RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 NISCHQ9Y2I1 1504 aa38.66■■■■□ 3.78
PAX6-230ENST00000534390 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
PAX6-230ENST00000534390 ABCC9O60706 1549 aa33.91■■■■□ 3.02
PAX6-230ENST00000534390 DCAF8L2P0C7V8 631 aa32.54■■■□□ 2.8
PAX6-230ENST00000534390 RB1CC1Q8TDY2 1594 aa32.51■■■□□ 2.79
PAX6-230ENST00000534390 NACADO15069 1562 aa32.4■■■□□ 2.78
PAX6-230ENST00000534390 ZCCHC6Q5VYS8 1495 aaKnown RBP32.17■■■□□ 2.74
PAX6-230ENST00000534390 MYO15BQ96JP2 1530 aa32.06■■■□□ 2.72
PAX6-230ENST00000534390 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
PAX6-230ENST00000534390 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
PAX6-230ENST00000534390 PABPN1Q86U42 306 aaKnown RBP eCLIP31.68■■■□□ 2.66
PAX6-230ENST00000534390 SCRIBQ14160 1630 aa31.53■■■□□ 2.64
PAX6-230ENST00000534390 BICRAQ9NZM4 1560 aa31.48■■■□□ 2.63
PAX6-230ENST00000534390 DNAJC5BQ9UF47 199 aa31.15■■■□□ 2.58
PAX6-230ENST00000534390 SHROOM4Q9ULL8 1493 aa31.09■■■□□ 2.57
PAX6-230ENST00000534390 EIF4G1Q04637 1599 aaKnown RBP30.7■■■□□ 2.5
PAX6-230ENST00000534390 CC2D2AQ9P2K1 1620 aa30.63■■■□□ 2.49
PAX6-230ENST00000534390 CECR2Q9BXF3 1484 aa30.45■■■□□ 2.47
PAX6-230ENST00000534390 SMARCA4P51532 1647 aa30.07■■■□□ 2.4
PAX6-230ENST00000534390 BAZ1AQ9NRL2 1556 aaPredicted RBP29.99■■■□□ 2.39
PAX6-230ENST00000534390 ATAD2BQ9ULI0 1458 aa29.9■■■□□ 2.38
PAX6-230ENST00000534390 SMARCA2P51531 1590 aa29.88■■■□□ 2.37
PAX6-230ENST00000534390 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
PAX6-230ENST00000534390 MROH2BQ7Z745 1585 aa29.82■■■□□ 2.36
PAX6-230ENST00000534390 HMGXB3Q12766 1538 aa29.74■■■□□ 2.35
PAX6-230ENST00000534390 BAZ1BQ9UIG0 1483 aaKnown RBP29.71■■■□□ 2.35
PAX6-230ENST00000534390 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
PAX6-230ENST00000534390 WIZO95785 1651 aa29.53■■■□□ 2.32
PAX6-230ENST00000534390 RSF1Q96T23 1441 aaPredicted RBP29.41■■■□□ 2.3
PAX6-230ENST00000534390 NESP48681 1621 aa29.29■■■□□ 2.28
PAX6-230ENST00000534390 ERCC6Q03468 1493 aa29.28■■■□□ 2.28
PAX6-230ENST00000534390 TOP2AP11388 1531 aaKnown RBP29.19■■■□□ 2.26
PAX6-230ENST00000534390 LAMC3Q9Y6N6 1575 aa29.14■■■□□ 2.26
PAX6-230ENST00000534390 CADPSQ9ULU8 1353 aa29.02■■■□□ 2.24
PAX6-230ENST00000534390 PDS5BQ9NTI5 1447 aa28.96■■■□□ 2.23
PAX6-230ENST00000534390 KIF21AQ7Z4S6 1674 aa28.96■■■□□ 2.23
PAX6-230ENST00000534390 CUX2O14529 1486 aa28.9■■■□□ 2.22
PAX6-230ENST00000534390 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
PAX6-230ENST00000534390 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
PAX6-230ENST00000534390 CFTRP13569 1480 aa28.8■■■□□ 2.2
PAX6-230ENST00000534390 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
PAX6-230ENST00000534390 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
PAX6-230ENST00000534390 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
PAX6-230ENST00000534390 MRC2Q9UBG0 1479 aa28.7■■■□□ 2.18
PAX6-230ENST00000534390 PRDM2Q13029 1718 aa28.65■■■□□ 2.18
PAX6-230ENST00000534390 WDR62O43379 1518 aa28.57■■■□□ 2.16
PAX6-230ENST00000534390 URB2Q14146 1524 aaKnown RBP28.44■■■□□ 2.14
PAX6-230ENST00000534390 TOPBP1Q92547 1522 aa28.25■■■□□ 2.11
PAX6-230ENST00000534390 DNMBPQ6XZF7 1577 aa28.21■■■□□ 2.11
PAX6-230ENST00000534390 ABCC8Q09428 1581 aa28.2■■■□□ 2.11
PAX6-230ENST00000534390 DNAJC5Q9H3Z4 198 aa28.14■■■□□ 2.1
PAX6-230ENST00000534390 IFT140Q96RY7 1462 aa28.09■■■□□ 2.09
PAX6-230ENST00000534390 ZNF608Q9ULD9 1512 aaPredicted RBP28.01■■■□□ 2.07
PAX6-230ENST00000534390 POLA1P09884 1462 aaPredicted RBP28■■■□□ 2.07
PAX6-230ENST00000534390 CUX1P39880 1505 aa27.99■■■□□ 2.07
PAX6-230ENST00000534390 FGD5Q6ZNL6 1462 aa27.95■■■□□ 2.06
PAX6-230ENST00000534390 TARBP1Q13395 1621 aaKnown RBP27.92■■■□□ 2.06
PAX6-230ENST00000534390 EIF4G3O43432 1585 aaKnown RBP27.91■■■□□ 2.06
PAX6-230ENST00000534390 RAD54L2Q9Y4B4 1467 aa27.91■■■□□ 2.06
PAX6-230ENST00000534390 SOGA1O94964 1423 aa27.89■■■□□ 2.06
PAX6-230ENST00000534390 AQRO60306 1485 aaKnown RBP eCLIP27.84■■■□□ 2.05
PAX6-230ENST00000534390 WRNQ14191 1432 aaPredicted RBP eCLIP27.77■■■□□ 2.04
PAX6-230ENST00000534390 TDRD9Q8NDG6 1382 aaKnown RBP27.77■■■□□ 2.04
PAX6-230ENST00000534390 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
PAX6-230ENST00000534390 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
PAX6-230ENST00000534390 TOP2BQ02880 1626 aa27.7■■■□□ 2.03
PAX6-230ENST00000534390 BIVM-ERCC5R4GMW8 1640 aa27.7■■■□□ 2.03
PAX6-230ENST00000534390 WDR97A6NE52 1622 aa27.69■■■□□ 2.02
PAX6-230ENST00000534390 FBLN2P98095 1184 aa27.63■■■□□ 2.01
PAX6-230ENST00000534390 ABCA10Q8WWZ4 1543 aa27.61■■■□□ 2.01
PAX6-230ENST00000534390 CHD1O14646 1710 aa27.61■■■□□ 2.01
PAX6-230ENST00000534390 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
PAX6-230ENST00000534390 GRIN2BQ13224 1484 aa27.57■■■□□ 2
PAX6-230ENST00000534390 GAPVD1Q14C86 1478 aa27.57■■■□□ 2
PAX6-230ENST00000534390 PBRM1Q86U86 1689 aa27.56■■■□□ 2
PAX6-230ENST00000534390 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
PAX6-230ENST00000534390 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■□□□ 1.99
PAX6-230ENST00000534390 CHMP7Q8WUX9 453 aaPredicted RBP27.46■■□□□ 1.99
PAX6-230ENST00000534390 SYNJ2O15056 1496 aa27.41■■□□□ 1.98
PAX6-230ENST00000534390 TRIM41Q8WV44 630 aa27.35■■□□□ 1.97
PAX6-230ENST00000534390 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
PAX6-230ENST00000534390 RIMBP3CA6NJZ7 1639 aa27.31■■□□□ 1.96
PAX6-230ENST00000534390 RIMBP3BA6NNM3 1639 aa27.31■■□□□ 1.96
PAX6-230ENST00000534390 RIMBP3Q9UFD9 1639 aa27.31■■□□□ 1.96
PAX6-230ENST00000534390 ERICH3Q5RHP9 1530 aa27.28■■□□□ 1.96
PAX6-230ENST00000534390 ARHGEF11O15085 1522 aa27.27■■□□□ 1.96
PAX6-230ENST00000534390 CLASP1Q7Z460 1538 aa27.23■■□□□ 1.95
PAX6-230ENST00000534390 GRIN2AQ12879 1464 aa27.23■■□□□ 1.95
PAX6-230ENST00000534390 FHAD1B1AJZ9 1412 aa27.23■■□□□ 1.95
PAX6-230ENST00000534390 KIF27Q86VH2 1401 aa27.21■■□□□ 1.95
PAX6-230ENST00000534390 CEP170Q5SW79 1584 aa27.11■■□□□ 1.93
PAX6-230ENST00000534390 CYB5RLQ6IPT4 315 aa27.07■■□□□ 1.92
PAX6-230ENST00000534390 NUP160Q12769 1436 aa27.07■■□□□ 1.92
PAX6-230ENST00000534390 IGF1RP08069 1367 aa27.06■■□□□ 1.92
PAX6-230ENST00000534390 CUL7Q14999 1698 aa27.05■■□□□ 1.92
PAX6-230ENST00000534390 ARAP1Q96P48 1450 aa27.04■■□□□ 1.92
PAX6-230ENST00000534390 CARMIL1Q5VZK9 1371 aa26.94■■□□□ 1.9
PAX6-230ENST00000534390 RUSC2Q8N2Y8 1516 aa26.92■■□□□ 1.9
PAX6-230ENST00000534390 ERCC6L2Q5T890 1561 aa26.89■■□□□ 1.9
PAX6-230ENST00000534390 SHROOM2Q13796 1616 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 454 ms