RNA–Protein interactions for RNA: ENST00000534353.5

PAX6-229, Transcript of paired box 6, humanhuman

TSL 4

Gene PAX6, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-229ENST00000534353 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.23
PAX6-229ENST00000534353 ABCC9O60706 1549 aa25.9■■□□□ 1.74
PAX6-229ENST00000534353 CCDC180Q9P1Z9 1646 aa25.8■■□□□ 1.72
PAX6-229ENST00000534353 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
PAX6-229ENST00000534353 DCAF8L2P0C7V8 631 aa24.51■■□□□ 1.51
PAX6-229ENST00000534353 NACADO15069 1562 aa24.44■■□□□ 1.5
PAX6-229ENST00000534353 DNAJC5BQ9UF47 199 aa24.41■■□□□ 1.5
PAX6-229ENST00000534353 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
PAX6-229ENST00000534353 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.45
PAX6-229ENST00000534353 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
PAX6-229ENST00000534353 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
PAX6-229ENST00000534353 BICRAQ9NZM4 1560 aa23.95■■□□□ 1.43
PAX6-229ENST00000534353 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
PAX6-229ENST00000534353 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
PAX6-229ENST00000534353 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
PAX6-229ENST00000534353 CC2D2AQ9P2K1 1620 aa23.35■■□□□ 1.33
PAX6-229ENST00000534353 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
PAX6-229ENST00000534353 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
PAX6-229ENST00000534353 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
PAX6-229ENST00000534353 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
PAX6-229ENST00000534353 SMARCA4P51532 1647 aa22.52■■□□□ 1.2
PAX6-229ENST00000534353 SMARCA2P51531 1590 aa22.44■■□□□ 1.18
PAX6-229ENST00000534353 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
PAX6-229ENST00000534353 HMGXB3Q12766 1538 aa22.39■■□□□ 1.17
PAX6-229ENST00000534353 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
PAX6-229ENST00000534353 BAZ1BQ9UIG0 1483 aaKnown RBP22.32■■□□□ 1.16
PAX6-229ENST00000534353 NESP48681 1621 aa22.31■■□□□ 1.16
PAX6-229ENST00000534353 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
PAX6-229ENST00000534353 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
PAX6-229ENST00000534353 DNAJC5Q9H3Z4 198 aa22.26■■□□□ 1.15
PAX6-229ENST00000534353 CUX2O14529 1486 aa22.21■■□□□ 1.15
PAX6-229ENST00000534353 WIZO95785 1651 aa22.04■■□□□ 1.12
PAX6-229ENST00000534353 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
PAX6-229ENST00000534353 CADPSQ9ULU8 1353 aa21.98■■□□□ 1.11
PAX6-229ENST00000534353 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
PAX6-229ENST00000534353 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.1
PAX6-229ENST00000534353 RSF1Q96T23 1441 aaPredicted RBP21.94■■□□□ 1.1
PAX6-229ENST00000534353 KIF21AQ7Z4S6 1674 aa21.89■■□□□ 1.1
PAX6-229ENST00000534353 MRC2Q9UBG0 1479 aa21.75■■□□□ 1.07
PAX6-229ENST00000534353 CFTRP13569 1480 aa21.72■■□□□ 1.07
PAX6-229ENST00000534353 TOP2AP11388 1531 aaKnown RBP21.72■■□□□ 1.07
PAX6-229ENST00000534353 FANCD2Q9BXW9 1451 aa21.69■■□□□ 1.06
PAX6-229ENST00000534353 WDR62O43379 1518 aa21.67■■□□□ 1.06
PAX6-229ENST00000534353 CEP164Q9UPV0 1460 aa21.65■■□□□ 1.06
PAX6-229ENST00000534353 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.04
PAX6-229ENST00000534353 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
PAX6-229ENST00000534353 PRDM2Q13029 1718 aa21.32■■□□□ 1
PAX6-229ENST00000534353 OSCARQ8IYS5 282 aa21.32■■□□□ 1
PAX6-229ENST00000534353 TRIM41Q8WV44 630 aa21.29■■□□□ 1
PAX6-229ENST00000534353 TOPBP1Q92547 1522 aa21.29■■□□□ 1
PAX6-229ENST00000534353 ZNF608Q9ULD9 1512 aaPredicted RBP21.28■■□□□ 1
PAX6-229ENST00000534353 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
PAX6-229ENST00000534353 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
PAX6-229ENST00000534353 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
PAX6-229ENST00000534353 AQRO60306 1485 aaKnown RBP eCLIP21.12■□□□□ 0.97
PAX6-229ENST00000534353 POLA1P09884 1462 aaPredicted RBP21.08■□□□□ 0.97
PAX6-229ENST00000534353 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
PAX6-229ENST00000534353 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
PAX6-229ENST00000534353 RAD54L2Q9Y4B4 1467 aa21.06■□□□□ 0.96
PAX6-229ENST00000534353 EIF4G3O43432 1585 aaKnown RBP21.04■□□□□ 0.96
PAX6-229ENST00000534353 SOGA1O94964 1423 aa21.02■□□□□ 0.96
PAX6-229ENST00000534353 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
PAX6-229ENST00000534353 CUX1P39880 1505 aa20.97■□□□□ 0.95
PAX6-229ENST00000534353 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
PAX6-229ENST00000534353 FBLN2P98095 1184 aa20.95■□□□□ 0.94
PAX6-229ENST00000534353 RIMBP3CA6NJZ7 1639 aa20.94■□□□□ 0.94
PAX6-229ENST00000534353 RIMBP3BA6NNM3 1639 aa20.94■□□□□ 0.94
PAX6-229ENST00000534353 RIMBP3Q9UFD9 1639 aa20.94■□□□□ 0.94
PAX6-229ENST00000534353 ARHGEF11O15085 1522 aa20.89■□□□□ 0.94
PAX6-229ENST00000534353 CHD1O14646 1710 aa20.87■□□□□ 0.93
PAX6-229ENST00000534353 CYB5RLQ6IPT4 315 aa20.84■□□□□ 0.93
PAX6-229ENST00000534353 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.93
PAX6-229ENST00000534353 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
PAX6-229ENST00000534353 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
PAX6-229ENST00000534353 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
PAX6-229ENST00000534353 MAGI1Q96QZ7 1491 aaPredicted RBP20.74■□□□□ 0.91
PAX6-229ENST00000534353 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
PAX6-229ENST00000534353 ARAP1Q96P48 1450 aa20.73■□□□□ 0.91
PAX6-229ENST00000534353 ABCA10Q8WWZ4 1543 aa20.71■□□□□ 0.91
PAX6-229ENST00000534353 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
PAX6-229ENST00000534353 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
PAX6-229ENST00000534353 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
PAX6-229ENST00000534353 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
PAX6-229ENST00000534353 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
PAX6-229ENST00000534353 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
PAX6-229ENST00000534353 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
PAX6-229ENST00000534353 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
PAX6-229ENST00000534353 TRHP20396 242 aaPredicted RBP20.54■□□□□ 0.88
PAX6-229ENST00000534353 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
PAX6-229ENST00000534353 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
PAX6-229ENST00000534353 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
PAX6-229ENST00000534353 NUP160Q12769 1436 aa20.46■□□□□ 0.87
PAX6-229ENST00000534353 CEP170Q5SW79 1584 aa20.44■□□□□ 0.86
PAX6-229ENST00000534353 ERCC6L2Q5T890 1561 aa20.44■□□□□ 0.86
PAX6-229ENST00000534353 ERICH3Q5RHP9 1530 aa20.42■□□□□ 0.86
PAX6-229ENST00000534353 JPH4Q96JJ6 628 aa20.33■□□□□ 0.85
PAX6-229ENST00000534353 IGF1RP08069 1367 aa20.32■□□□□ 0.84
PAX6-229ENST00000534353 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
PAX6-229ENST00000534353 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.84
PAX6-229ENST00000534353 KIF27Q86VH2 1401 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms