RNA–Protein interactions for RNA: ENST00000534404.1

LRP4-205, Transcript of LDL receptor related protein 4, humanhuman

TSL 5

Gene LRP4, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-205ENST00000534404 NISCHQ9Y2I1 1504 aa80.86■■■■■ 10.53
LRP4-205ENST00000534404 CCDC180Q9P1Z9 1646 aa72.09■■■■■ 9.13
LRP4-205ENST00000534404 ABCC9O60706 1549 aa71.19■■■■■ 8.99
LRP4-205ENST00000534404 RB1CC1Q8TDY2 1594 aa68.19■■■■■ 8.51
LRP4-205ENST00000534404 DCAF8L2P0C7V8 631 aa68.07■■■■■ 8.49
LRP4-205ENST00000534404 NACADO15069 1562 aa67.94■■■■■ 8.47
LRP4-205ENST00000534404 MYO15BQ96JP2 1530 aa67.28■■■■■ 8.36
LRP4-205ENST00000534404 ZCCHC6Q5VYS8 1495 aaKnown RBP67.21■■■■■ 8.35
LRP4-205ENST00000534404 DCAF1Q9Y4B6 1507 aa66.8■■■■■ 8.28
LRP4-205ENST00000534404 UNC13AQ9UPW8 1703 aa66.57■■■■■ 8.25
LRP4-205ENST00000534404 PABPN1Q86U42 306 aaKnown RBP eCLIP66.49■■■■■ 8.23
LRP4-205ENST00000534404 BICRAQ9NZM4 1560 aa66.07■■■■■ 8.17
LRP4-205ENST00000534404 SCRIBQ14160 1630 aa65.84■■■■■ 8.13
LRP4-205ENST00000534404 DNAJC5BQ9UF47 199 aa65.8■■■■■ 8.12
LRP4-205ENST00000534404 SHROOM4Q9ULL8 1493 aa65.31■■■■■ 8.04
LRP4-205ENST00000534404 EIF4G1Q04637 1599 aaKnown RBP64.42■■■■■ 7.9
LRP4-205ENST00000534404 CC2D2AQ9P2K1 1620 aa64.32■■■■■ 7.89
LRP4-205ENST00000534404 CECR2Q9BXF3 1484 aa64.01■■■■■ 7.84
LRP4-205ENST00000534404 SMARCA4P51532 1647 aa62.86■■■■■ 7.65
LRP4-205ENST00000534404 BAZ1AQ9NRL2 1556 aaPredicted RBP62.73■■■■■ 7.63
LRP4-205ENST00000534404 NCAPD3P42695 1498 aa62.69■■■■■ 7.63
LRP4-205ENST00000534404 ATAD2BQ9ULI0 1458 aa62.66■■■■■ 7.62
LRP4-205ENST00000534404 SMARCA2P51531 1590 aa62.58■■■■■ 7.61
LRP4-205ENST00000534404 HMGXB3Q12766 1538 aa62.32■■■■■ 7.57
LRP4-205ENST00000534404 MROH2BQ7Z745 1585 aa62.32■■■■■ 7.57
LRP4-205ENST00000534404 PEG3Q9GZU2 1588 aa62.18■■■■■ 7.54
LRP4-205ENST00000534404 BAZ1BQ9UIG0 1483 aaKnown RBP62.18■■■■■ 7.54
LRP4-205ENST00000534404 WIZO95785 1651 aa61.65■■■■■ 7.46
LRP4-205ENST00000534404 ERCC6Q03468 1493 aa61.46■■■■■ 7.43
LRP4-205ENST00000534404 NESP48681 1621 aa61.41■■■■■ 7.42
LRP4-205ENST00000534404 RSF1Q96T23 1441 aaPredicted RBP61.41■■■■■ 7.42
LRP4-205ENST00000534404 LAMC3Q9Y6N6 1575 aa61.15■■■■■ 7.38
LRP4-205ENST00000534404 TOP2AP11388 1531 aaKnown RBP60.92■■■■■ 7.34
LRP4-205ENST00000534404 CUX2O14529 1486 aa60.9■■■■■ 7.34
LRP4-205ENST00000534404 CADPSQ9ULU8 1353 aa60.89■■■■■ 7.34
LRP4-205ENST00000534404 PDS5BQ9NTI5 1447 aa60.82■■■■■ 7.33
LRP4-205ENST00000534404 KIF21AQ7Z4S6 1674 aa60.64■■■■■ 7.3
LRP4-205ENST00000534404 THOC2Q8NI27 1593 aaKnown RBP60.53■■■■■ 7.28
LRP4-205ENST00000534404 CFTRP13569 1480 aa60.37■■■■■ 7.25
LRP4-205ENST00000534404 CCDC88BA6NC98 1476 aa60.25■■■■■ 7.24
LRP4-205ENST00000534404 FANCD2Q9BXW9 1451 aa60.21■■■■■ 7.23
LRP4-205ENST00000534404 MRC2Q9UBG0 1479 aa60.19■■■■■ 7.23
LRP4-205ENST00000534404 CEP164Q9UPV0 1460 aa60.19■■■■■ 7.23
LRP4-205ENST00000534404 WDR62O43379 1518 aa59.96■■■■■ 7.19
LRP4-205ENST00000534404 PRDM2Q13029 1718 aa59.84■■■■■ 7.17
LRP4-205ENST00000534404 DNAJC5Q9H3Z4 198 aa59.72■■■■■ 7.15
LRP4-205ENST00000534404 SUPT5HO00267 1087 aaKnown RBP59.65■■■■■ 7.14
LRP4-205ENST00000534404 URB2Q14146 1524 aaKnown RBP59.59■■■■■ 7.13
LRP4-205ENST00000534404 TOPBP1Q92547 1522 aa59.15■■■■■ 7.06
LRP4-205ENST00000534404 ABCC8Q09428 1581 aa59.14■■■■■ 7.06
LRP4-205ENST00000534404 DNMBPQ6XZF7 1577 aa59.03■■■■■ 7.04
LRP4-205ENST00000534404 IFT140Q96RY7 1462 aa58.93■■■■■ 7.02
LRP4-205ENST00000534404 ZNF608Q9ULD9 1512 aaPredicted RBP58.71■■■■■ 6.99
LRP4-205ENST00000534404 POLA1P09884 1462 aaPredicted RBP58.61■■■■■ 6.97
LRP4-205ENST00000534404 TARBP1Q13395 1621 aaKnown RBP58.51■■■■■ 6.96
LRP4-205ENST00000534404 CUX1P39880 1505 aa58.49■■■■■ 6.95
LRP4-205ENST00000534404 EIF4G3O43432 1585 aaKnown RBP58.44■■■■■ 6.95
LRP4-205ENST00000534404 SOGA1O94964 1423 aa58.44■■■■■ 6.95
LRP4-205ENST00000534404 FGD5Q6ZNL6 1462 aa58.42■■■■■ 6.94
LRP4-205ENST00000534404 RAD54L2Q9Y4B4 1467 aa58.41■■■■■ 6.94
LRP4-205ENST00000534404 OSCARQ8IYS5 282 aa58.39■■■■■ 6.94
LRP4-205ENST00000534404 AQRO60306 1485 aaKnown RBP eCLIP58.35■■■■■ 6.93
LRP4-205ENST00000534404 TDRD9Q8NDG6 1382 aaKnown RBP58.18■■■■■ 6.9
LRP4-205ENST00000534404 WDR97A6NE52 1622 aa58.01■■■■■ 6.88
LRP4-205ENST00000534404 WRNQ14191 1432 aaPredicted RBP eCLIP57.97■■■■■ 6.87
LRP4-205ENST00000534404 FBLN2P98095 1184 aa57.91■■■■■ 6.86
LRP4-205ENST00000534404 TOP2BQ02880 1626 aa57.84■■■■■ 6.85
LRP4-205ENST00000534404 BIVM-ERCC5R4GMW8 1640 aa57.83■■■■■ 6.85
LRP4-205ENST00000534404 CHD1O14646 1710 aa57.81■■■■■ 6.85
LRP4-205ENST00000534404 SYNJ1O43426 1573 aa57.81■■■■■ 6.84
LRP4-205ENST00000534404 SNAPC4Q5SXM2 1469 aa57.79■■■■■ 6.84
LRP4-205ENST00000534404 ABCA10Q8WWZ4 1543 aa57.78■■■■■ 6.84
LRP4-205ENST00000534404 GRIN2BQ13224 1484 aa57.78■■■■■ 6.84
LRP4-205ENST00000534404 GAPVD1Q14C86 1478 aa57.73■■■■■ 6.83
LRP4-205ENST00000534404 TRIM41Q8WV44 630 aa57.67■■■■■ 6.82
LRP4-205ENST00000534404 MAGI1Q96QZ7 1491 aaPredicted RBP57.66■■■■■ 6.82
LRP4-205ENST00000534404 CHMP7Q8WUX9 453 aaPredicted RBP57.61■■■■■ 6.81
LRP4-205ENST00000534404 PBRM1Q86U86 1689 aa57.61■■■■■ 6.81
LRP4-205ENST00000534404 ABCA5Q8WWZ7 1642 aa57.58■■■■■ 6.81
LRP4-205ENST00000534404 SYNJ2O15056 1496 aa57.46■■■■■ 6.79
LRP4-205ENST00000534404 RIMBP3CA6NJZ7 1639 aa57.43■■■■■ 6.78
LRP4-205ENST00000534404 RIMBP3BA6NNM3 1639 aa57.43■■■■■ 6.78
LRP4-205ENST00000534404 RIMBP3Q9UFD9 1639 aa57.43■■■■■ 6.78
LRP4-205ENST00000534404 ARHGEF11O15085 1522 aa57.35■■■■■ 6.77
LRP4-205ENST00000534404 CLASP1Q7Z460 1538 aa57.14■■■■■ 6.74
LRP4-205ENST00000534404 ERICH3Q5RHP9 1530 aa57.09■■■■■ 6.73
LRP4-205ENST00000534404 ADAMTS12P58397 1594 aa57.09■■■■■ 6.73
LRP4-205ENST00000534404 FHAD1B1AJZ9 1412 aa57.02■■■■■ 6.72
LRP4-205ENST00000534404 GRIN2AQ12879 1464 aa57.02■■■■■ 6.72
LRP4-205ENST00000534404 CYB5RLQ6IPT4 315 aa56.98■■■■■ 6.71
LRP4-205ENST00000534404 ARAP1Q96P48 1450 aa56.83■■■■■ 6.69
LRP4-205ENST00000534404 KIF27Q86VH2 1401 aa56.82■■■■■ 6.69
LRP4-205ENST00000534404 NUP160Q12769 1436 aa56.74■■■■■ 6.67
LRP4-205ENST00000534404 CEP170Q5SW79 1584 aa56.74■■■■■ 6.67
LRP4-205ENST00000534404 IGF1RP08069 1367 aa56.61■■■■■ 6.65
LRP4-205ENST00000534404 CUL7Q14999 1698 aa56.48■■■■■ 6.63
LRP4-205ENST00000534404 SHROOM2Q13796 1616 aa56.35■■■■■ 6.61
LRP4-205ENST00000534404 ERCC6L2Q5T890 1561 aa56.34■■■■■ 6.61
LRP4-205ENST00000534404 CARMIL1Q5VZK9 1371 aa56.31■■■■■ 6.61
LRP4-205ENST00000534404 JPH4Q96JJ6 628 aa56.28■■■■■ 6.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms