RNA–Protein interactions for RNA: ENST00000534481.1

ZNF408-205, Transcript of zinc finger protein 408, humanhuman

TSL 4

Gene ZNF408, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408-205ENST00000534481 NISCHQ9Y2I1 1504 aa43.21■■■■■ 4.51
ZNF408-205ENST00000534481 CCDC180Q9P1Z9 1646 aa38.64■■■■□ 3.78
ZNF408-205ENST00000534481 ABCC9O60706 1549 aa38.27■■■■□ 3.72
ZNF408-205ENST00000534481 RB1CC1Q8TDY2 1594 aa36.61■■■■□ 3.45
ZNF408-205ENST00000534481 NACADO15069 1562 aa36.44■■■■□ 3.42
ZNF408-205ENST00000534481 DCAF8L2P0C7V8 631 aa36.31■■■■□ 3.4
ZNF408-205ENST00000534481 MYO15BQ96JP2 1530 aa36.05■■■■□ 3.36
ZNF408-205ENST00000534481 ZCCHC6Q5VYS8 1495 aaKnown RBP35.9■■■■□ 3.34
ZNF408-205ENST00000534481 UNC13AQ9UPW8 1703 aa35.77■■■■□ 3.32
ZNF408-205ENST00000534481 DCAF1Q9Y4B6 1507 aa35.73■■■■□ 3.31
ZNF408-205ENST00000534481 PABPN1Q86U42 306 aaKnown RBP eCLIP35.67■■■■□ 3.3
ZNF408-205ENST00000534481 DNAJC5BQ9UF47 199 aa35.52■■■■□ 3.28
ZNF408-205ENST00000534481 BICRAQ9NZM4 1560 aa35.5■■■■□ 3.27
ZNF408-205ENST00000534481 SCRIBQ14160 1630 aa35.23■■■■□ 3.23
ZNF408-205ENST00000534481 SHROOM4Q9ULL8 1493 aa35.09■■■■□ 3.21
ZNF408-205ENST00000534481 EIF4G1Q04637 1599 aaKnown RBP34.62■■■■□ 3.13
ZNF408-205ENST00000534481 CC2D2AQ9P2K1 1620 aa34.59■■■■□ 3.13
ZNF408-205ENST00000534481 CECR2Q9BXF3 1484 aa34.44■■■■□ 3.1
ZNF408-205ENST00000534481 SMARCA4P51532 1647 aa33.64■■■□□ 2.98
ZNF408-205ENST00000534481 NCAPD3P42695 1498 aa33.62■■■□□ 2.97
ZNF408-205ENST00000534481 ATAD2BQ9ULI0 1458 aa33.57■■■□□ 2.97
ZNF408-205ENST00000534481 BAZ1AQ9NRL2 1556 aaPredicted RBP33.54■■■□□ 2.96
ZNF408-205ENST00000534481 SMARCA2P51531 1590 aa33.51■■■□□ 2.96
ZNF408-205ENST00000534481 HMGXB3Q12766 1538 aa33.43■■■□□ 2.94
ZNF408-205ENST00000534481 PEG3Q9GZU2 1588 aa33.31■■■□□ 2.92
ZNF408-205ENST00000534481 MROH2BQ7Z745 1585 aa33.29■■■□□ 2.92
ZNF408-205ENST00000534481 BAZ1BQ9UIG0 1483 aaKnown RBP33.28■■■□□ 2.92
ZNF408-205ENST00000534481 ERCC6Q03468 1493 aa33.04■■■□□ 2.88
ZNF408-205ENST00000534481 NESP48681 1621 aa32.97■■■□□ 2.87
ZNF408-205ENST00000534481 WIZO95785 1651 aa32.91■■■□□ 2.86
ZNF408-205ENST00000534481 CUX2O14529 1486 aa32.85■■■□□ 2.85
ZNF408-205ENST00000534481 LAMC3Q9Y6N6 1575 aa32.83■■■□□ 2.85
ZNF408-205ENST00000534481 RSF1Q96T23 1441 aaPredicted RBP32.73■■■□□ 2.83
ZNF408-205ENST00000534481 PDS5BQ9NTI5 1447 aa32.62■■■□□ 2.81
ZNF408-205ENST00000534481 CADPSQ9ULU8 1353 aa32.61■■■□□ 2.81
ZNF408-205ENST00000534481 THOC2Q8NI27 1593 aaKnown RBP32.58■■■□□ 2.81
ZNF408-205ENST00000534481 KIF21AQ7Z4S6 1674 aa32.58■■■□□ 2.81
ZNF408-205ENST00000534481 TOP2AP11388 1531 aaKnown RBP32.54■■■□□ 2.8
ZNF408-205ENST00000534481 DNAJC5Q9H3Z4 198 aa32.38■■■□□ 2.77
ZNF408-205ENST00000534481 CFTRP13569 1480 aa32.32■■■□□ 2.76
ZNF408-205ENST00000534481 MRC2Q9UBG0 1479 aa32.32■■■□□ 2.76
ZNF408-205ENST00000534481 CEP164Q9UPV0 1460 aa32.27■■■□□ 2.76
ZNF408-205ENST00000534481 FANCD2Q9BXW9 1451 aa32.25■■■□□ 2.75
ZNF408-205ENST00000534481 WDR62O43379 1518 aa32.23■■■□□ 2.75
ZNF408-205ENST00000534481 CCDC88BA6NC98 1476 aa32.15■■■□□ 2.74
ZNF408-205ENST00000534481 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
ZNF408-205ENST00000534481 URB2Q14146 1524 aaKnown RBP31.95■■■□□ 2.71
ZNF408-205ENST00000534481 TOPBP1Q92547 1522 aa31.68■■■□□ 2.66
ZNF408-205ENST00000534481 ABCC8Q09428 1581 aa31.64■■■□□ 2.66
ZNF408-205ENST00000534481 DNMBPQ6XZF7 1577 aa31.61■■■□□ 2.65
ZNF408-205ENST00000534481 IFT140Q96RY7 1462 aa31.6■■■□□ 2.65
ZNF408-205ENST00000534481 SUPT5HO00267 1087 aaKnown RBP31.55■■■□□ 2.64
ZNF408-205ENST00000534481 ZNF608Q9ULD9 1512 aaPredicted RBP31.49■■■□□ 2.63
ZNF408-205ENST00000534481 OSCARQ8IYS5 282 aa31.39■■■□□ 2.62
ZNF408-205ENST00000534481 POLA1P09884 1462 aaPredicted RBP31.38■■■□□ 2.61
ZNF408-205ENST00000534481 TARBP1Q13395 1621 aaKnown RBP31.38■■■□□ 2.61
ZNF408-205ENST00000534481 EIF4G3O43432 1585 aaKnown RBP31.37■■■□□ 2.61
ZNF408-205ENST00000534481 AQRO60306 1485 aaKnown RBP eCLIP31.27■■■□□ 2.62e-6■■■■□ 20.7
ZNF408-205ENST00000534481 CUX1P39880 1505 aa31.26■■■□□ 2.59
ZNF408-205ENST00000534481 RAD54L2Q9Y4B4 1467 aa31.25■■■□□ 2.59
ZNF408-205ENST00000534481 FGD5Q6ZNL6 1462 aa31.24■■■□□ 2.59
ZNF408-205ENST00000534481 SOGA1O94964 1423 aa31.24■■■□□ 2.59
ZNF408-205ENST00000534481 TRIM41Q8WV44 630 aa31.13■■■□□ 2.57
ZNF408-205ENST00000534481 TDRD9Q8NDG6 1382 aaKnown RBP31.12■■■□□ 2.57
ZNF408-205ENST00000534481 WDR97A6NE52 1622 aa31.11■■■□□ 2.57
ZNF408-205ENST00000534481 CHD1O14646 1710 aa31.07■■■□□ 2.56
ZNF408-205ENST00000534481 FBLN2P98095 1184 aa30.99■■■□□ 2.55
ZNF408-205ENST00000534481 SNAPC4Q5SXM2 1469 aa30.97■■■□□ 2.55
ZNF408-205ENST00000534481 RIMBP3CA6NJZ7 1639 aa30.95■■■□□ 2.55
ZNF408-205ENST00000534481 RIMBP3BA6NNM3 1639 aa30.95■■■□□ 2.55
ZNF408-205ENST00000534481 RIMBP3Q9UFD9 1639 aa30.95■■■□□ 2.55
ZNF408-205ENST00000534481 GRIN2BQ13224 1484 aa30.94■■■□□ 2.54
ZNF408-205ENST00000534481 MAGI1Q96QZ7 1491 aaPredicted RBP30.91■■■□□ 2.54
ZNF408-205ENST00000534481 ABCA10Q8WWZ4 1543 aa30.91■■■□□ 2.54
ZNF408-205ENST00000534481 ARHGEF11O15085 1522 aa30.9■■■□□ 2.54
ZNF408-205ENST00000534481 WRNQ14191 1432 aaPredicted RBP eCLIP30.89■■■□□ 2.53
ZNF408-205ENST00000534481 GAPVD1Q14C86 1478 aa30.88■■■□□ 2.53
ZNF408-205ENST00000534481 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
ZNF408-205ENST00000534481 BIVM-ERCC5R4GMW8 1640 aa30.87■■■□□ 2.53
ZNF408-205ENST00000534481 PBRM1Q86U86 1689 aa30.86■■■□□ 2.53
ZNF408-205ENST00000534481 SYNJ1O43426 1573 aa30.84■■■□□ 2.53
ZNF408-205ENST00000534481 ABCA5Q8WWZ7 1642 aa30.84■■■□□ 2.53
ZNF408-205ENST00000534481 CHMP7Q8WUX9 453 aaPredicted RBP30.82■■■□□ 2.52
ZNF408-205ENST00000534481 SYNJ2O15056 1496 aa30.8■■■□□ 2.52
ZNF408-205ENST00000534481 CLASP1Q7Z460 1538 aa30.71■■■□□ 2.51
ZNF408-205ENST00000534481 CYB5RLQ6IPT4 315 aa30.63■■■□□ 2.49
ZNF408-205ENST00000534481 ARAP1Q96P48 1450 aa30.62■■■□□ 2.49
ZNF408-205ENST00000534481 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
ZNF408-205ENST00000534481 GRIN2AQ12879 1464 aa30.55■■■□□ 2.48
ZNF408-205ENST00000534481 ERICH3Q5RHP9 1530 aa30.53■■■□□ 2.48
ZNF408-205ENST00000534481 FHAD1B1AJZ9 1412 aa30.5■■■□□ 2.47
ZNF408-205ENST00000534481 NUP160Q12769 1436 aa30.42■■■□□ 2.46
ZNF408-205ENST00000534481 CEP170Q5SW79 1584 aa30.41■■■□□ 2.46
ZNF408-205ENST00000534481 KIF27Q86VH2 1401 aa30.29■■■□□ 2.44
ZNF408-205ENST00000534481 SHROOM2Q13796 1616 aa30.25■■■□□ 2.43
ZNF408-205ENST00000534481 ERCC6L2Q5T890 1561 aa30.24■■■□□ 2.43
ZNF408-205ENST00000534481 IGF1RP08069 1367 aa30.2■■■□□ 2.43
ZNF408-205ENST00000534481 TRHP20396 242 aaPredicted RBP30.18■■■□□ 2.42
ZNF408-205ENST00000534481 CUL7Q14999 1698 aa30.17■■■□□ 2.42
ZNF408-205ENST00000534481 RUSC2Q8N2Y8 1516 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms