RNA–Protein interactions for RNA: ENST00000534260.5

RAB2A-212, Transcript of RAB2A, member RAS oncogene family, humanhuman

TSL 4

Gene RAB2A, Length 410 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB2A-212ENST00000534260 NISCHQ9Y2I1 1504 aa15.59■□□□□ 0.09
RAB2A-212ENST00000534260 AEBP2Q6ZN18 517 aaPredicted RBP14.5□□□□□ -0.09
RAB2A-212ENST00000534260 ABCC9O60706 1549 aa14.25□□□□□ -0.13
RAB2A-212ENST00000534260 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
RAB2A-212ENST00000534260 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
RAB2A-212ENST00000534260 CHIC1Q5VXU3 224 aa13.61□□□□□ -0.23
RAB2A-212ENST00000534260 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
RAB2A-212ENST00000534260 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.25
RAB2A-212ENST00000534260 NACADO15069 1562 aa13.38□□□□□ -0.27
RAB2A-212ENST00000534260 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
RAB2A-212ENST00000534260 MYO15BQ96JP2 1530 aa13.19□□□□□ -0.3
RAB2A-212ENST00000534260 BICRAQ9NZM4 1560 aa12.98□□□□□ -0.33
RAB2A-212ENST00000534260 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
RAB2A-212ENST00000534260 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
RAB2A-212ENST00000534260 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
RAB2A-212ENST00000534260 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
RAB2A-212ENST00000534260 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
RAB2A-212ENST00000534260 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
RAB2A-212ENST00000534260 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
RAB2A-212ENST00000534260 EIF4G1Q04637 1599 aaKnown RBP12.74□□□□□ -0.37
RAB2A-212ENST00000534260 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
RAB2A-212ENST00000534260 CUX2O14529 1486 aa12.45□□□□□ -0.42
RAB2A-212ENST00000534260 NCAPD3P42695 1498 aa12.44□□□□□ -0.42
RAB2A-212ENST00000534260 SENP3Q9H4L4 574 aaPredicted RBP12.42□□□□□ -0.42
RAB2A-212ENST00000534260 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
RAB2A-212ENST00000534260 ATAD2BQ9ULI0 1458 aa12.31□□□□□ -0.44
RAB2A-212ENST00000534260 SMARCA2P51531 1590 aa12.24□□□□□ -0.45
RAB2A-212ENST00000534260 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
RAB2A-212ENST00000534260 HMGXB3Q12766 1538 aa12.19□□□□□ -0.46
RAB2A-212ENST00000534260 PDS5BQ9NTI5 1447 aa12.17□□□□□ -0.46
RAB2A-212ENST00000534260 BAZ1BQ9UIG0 1483 aaKnown RBP12.15□□□□□ -0.46
RAB2A-212ENST00000534260 NESP48681 1621 aa12.14□□□□□ -0.47
RAB2A-212ENST00000534260 BAZ1AQ9NRL2 1556 aaPredicted RBP12.12□□□□□ -0.47
RAB2A-212ENST00000534260 SMARCA4P51532 1647 aa12.09□□□□□ -0.47
RAB2A-212ENST00000534260 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
RAB2A-212ENST00000534260 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
RAB2A-212ENST00000534260 LAMC3Q9Y6N6 1575 aa12.08□□□□□ -0.48
RAB2A-212ENST00000534260 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
RAB2A-212ENST00000534260 OSCARQ8IYS5 282 aa12.04□□□□□ -0.48
RAB2A-212ENST00000534260 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
RAB2A-212ENST00000534260 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.5
RAB2A-212ENST00000534260 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
RAB2A-212ENST00000534260 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
RAB2A-212ENST00000534260 WDR62O43379 1518 aa11.86□□□□□ -0.51
RAB2A-212ENST00000534260 FANCD2Q9BXW9 1451 aa11.84□□□□□ -0.51
RAB2A-212ENST00000534260 CFTRP13569 1480 aa11.83□□□□□ -0.52
RAB2A-212ENST00000534260 KIF21AQ7Z4S6 1674 aa11.8□□□□□ -0.52
RAB2A-212ENST00000534260 RSF1Q96T23 1441 aaPredicted RBP11.74□□□□□ -0.53
RAB2A-212ENST00000534260 CYB5RLQ6IPT4 315 aa11.71□□□□□ -0.53
RAB2A-212ENST00000534260 WIZO95785 1651 aa11.7□□□□□ -0.54
RAB2A-212ENST00000534260 URB2Q14146 1524 aaKnown RBP11.69□□□□□ -0.54
RAB2A-212ENST00000534260 IFT140Q96RY7 1462 aa11.69□□□□□ -0.54
RAB2A-212ENST00000534260 ABCC8Q09428 1581 aa11.67□□□□□ -0.54
RAB2A-212ENST00000534260 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
RAB2A-212ENST00000534260 TOP2AP11388 1531 aaKnown RBP11.64□□□□□ -0.55
RAB2A-212ENST00000534260 FBLN2P98095 1184 aa11.62□□□□□ -0.55
RAB2A-212ENST00000534260 FOXD1Q16676 465 aa11.59□□□□□ -0.55
RAB2A-212ENST00000534260 CCDC88BA6NC98 1476 aa11.58□□□□□ -0.56
RAB2A-212ENST00000534260 ZNF608Q9ULD9 1512 aaPredicted RBP11.58□□□□□ -0.56
RAB2A-212ENST00000534260 ARHGEF11O15085 1522 aa11.57□□□□□ -0.56
RAB2A-212ENST00000534260 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
RAB2A-212ENST00000534260 CHMP7Q8WUX9 453 aaPredicted RBP11.55□□□□□ -0.56
RAB2A-212ENST00000534260 RIMBP3CA6NJZ7 1639 aa11.54□□□□□ -0.56
RAB2A-212ENST00000534260 RIMBP3BA6NNM3 1639 aa11.54□□□□□ -0.56
RAB2A-212ENST00000534260 RIMBP3Q9UFD9 1639 aa11.54□□□□□ -0.56
RAB2A-212ENST00000534260 AQRO60306 1485 aaKnown RBP eCLIP11.53□□□□□ -0.56
RAB2A-212ENST00000534260 SOGA1O94964 1423 aa11.5□□□□□ -0.57
RAB2A-212ENST00000534260 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
RAB2A-212ENST00000534260 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
RAB2A-212ENST00000534260 POLA1P09884 1462 aaPredicted RBP11.43□□□□□ -0.58
RAB2A-212ENST00000534260 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
RAB2A-212ENST00000534260 RAD54L2Q9Y4B4 1467 aa11.39□□□□□ -0.59
RAB2A-212ENST00000534260 EIF4G3O43432 1585 aaKnown RBP11.39□□□□□ -0.59
RAB2A-212ENST00000534260 TARBP1Q13395 1621 aaKnown RBP11.38□□□□□ -0.59
RAB2A-212ENST00000534260 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
RAB2A-212ENST00000534260 MAGI1Q96QZ7 1491 aaPredicted RBP11.37□□□□□ -0.59
RAB2A-212ENST00000534260 PRDM2Q13029 1718 aa11.34□□□□□ -0.59
RAB2A-212ENST00000534260 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
RAB2A-212ENST00000534260 SYNJ2O15056 1496 aa11.33□□□□□ -0.6
RAB2A-212ENST00000534260 SNAPC4Q5SXM2 1469 aa11.33□□□□□ -0.6
RAB2A-212ENST00000534260 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
RAB2A-212ENST00000534260 FGD5Q6ZNL6 1462 aa11.32□□□□□ -0.6
RAB2A-212ENST00000534260 GAPVD1Q14C86 1478 aa11.29□□□□□ -0.6
RAB2A-212ENST00000534260 CLASP1Q7Z460 1538 aa11.28□□□□□ -0.6
RAB2A-212ENST00000534260 NPM1P06748 294 aaKnown RBP eCLIP11.26□□□□□ -0.61
RAB2A-212ENST00000534260 CHD1O14646 1710 aa11.26□□□□□ -0.61
RAB2A-212ENST00000534260 JPH4Q96JJ6 628 aa11.23□□□□□ -0.61
RAB2A-212ENST00000534260 WRNQ14191 1432 aaPredicted RBP eCLIP11.23□□□□□ -0.61
RAB2A-212ENST00000534260 CUX1P39880 1505 aa11.22□□□□□ -0.61
RAB2A-212ENST00000534260 ABCA10Q8WWZ4 1543 aa11.22□□□□□ -0.61
RAB2A-212ENST00000534260 FHAD1B1AJZ9 1412 aa11.18□□□□□ -0.62
RAB2A-212ENST00000534260 FAM69CQ0P6D2 419 aa11.17□□□□□ -0.62
RAB2A-212ENST00000534260 GRIN2AQ12879 1464 aa11.17□□□□□ -0.62
RAB2A-212ENST00000534260 NUP160Q12769 1436 aa11.17□□□□□ -0.62
RAB2A-212ENST00000534260 SUPT5HO00267 1087 aaKnown RBP11.16□□□□□ -0.62
RAB2A-212ENST00000534260 PRG4Q92954 1404 aaPredicted RBP11.12□□□□□ -0.63
RAB2A-212ENST00000534260 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
RAB2A-212ENST00000534260 ERICH3Q5RHP9 1530 aa11.07□□□□□ -0.64
RAB2A-212ENST00000534260 ABCA5Q8WWZ7 1642 aa11.06□□□□□ -0.64
RAB2A-212ENST00000534260 ABCC10Q5T3U5 1492 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms