RNA–Protein interactions for RNA: ENST00000534495.1

LMNB2-206, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-206ENST00000534495 NISCHQ9Y2I1 1504 aa52.56■■■■■ 6
LMNB2-206ENST00000534495 CCDC180Q9P1Z9 1646 aa46.91■■■■■ 5.1
LMNB2-206ENST00000534495 ABCC9O60706 1549 aa46.2■■■■■ 4.99
LMNB2-206ENST00000534495 RB1CC1Q8TDY2 1594 aa44.3■■■■■ 4.68
LMNB2-206ENST00000534495 NACADO15069 1562 aa44.17■■■■■ 4.66
LMNB2-206ENST00000534495 DCAF8L2P0C7V8 631 aa43.98■■■■■ 4.63
LMNB2-206ENST00000534495 MYO15BQ96JP2 1530 aa43.8■■■■■ 4.6
LMNB2-206ENST00000534495 ZCCHC6Q5VYS8 1495 aaKnown RBP43.7■■■■■ 4.59
LMNB2-206ENST00000534495 DCAF1Q9Y4B6 1507 aa43.48■■■■■ 4.55
LMNB2-206ENST00000534495 UNC13AQ9UPW8 1703 aa43.39■■■■■ 4.54
LMNB2-206ENST00000534495 PABPN1Q86U42 306 aaKnown RBP eCLIP43.09■■■■■ 4.49
LMNB2-206ENST00000534495 BICRAQ9NZM4 1560 aa43.01■■■■■ 4.48
LMNB2-206ENST00000534495 DNAJC5BQ9UF47 199 aa42.77■■■■■ 4.44
LMNB2-206ENST00000534495 SCRIBQ14160 1630 aa42.74■■■■■ 4.43
LMNB2-206ENST00000534495 SHROOM4Q9ULL8 1493 aa42.49■■■■■ 4.39
LMNB2-206ENST00000534495 EIF4G1Q04637 1599 aaKnown RBP41.88■■■■■ 4.29
LMNB2-206ENST00000534495 CC2D2AQ9P2K1 1620 aa41.81■■■■■ 4.28
LMNB2-206ENST00000534495 CECR2Q9BXF3 1484 aa41.55■■■■■ 4.24
LMNB2-206ENST00000534495 SMARCA4P51532 1647 aa40.86■■■■■ 4.13
LMNB2-206ENST00000534495 NCAPD3P42695 1498 aa40.76■■■■■ 4.12
LMNB2-206ENST00000534495 BAZ1AQ9NRL2 1556 aaPredicted RBP40.75■■■■■ 4.11
LMNB2-206ENST00000534495 ATAD2BQ9ULI0 1458 aa40.72■■■■■ 4.11
LMNB2-206ENST00000534495 SMARCA2P51531 1590 aa40.65■■■■■ 4.1
LMNB2-206ENST00000534495 HMGXB3Q12766 1538 aa40.52■■■■■ 4.08
LMNB2-206ENST00000534495 MROH2BQ7Z745 1585 aa40.5■■■■■ 4.07
LMNB2-206ENST00000534495 PEG3Q9GZU2 1588 aa40.49■■■■■ 4.07
LMNB2-206ENST00000534495 BAZ1BQ9UIG0 1483 aaKnown RBP40.35■■■■■ 4.05
LMNB2-206ENST00000534495 WIZO95785 1651 aa40.06■■■■■ 4
LMNB2-206ENST00000534495 NESP48681 1621 aa39.89■■■■□ 3.98
LMNB2-206ENST00000534495 RSF1Q96T23 1441 aaPredicted RBP39.89■■■■□ 3.98
LMNB2-206ENST00000534495 ERCC6Q03468 1493 aa39.82■■■■□ 3.97
LMNB2-206ENST00000534495 LAMC3Q9Y6N6 1575 aa39.75■■■■□ 3.95
LMNB2-206ENST00000534495 TOP2AP11388 1531 aaKnown RBP39.59■■■■□ 3.93
LMNB2-206ENST00000534495 CUX2O14529 1486 aa39.57■■■■□ 3.93
LMNB2-206ENST00000534495 CADPSQ9ULU8 1353 aa39.54■■■■□ 3.92
LMNB2-206ENST00000534495 PDS5BQ9NTI5 1447 aa39.46■■■■□ 3.91
LMNB2-206ENST00000534495 KIF21AQ7Z4S6 1674 aa39.45■■■■□ 3.91
LMNB2-206ENST00000534495 THOC2Q8NI27 1593 aaKnown RBP39.38■■■■□ 3.9
LMNB2-206ENST00000534495 CFTRP13569 1480 aa39.24■■■■□ 3.87
LMNB2-206ENST00000534495 CCDC88BA6NC98 1476 aa39.13■■■■□ 3.85
LMNB2-206ENST00000534495 FANCD2Q9BXW9 1451 aa39.08■■■■□ 3.85
LMNB2-206ENST00000534495 MRC2Q9UBG0 1479 aa39.08■■■■□ 3.85
LMNB2-206ENST00000534495 CEP164Q9UPV0 1460 aa39.06■■■■□ 3.84
LMNB2-206ENST00000534495 WDR62O43379 1518 aa38.99■■■■□ 3.83
LMNB2-206ENST00000534495 PRDM2Q13029 1718 aa38.98■■■■□ 3.83
LMNB2-206ENST00000534495 DNAJC5Q9H3Z4 198 aa38.79■■■■□ 3.8
LMNB2-206ENST00000534495 URB2Q14146 1524 aaKnown RBP38.73■■■■□ 3.79
LMNB2-206ENST00000534495 SUPT5HO00267 1087 aaKnown RBP38.56■■■■□ 3.76
LMNB2-206ENST00000534495 TOPBP1Q92547 1522 aa38.43■■■■□ 3.74
LMNB2-206ENST00000534495 ABCC8Q09428 1581 aa38.4■■■■□ 3.74
LMNB2-206ENST00000534495 DNMBPQ6XZF7 1577 aa38.36■■■■□ 3.73
LMNB2-206ENST00000534495 IFT140Q96RY7 1462 aa38.26■■■■□ 3.72
LMNB2-206ENST00000534495 ZNF608Q9ULD9 1512 aaPredicted RBP38.14■■■■□ 3.7
LMNB2-206ENST00000534495 POLA1P09884 1462 aaPredicted RBP38.08■■■■□ 3.69
LMNB2-206ENST00000534495 TARBP1Q13395 1621 aaKnown RBP38.07■■■■□ 3.68
LMNB2-206ENST00000534495 CUX1P39880 1505 aa38.02■■■■□ 3.68
LMNB2-206ENST00000534495 EIF4G3O43432 1585 aaKnown RBP37.98■■■■□ 3.67
LMNB2-206ENST00000534495 FGD5Q6ZNL6 1462 aa37.92■■■■□ 3.66
LMNB2-206ENST00000534495 RAD54L2Q9Y4B4 1467 aa37.91■■■■□ 3.66
LMNB2-206ENST00000534495 SOGA1O94964 1423 aa37.9■■■■□ 3.66
LMNB2-206ENST00000534495 AQRO60306 1485 aaKnown RBP eCLIP37.87■■■■□ 3.65
LMNB2-206ENST00000534495 OSCARQ8IYS5 282 aa37.85■■■■□ 3.65
LMNB2-206ENST00000534495 WDR97A6NE52 1622 aa37.73■■■■□ 3.63
LMNB2-206ENST00000534495 TDRD9Q8NDG6 1382 aaKnown RBP37.73■■■■□ 3.63
LMNB2-206ENST00000534495 BIVM-ERCC5R4GMW8 1640 aa37.61■■■■□ 3.61
LMNB2-206ENST00000534495 WRNQ14191 1432 aaPredicted RBP eCLIP37.61■■■■□ 3.61
LMNB2-206ENST00000534495 CHD1O14646 1710 aa37.6■■■■□ 3.61
LMNB2-206ENST00000534495 TOP2BQ02880 1626 aa37.6■■■■□ 3.61
LMNB2-206ENST00000534495 SYNJ1O43426 1573 aa37.56■■■■□ 3.6
LMNB2-206ENST00000534495 ABCA10Q8WWZ4 1543 aa37.56■■■■□ 3.6
LMNB2-206ENST00000534495 GRIN2BQ13224 1484 aa37.51■■■■□ 3.59
LMNB2-206ENST00000534495 SNAPC4Q5SXM2 1469 aa37.5■■■■□ 3.59
LMNB2-206ENST00000534495 GAPVD1Q14C86 1478 aa37.46■■■■□ 3.59
LMNB2-206ENST00000534495 ABCA5Q8WWZ7 1642 aa37.46■■■■□ 3.59
LMNB2-206ENST00000534495 PBRM1Q86U86 1689 aa37.45■■■■□ 3.59
LMNB2-206ENST00000534495 MAGI1Q96QZ7 1491 aaPredicted RBP37.45■■■■□ 3.59
LMNB2-206ENST00000534495 FBLN2P98095 1184 aa37.44■■■■□ 3.58
LMNB2-206ENST00000534495 RIMBP3CA6NJZ7 1639 aa37.32■■■■□ 3.57
LMNB2-206ENST00000534495 RIMBP3BA6NNM3 1639 aa37.32■■■■□ 3.57
LMNB2-206ENST00000534495 RIMBP3Q9UFD9 1639 aa37.32■■■■□ 3.57
LMNB2-206ENST00000534495 SYNJ2O15056 1496 aa37.31■■■■□ 3.56
LMNB2-206ENST00000534495 CHMP7Q8WUX9 453 aaPredicted RBP37.3■■■■□ 3.56
LMNB2-206ENST00000534495 TRIM41Q8WV44 630 aa37.3■■■■□ 3.56
LMNB2-206ENST00000534495 ARHGEF11O15085 1522 aa37.26■■■■□ 3.56
LMNB2-206ENST00000534495 CLASP1Q7Z460 1538 aa37.16■■■■□ 3.54
LMNB2-206ENST00000534495 ADAMTS12P58397 1594 aa37.1■■■■□ 3.53
LMNB2-206ENST00000534495 ERICH3Q5RHP9 1530 aa37.1■■■■□ 3.53
LMNB2-206ENST00000534495 GRIN2AQ12879 1464 aa37.02■■■■□ 3.52
LMNB2-206ENST00000534495 FHAD1B1AJZ9 1412 aa37.02■■■■□ 3.52
LMNB2-206ENST00000534495 ARAP1Q96P48 1450 aa36.94■■■■□ 3.5
LMNB2-206ENST00000534495 CYB5RLQ6IPT4 315 aa36.91■■■■□ 3.5
LMNB2-206ENST00000534495 NUP160Q12769 1436 aa36.88■■■■□ 3.49
LMNB2-206ENST00000534495 CEP170Q5SW79 1584 aa36.87■■■■□ 3.49
LMNB2-206ENST00000534495 KIF27Q86VH2 1401 aa36.84■■■■□ 3.49
LMNB2-206ENST00000534495 IGF1RP08069 1367 aa36.77■■■■□ 3.48
LMNB2-206ENST00000534495 CUL7Q14999 1698 aa36.7■■■■□ 3.47
LMNB2-206ENST00000534495 SHROOM2Q13796 1616 aa36.68■■■■□ 3.46
LMNB2-206ENST00000534495 ERCC6L2Q5T890 1561 aa36.62■■■■□ 3.45
LMNB2-206ENST00000534495 RUSC2Q8N2Y8 1516 aa36.57■■■■□ 3.44
LMNB2-206ENST00000534495 CARMIL1Q5VZK9 1371 aa36.52■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms