RNA–Protein interactions for RNA: ENST00000534295.1

SCUBE2-213, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 4

Gene SCUBE2, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-213ENST00000534295 NISCHQ9Y2I1 1504 aa31.28■■■□□ 2.6
SCUBE2-213ENST00000534295 ABCC9O60706 1549 aa28.37■■■□□ 2.13
SCUBE2-213ENST00000534295 CCDC180Q9P1Z9 1646 aa28.12■■■□□ 2.09
SCUBE2-213ENST00000534295 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
SCUBE2-213ENST00000534295 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
SCUBE2-213ENST00000534295 NACADO15069 1562 aa26.71■■□□□ 1.87
SCUBE2-213ENST00000534295 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
SCUBE2-213ENST00000534295 PABPN1Q86U42 306 aaKnown RBP eCLIP26.4■■□□□ 1.82
SCUBE2-213ENST00000534295 MYO15BQ96JP2 1530 aa26.35■■□□□ 1.81
SCUBE2-213ENST00000534295 UNC13AQ9UPW8 1703 aa26.19■■□□□ 1.78
SCUBE2-213ENST00000534295 BICRAQ9NZM4 1560 aa26.17■■□□□ 1.78
SCUBE2-213ENST00000534295 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
SCUBE2-213ENST00000534295 SHROOM4Q9ULL8 1493 aa25.86■■□□□ 1.73
SCUBE2-213ENST00000534295 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
SCUBE2-213ENST00000534295 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
SCUBE2-213ENST00000534295 CC2D2AQ9P2K1 1620 aa25.62■■□□□ 1.69
SCUBE2-213ENST00000534295 SCRIBQ14160 1630 aa25.53■■□□□ 1.68
SCUBE2-213ENST00000534295 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
SCUBE2-213ENST00000534295 DNAJC5Q9H3Z4 198 aa25■■□□□ 1.59
SCUBE2-213ENST00000534295 NCAPD3P42695 1498 aa24.73■■□□□ 1.55
SCUBE2-213ENST00000534295 CUX2O14529 1486 aa24.64■■□□□ 1.54
SCUBE2-213ENST00000534295 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
SCUBE2-213ENST00000534295 ERCC6Q03468 1493 aa24.5■■□□□ 1.51
SCUBE2-213ENST00000534295 SMARCA2P51531 1590 aa24.45■■□□□ 1.5
SCUBE2-213ENST00000534295 HMGXB3Q12766 1538 aa24.45■■□□□ 1.5
SCUBE2-213ENST00000534295 SMARCA4P51532 1647 aa24.39■■□□□ 1.5
SCUBE2-213ENST00000534295 NESP48681 1621 aa24.31■■□□□ 1.48
SCUBE2-213ENST00000534295 BAZ1AQ9NRL2 1556 aaPredicted RBP24.27■■□□□ 1.48
SCUBE2-213ENST00000534295 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
SCUBE2-213ENST00000534295 BAZ1BQ9UIG0 1483 aaKnown RBP24.25■■□□□ 1.47
SCUBE2-213ENST00000534295 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
SCUBE2-213ENST00000534295 THOC2Q8NI27 1593 aaKnown RBP24.1■■□□□ 1.45
SCUBE2-213ENST00000534295 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
SCUBE2-213ENST00000534295 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
SCUBE2-213ENST00000534295 CADPSQ9ULU8 1353 aa23.94■■□□□ 1.42
SCUBE2-213ENST00000534295 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.42
SCUBE2-213ENST00000534295 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
SCUBE2-213ENST00000534295 WDR62O43379 1518 aa23.76■■□□□ 1.39
SCUBE2-213ENST00000534295 WIZO95785 1651 aa23.7■■□□□ 1.38
SCUBE2-213ENST00000534295 CEP164Q9UPV0 1460 aa23.63■■□□□ 1.37
SCUBE2-213ENST00000534295 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
SCUBE2-213ENST00000534295 CFTRP13569 1480 aa23.61■■□□□ 1.37
SCUBE2-213ENST00000534295 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
SCUBE2-213ENST00000534295 RSF1Q96T23 1441 aaPredicted RBP23.52■■□□□ 1.36
SCUBE2-213ENST00000534295 OSCARQ8IYS5 282 aa23.5■■□□□ 1.35
SCUBE2-213ENST00000534295 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
SCUBE2-213ENST00000534295 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
SCUBE2-213ENST00000534295 CCDC88BA6NC98 1476 aa23.21■■□□□ 1.31
SCUBE2-213ENST00000534295 IFT140Q96RY7 1462 aa23.21■■□□□ 1.31
SCUBE2-213ENST00000534295 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
SCUBE2-213ENST00000534295 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
SCUBE2-213ENST00000534295 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
SCUBE2-213ENST00000534295 ABCC8Q09428 1581 aa23.1■■□□□ 1.29
SCUBE2-213ENST00000534295 RIMBP3CA6NJZ7 1639 aa23.1■■□□□ 1.29
SCUBE2-213ENST00000534295 RIMBP3BA6NNM3 1639 aa23.1■■□□□ 1.29
SCUBE2-213ENST00000534295 RIMBP3Q9UFD9 1639 aa23.1■■□□□ 1.29
SCUBE2-213ENST00000534295 ARHGEF11O15085 1522 aa23.05■■□□□ 1.28
SCUBE2-213ENST00000534295 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
SCUBE2-213ENST00000534295 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
SCUBE2-213ENST00000534295 AQRO60306 1485 aaKnown RBP eCLIP22.94■■□□□ 1.26
SCUBE2-213ENST00000534295 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
SCUBE2-213ENST00000534295 CYB5RLQ6IPT4 315 aa22.91■■□□□ 1.26
SCUBE2-213ENST00000534295 POLA1P09884 1462 aaPredicted RBP22.88■■□□□ 1.25
SCUBE2-213ENST00000534295 ARAP1Q96P48 1450 aa22.82■■□□□ 1.24
SCUBE2-213ENST00000534295 CHD1O14646 1710 aa22.8■■□□□ 1.24
SCUBE2-213ENST00000534295 FBLN2P98095 1184 aa22.79■■□□□ 1.24
SCUBE2-213ENST00000534295 SOGA1O94964 1423 aa22.79■■□□□ 1.24
SCUBE2-213ENST00000534295 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
SCUBE2-213ENST00000534295 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
SCUBE2-213ENST00000534295 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
SCUBE2-213ENST00000534295 TRHP20396 242 aaPredicted RBP22.68■■□□□ 1.22
SCUBE2-213ENST00000534295 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
SCUBE2-213ENST00000534295 SNAPC4Q5SXM2 1469 aa22.66■■□□□ 1.22
SCUBE2-213ENST00000534295 CLASP1Q7Z460 1538 aa22.66■■□□□ 1.22
SCUBE2-213ENST00000534295 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
SCUBE2-213ENST00000534295 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.21
SCUBE2-213ENST00000534295 CUX1P39880 1505 aa22.62■■□□□ 1.21
SCUBE2-213ENST00000534295 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
SCUBE2-213ENST00000534295 SYNJ2O15056 1496 aa22.57■■□□□ 1.2
SCUBE2-213ENST00000534295 SYNJ1O43426 1573 aa22.57■■□□□ 1.2
SCUBE2-213ENST00000534295 GAPVD1Q14C86 1478 aa22.49■■□□□ 1.19
SCUBE2-213ENST00000534295 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
SCUBE2-213ENST00000534295 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.17
SCUBE2-213ENST00000534295 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
SCUBE2-213ENST00000534295 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
SCUBE2-213ENST00000534295 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
SCUBE2-213ENST00000534295 GRIN2AQ12879 1464 aa22.3■■□□□ 1.16
SCUBE2-213ENST00000534295 NUP160Q12769 1436 aa22.3■■□□□ 1.16
SCUBE2-213ENST00000534295 ERCC6L2Q5T890 1561 aa22.24■■□□□ 1.15
SCUBE2-213ENST00000534295 FHAD1B1AJZ9 1412 aa22.22■■□□□ 1.15
SCUBE2-213ENST00000534295 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
SCUBE2-213ENST00000534295 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
SCUBE2-213ENST00000534295 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
SCUBE2-213ENST00000534295 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
SCUBE2-213ENST00000534295 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
SCUBE2-213ENST00000534295 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
SCUBE2-213ENST00000534295 BIVM-ERCC5R4GMW8 1640 aa22.15■■□□□ 1.14
SCUBE2-213ENST00000534295 JPH4Q96JJ6 628 aa22.08■■□□□ 1.13
SCUBE2-213ENST00000534295 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
SCUBE2-213ENST00000534295 KIF13AQ9H1H9 1805 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms