RNA–Protein interactions for RNA: ENST00000534343.1

RRP8-205, Transcript of ribosomal RNA processing 8, humanhuman

TSL 2 BASIC

Gene RRP8, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-205ENST00000534343 NISCHQ9Y2I1 1504 aa25.97■■□□□ 1.75
RRP8-205ENST00000534343 ABCC9O60706 1549 aa23.57■■□□□ 1.36
RRP8-205ENST00000534343 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
RRP8-205ENST00000534343 DNAJC5BQ9UF47 199 aa22.41■■□□□ 1.18
RRP8-205ENST00000534343 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
RRP8-205ENST00000534343 NACADO15069 1562 aa22.23■■□□□ 1.15
RRP8-205ENST00000534343 MYO15BQ96JP2 1530 aa21.95■■□□□ 1.1
RRP8-205ENST00000534343 UNC13AQ9UPW8 1703 aa21.86■■□□□ 1.09
RRP8-205ENST00000534343 PABPN1Q86U42 306 aaKnown RBP eCLIP21.86■■□□□ 1.09
RRP8-205ENST00000534343 BICRAQ9NZM4 1560 aa21.8■■□□□ 1.08
RRP8-205ENST00000534343 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
RRP8-205ENST00000534343 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.04
RRP8-205ENST00000534343 DCAF1Q9Y4B6 1507 aa21.54■■□□□ 1.04
RRP8-205ENST00000534343 ZCCHC6Q5VYS8 1495 aaKnown RBP21.49■■□□□ 1.03
RRP8-205ENST00000534343 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1.01
RRP8-205ENST00000534343 CECR2Q9BXF3 1484 aa21.31■■□□□ 1
RRP8-205ENST00000534343 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
RRP8-205ENST00000534343 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
RRP8-205ENST00000534343 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
RRP8-205ENST00000534343 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
RRP8-205ENST00000534343 CUX2O14529 1486 aa20.54■□□□□ 0.88
RRP8-205ENST00000534343 ATAD2BQ9ULI0 1458 aa20.41■□□□□ 0.86
RRP8-205ENST00000534343 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
RRP8-205ENST00000534343 ERCC6Q03468 1493 aa20.35■□□□□ 0.85
RRP8-205ENST00000534343 SMARCA2P51531 1590 aa20.33■□□□□ 0.84
RRP8-205ENST00000534343 SMARCA4P51532 1647 aa20.3■□□□□ 0.84
RRP8-205ENST00000534343 PEG3Q9GZU2 1588 aa20.21■□□□□ 0.83
RRP8-205ENST00000534343 NESP48681 1621 aa20.19■□□□□ 0.82
RRP8-205ENST00000534343 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
RRP8-205ENST00000534343 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
RRP8-205ENST00000534343 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
RRP8-205ENST00000534343 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
RRP8-205ENST00000534343 MROH2BQ7Z745 1585 aa19.97■□□□□ 0.79
RRP8-205ENST00000534343 PDS5BQ9NTI5 1447 aa19.95■□□□□ 0.78
RRP8-205ENST00000534343 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
RRP8-205ENST00000534343 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
RRP8-205ENST00000534343 WDR62O43379 1518 aa19.8■□□□□ 0.76
RRP8-205ENST00000534343 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
RRP8-205ENST00000534343 WIZO95785 1651 aa19.68■□□□□ 0.74
RRP8-205ENST00000534343 CEP164Q9UPV0 1460 aa19.64■□□□□ 0.73
RRP8-205ENST00000534343 CFTRP13569 1480 aa19.61■□□□□ 0.73
RRP8-205ENST00000534343 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
RRP8-205ENST00000534343 TRIM41Q8WV44 630 aa19.59■□□□□ 0.73
RRP8-205ENST00000534343 URB2Q14146 1524 aaKnown RBP19.48■□□□□ 0.71
RRP8-205ENST00000534343 RSF1Q96T23 1441 aaPredicted RBP19.48■□□□□ 0.71
RRP8-205ENST00000534343 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
RRP8-205ENST00000534343 OSCARQ8IYS5 282 aa19.47■□□□□ 0.71
RRP8-205ENST00000534343 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
RRP8-205ENST00000534343 IFT140Q96RY7 1462 aa19.29■□□□□ 0.68
RRP8-205ENST00000534343 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
RRP8-205ENST00000534343 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
RRP8-205ENST00000534343 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
RRP8-205ENST00000534343 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
RRP8-205ENST00000534343 CCDC88BA6NC98 1476 aa19.23■□□□□ 0.67
RRP8-205ENST00000534343 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
RRP8-205ENST00000534343 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
RRP8-205ENST00000534343 ABCC8Q09428 1581 aa19.19■□□□□ 0.66
RRP8-205ENST00000534343 EIF4G3O43432 1585 aaKnown RBP19.14■□□□□ 0.65
RRP8-205ENST00000534343 DNMBPQ6XZF7 1577 aa19.13■□□□□ 0.65
RRP8-205ENST00000534343 TARBP1Q13395 1621 aaKnown RBP19.1■□□□□ 0.65
RRP8-205ENST00000534343 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.642e-6■■■■□ 24.6
RRP8-205ENST00000534343 POLA1P09884 1462 aaPredicted RBP19.01■□□□□ 0.63
RRP8-205ENST00000534343 CHD1O14646 1710 aa19■□□□□ 0.63
RRP8-205ENST00000534343 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
RRP8-205ENST00000534343 CYB5RLQ6IPT4 315 aa18.97■□□□□ 0.63
RRP8-205ENST00000534343 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
RRP8-205ENST00000534343 RAD54L2Q9Y4B4 1467 aa18.89■□□□□ 0.61
RRP8-205ENST00000534343 SOGA1O94964 1423 aa18.88■□□□□ 0.61
RRP8-205ENST00000534343 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
RRP8-205ENST00000534343 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
RRP8-205ENST00000534343 FBLN2P98095 1184 aa18.83■□□□□ 0.6
RRP8-205ENST00000534343 SNAPC4Q5SXM2 1469 aa18.83■□□□□ 0.6
RRP8-205ENST00000534343 FGD5Q6ZNL6 1462 aa18.83■□□□□ 0.6
RRP8-205ENST00000534343 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
RRP8-205ENST00000534343 SYNJ1O43426 1573 aa18.78■□□□□ 0.6
RRP8-205ENST00000534343 TRHP20396 242 aaPredicted RBP18.78■□□□□ 0.6
RRP8-205ENST00000534343 CUX1P39880 1505 aa18.78■□□□□ 0.6
RRP8-205ENST00000534343 GRIN2BQ13224 1484 aa18.77■□□□□ 0.6
RRP8-205ENST00000534343 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
RRP8-205ENST00000534343 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
RRP8-205ENST00000534343 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
RRP8-205ENST00000534343 ABCA10Q8WWZ4 1543 aa18.65■□□□□ 0.58
RRP8-205ENST00000534343 ABCA5Q8WWZ7 1642 aa18.64■□□□□ 0.57
RRP8-205ENST00000534343 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
RRP8-205ENST00000534343 GRIN2AQ12879 1464 aa18.54■□□□□ 0.56
RRP8-205ENST00000534343 NUP160Q12769 1436 aa18.54■□□□□ 0.56
RRP8-205ENST00000534343 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
RRP8-205ENST00000534343 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
RRP8-205ENST00000534343 SHROOM2Q13796 1616 aa18.49■□□□□ 0.55
RRP8-205ENST00000534343 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
RRP8-205ENST00000534343 CEP170Q5SW79 1584 aa18.47■□□□□ 0.55
RRP8-205ENST00000534343 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
RRP8-205ENST00000534343 BIVM-ERCC5R4GMW8 1640 aa18.43■□□□□ 0.54
RRP8-205ENST00000534343 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
RRP8-205ENST00000534343 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
RRP8-205ENST00000534343 ERICH3Q5RHP9 1530 aa18.41■□□□□ 0.54
RRP8-205ENST00000534343 KIF13AQ9H1H9 1805 aa18.31■□□□□ 0.52
RRP8-205ENST00000534343 PRG4Q92954 1404 aaPredicted RBP18.29■□□□□ 0.52
RRP8-205ENST00000534343 JPH4Q96JJ6 628 aa18.26■□□□□ 0.51
RRP8-205ENST00000534343 RUSC2Q8N2Y8 1516 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms