENST00000534511 PRG4Q92954 1404 aaPredicted RBP32.62■■■□□ 2.81
DKK3-216ENST00000534511 JPH4Q96JJ6 628 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms