RNA–Protein interactions for RNA: ENST00000534347.5

TTC17-214, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 3

Gene TTC17, Length 889 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-214ENST00000534347 NISCHQ9Y2I1 1504 aa39.97■■■■□ 3.99
TTC17-214ENST00000534347 CCDC180Q9P1Z9 1646 aa35.68■■■■□ 3.3
TTC17-214ENST00000534347 ABCC9O60706 1549 aa35.21■■■■□ 3.23
TTC17-214ENST00000534347 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
TTC17-214ENST00000534347 NACADO15069 1562 aa33.56■■■□□ 2.96
TTC17-214ENST00000534347 DCAF8L2P0C7V8 631 aa33.39■■■□□ 2.94
TTC17-214ENST00000534347 MYO15BQ96JP2 1530 aa33.27■■■□□ 2.92
TTC17-214ENST00000534347 ZCCHC6Q5VYS8 1495 aaKnown RBP33.25■■■□□ 2.91
TTC17-214ENST00000534347 UNC13AQ9UPW8 1703 aa33.08■■■□□ 2.89
TTC17-214ENST00000534347 DCAF1Q9Y4B6 1507 aa33.02■■■□□ 2.88
TTC17-214ENST00000534347 PABPN1Q86U42 306 aaKnown RBP eCLIP32.82■■■□□ 2.84
TTC17-214ENST00000534347 BICRAQ9NZM4 1560 aa32.8■■■□□ 2.84
TTC17-214ENST00000534347 DNAJC5BQ9UF47 199 aa32.65■■■□□ 2.82
TTC17-214ENST00000534347 SCRIBQ14160 1630 aa32.56■■■□□ 2.8
TTC17-214ENST00000534347 SHROOM4Q9ULL8 1493 aa32.27■■■□□ 2.76
TTC17-214ENST00000534347 EIF4G1Q04637 1599 aaKnown RBP31.9■■■□□ 2.7
TTC17-214ENST00000534347 CC2D2AQ9P2K1 1620 aa31.86■■■□□ 2.69
TTC17-214ENST00000534347 CECR2Q9BXF3 1484 aa31.64■■■□□ 2.66
TTC17-214ENST00000534347 SMARCA4P51532 1647 aa31.11■■■□□ 2.57
TTC17-214ENST00000534347 NCAPD3P42695 1498 aa30.99■■■□□ 2.55
TTC17-214ENST00000534347 ATAD2BQ9ULI0 1458 aa30.99■■■□□ 2.55
TTC17-214ENST00000534347 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
TTC17-214ENST00000534347 SMARCA2P51531 1590 aa30.88■■■□□ 2.53
TTC17-214ENST00000534347 MROH2BQ7Z745 1585 aa30.84■■■□□ 2.53
TTC17-214ENST00000534347 HMGXB3Q12766 1538 aa30.83■■■□□ 2.53
TTC17-214ENST00000534347 PEG3Q9GZU2 1588 aa30.8■■■□□ 2.52
TTC17-214ENST00000534347 BAZ1BQ9UIG0 1483 aaKnown RBP30.68■■■□□ 2.5
TTC17-214ENST00000534347 WIZO95785 1651 aa30.51■■■□□ 2.47
TTC17-214ENST00000534347 NESP48681 1621 aa30.43■■■□□ 2.46
TTC17-214ENST00000534347 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
TTC17-214ENST00000534347 ERCC6Q03468 1493 aa30.28■■■□□ 2.44
TTC17-214ENST00000534347 LAMC3Q9Y6N6 1575 aa30.22■■■□□ 2.43
TTC17-214ENST00000534347 TOP2AP11388 1531 aaKnown RBP30.12■■■□□ 2.41
TTC17-214ENST00000534347 CUX2O14529 1486 aa30.1■■■□□ 2.41
TTC17-214ENST00000534347 KIF21AQ7Z4S6 1674 aa30.07■■■□□ 2.41
TTC17-214ENST00000534347 THOC2Q8NI27 1593 aaKnown RBP30.04■■■□□ 2.4
TTC17-214ENST00000534347 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
TTC17-214ENST00000534347 PDS5BQ9NTI5 1447 aa29.96■■■□□ 2.39
TTC17-214ENST00000534347 CFTRP13569 1480 aa29.84■■■□□ 2.37
TTC17-214ENST00000534347 CCDC88BA6NC98 1476 aa29.76■■■□□ 2.35
TTC17-214ENST00000534347 FANCD2Q9BXW9 1451 aa29.74■■■□□ 2.35
TTC17-214ENST00000534347 MRC2Q9UBG0 1479 aa29.74■■■□□ 2.35
TTC17-214ENST00000534347 CEP164Q9UPV0 1460 aa29.7■■■□□ 2.35
TTC17-214ENST00000534347 WDR62O43379 1518 aa29.7■■■□□ 2.34
TTC17-214ENST00000534347 PRDM2Q13029 1718 aa29.65■■■□□ 2.34
TTC17-214ENST00000534347 DNAJC5Q9H3Z4 198 aa29.53■■■□□ 2.32
TTC17-214ENST00000534347 URB2Q14146 1524 aaKnown RBP29.51■■■□□ 2.32
TTC17-214ENST00000534347 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
TTC17-214ENST00000534347 TOPBP1Q92547 1522 aa29.25■■■□□ 2.27
TTC17-214ENST00000534347 DNMBPQ6XZF7 1577 aa29.18■■■□□ 2.26
TTC17-214ENST00000534347 ABCC8Q09428 1581 aa29.11■■■□□ 2.25
TTC17-214ENST00000534347 IFT140Q96RY7 1462 aa29.08■■■□□ 2.25
TTC17-214ENST00000534347 ZNF608Q9ULD9 1512 aaPredicted RBP29.08■■■□□ 2.25
TTC17-214ENST00000534347 TARBP1Q13395 1621 aaKnown RBP29■■■□□ 2.23
TTC17-214ENST00000534347 POLA1P09884 1462 aaPredicted RBP28.98■■■□□ 2.23
TTC17-214ENST00000534347 CUX1P39880 1505 aa28.95■■■□□ 2.23
TTC17-214ENST00000534347 EIF4G3O43432 1585 aaKnown RBP28.94■■■□□ 2.22
TTC17-214ENST00000534347 RAD54L2Q9Y4B4 1467 aa28.87■■■□□ 2.21
TTC17-214ENST00000534347 FGD5Q6ZNL6 1462 aa28.86■■■□□ 2.21
TTC17-214ENST00000534347 AQRO60306 1485 aaKnown RBP eCLIP28.82■■■□□ 2.2
TTC17-214ENST00000534347 SOGA1O94964 1423 aa28.79■■■□□ 2.2
TTC17-214ENST00000534347 OSCARQ8IYS5 282 aa28.72■■■□□ 2.19
TTC17-214ENST00000534347 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
TTC17-214ENST00000534347 TDRD9Q8NDG6 1382 aaKnown RBP28.71■■■□□ 2.19
TTC17-214ENST00000534347 CHD1O14646 1710 aa28.66■■■□□ 2.18
TTC17-214ENST00000534347 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
TTC17-214ENST00000534347 BIVM-ERCC5R4GMW8 1640 aa28.61■■■□□ 2.17
TTC17-214ENST00000534347 TOP2BQ02880 1626 aa28.58■■■□□ 2.17
TTC17-214ENST00000534347 WRNQ14191 1432 aaPredicted RBP eCLIP28.57■■■□□ 2.16
TTC17-214ENST00000534347 ABCA10Q8WWZ4 1543 aa28.55■■■□□ 2.16
TTC17-214ENST00000534347 SNAPC4Q5SXM2 1469 aa28.55■■■□□ 2.16
TTC17-214ENST00000534347 ABCA5Q8WWZ7 1642 aa28.53■■■□□ 2.16
TTC17-214ENST00000534347 PBRM1Q86U86 1689 aa28.51■■■□□ 2.16
TTC17-214ENST00000534347 GRIN2BQ13224 1484 aa28.5■■■□□ 2.15
TTC17-214ENST00000534347 GAPVD1Q14C86 1478 aa28.47■■■□□ 2.15
TTC17-214ENST00000534347 MAGI1Q96QZ7 1491 aaPredicted RBP28.46■■■□□ 2.15
TTC17-214ENST00000534347 RIMBP3CA6NJZ7 1639 aa28.45■■■□□ 2.14
TTC17-214ENST00000534347 RIMBP3BA6NNM3 1639 aa28.45■■■□□ 2.14
TTC17-214ENST00000534347 RIMBP3Q9UFD9 1639 aa28.45■■■□□ 2.14
TTC17-214ENST00000534347 FBLN2P98095 1184 aa28.43■■■□□ 2.14
TTC17-214ENST00000534347 TRIM41Q8WV44 630 aa28.41■■■□□ 2.14
TTC17-214ENST00000534347 ARHGEF11O15085 1522 aa28.39■■■□□ 2.14
TTC17-214ENST00000534347 SYNJ2O15056 1496 aa28.36■■■□□ 2.13
TTC17-214ENST00000534347 CLASP1Q7Z460 1538 aa28.33■■■□□ 2.13
TTC17-214ENST00000534347 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
TTC17-214ENST00000534347 ADAMTS12P58397 1594 aa28.26■■■□□ 2.11
TTC17-214ENST00000534347 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
TTC17-214ENST00000534347 GRIN2AQ12879 1464 aa28.17■■■□□ 2.1
TTC17-214ENST00000534347 ARAP1Q96P48 1450 aa28.16■■■□□ 2.1
TTC17-214ENST00000534347 FHAD1B1AJZ9 1412 aa28.11■■■□□ 2.09
TTC17-214ENST00000534347 CEP170Q5SW79 1584 aa28.11■■■□□ 2.09
TTC17-214ENST00000534347 NUP160Q12769 1436 aa28.07■■■□□ 2.08
TTC17-214ENST00000534347 CYB5RLQ6IPT4 315 aa28.06■■■□□ 2.08
TTC17-214ENST00000534347 ERCC6L2Q5T890 1561 aa27.96■■■□□ 2.07
TTC17-214ENST00000534347 KIF27Q86VH2 1401 aa27.95■■■□□ 2.07
TTC17-214ENST00000534347 SHROOM2Q13796 1616 aa27.93■■■□□ 2.06
TTC17-214ENST00000534347 IGF1RP08069 1367 aa27.93■■■□□ 2.06
TTC17-214ENST00000534347 CUL7Q14999 1698 aa27.88■■■□□ 2.05
TTC17-214ENST00000534347 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
TTC17-214ENST00000534347 CARMIL1Q5VZK9 1371 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms