RNA–Protein interactions for RNA: ENST00000534209.1

SDR42E1-203, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

TSL 2

Gene SDR42E1, Length 871 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-203ENST00000534209 NISCHQ9Y2I1 1504 aa30.82■■■□□ 2.52
SDR42E1-203ENST00000534209 ABCC9O60706 1549 aa27.86■■■□□ 2.05
SDR42E1-203ENST00000534209 CCDC180Q9P1Z9 1646 aa27.64■■■□□ 2.02
SDR42E1-203ENST00000534209 RB1CC1Q8TDY2 1594 aa26.39■■□□□ 1.82
SDR42E1-203ENST00000534209 DNAJC5BQ9UF47 199 aa26.36■■□□□ 1.81
SDR42E1-203ENST00000534209 NACADO15069 1562 aa26.2■■□□□ 1.78
SDR42E1-203ENST00000534209 DCAF8L2P0C7V8 631 aa25.99■■□□□ 1.75
SDR42E1-203ENST00000534209 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
SDR42E1-203ENST00000534209 MYO15BQ96JP2 1530 aa25.81■■□□□ 1.72
SDR42E1-203ENST00000534209 UNC13AQ9UPW8 1703 aa25.79■■□□□ 1.72
SDR42E1-203ENST00000534209 BICRAQ9NZM4 1560 aa25.73■■□□□ 1.71
SDR42E1-203ENST00000534209 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
SDR42E1-203ENST00000534209 DCAF1Q9Y4B6 1507 aa25.43■■□□□ 1.66
SDR42E1-203ENST00000534209 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
SDR42E1-203ENST00000534209 SCRIBQ14160 1630 aa25.22■■□□□ 1.63
SDR42E1-203ENST00000534209 CC2D2AQ9P2K1 1620 aa25.14■■□□□ 1.61
SDR42E1-203ENST00000534209 CECR2Q9BXF3 1484 aa25.1■■□□□ 1.61
SDR42E1-203ENST00000534209 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
SDR42E1-203ENST00000534209 NCAPD3P42695 1498 aa24.24■■□□□ 1.47
SDR42E1-203ENST00000534209 DNAJC5Q9H3Z4 198 aa24.23■■□□□ 1.47
SDR42E1-203ENST00000534209 ATAD2BQ9ULI0 1458 aa24.15■■□□□ 1.46
SDR42E1-203ENST00000534209 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
SDR42E1-203ENST00000534209 CUX2O14529 1486 aa24.04■■□□□ 1.44
SDR42E1-203ENST00000534209 HMGXB3Q12766 1538 aa24.01■■□□□ 1.43
SDR42E1-203ENST00000534209 ERCC6Q03468 1493 aa24■■□□□ 1.43
SDR42E1-203ENST00000534209 SMARCA2P51531 1590 aa24■■□□□ 1.43
SDR42E1-203ENST00000534209 NESP48681 1621 aa23.92■■□□□ 1.42
SDR42E1-203ENST00000534209 BAZ1AQ9NRL2 1556 aaPredicted RBP23.88■■□□□ 1.41
SDR42E1-203ENST00000534209 BAZ1BQ9UIG0 1483 aaKnown RBP23.86■■□□□ 1.41
SDR42E1-203ENST00000534209 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.41
SDR42E1-203ENST00000534209 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
SDR42E1-203ENST00000534209 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
SDR42E1-203ENST00000534209 LAMC3Q9Y6N6 1575 aa23.65■■□□□ 1.38
SDR42E1-203ENST00000534209 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
SDR42E1-203ENST00000534209 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
SDR42E1-203ENST00000534209 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
SDR42E1-203ENST00000534209 WIZO95785 1651 aa23.43■■□□□ 1.34
SDR42E1-203ENST00000534209 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
SDR42E1-203ENST00000534209 WDR62O43379 1518 aa23.32■■□□□ 1.32
SDR42E1-203ENST00000534209 RSF1Q96T23 1441 aaPredicted RBP23.23■■□□□ 1.31
SDR42E1-203ENST00000534209 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
SDR42E1-203ENST00000534209 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
SDR42E1-203ENST00000534209 CFTRP13569 1480 aa23.2■■□□□ 1.3
SDR42E1-203ENST00000534209 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
SDR42E1-203ENST00000534209 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
SDR42E1-203ENST00000534209 URB2Q14146 1524 aaKnown RBP23.07■■□□□ 1.28
SDR42E1-203ENST00000534209 OSCARQ8IYS5 282 aa22.9■■□□□ 1.26
SDR42E1-203ENST00000534209 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.25
SDR42E1-203ENST00000534209 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
SDR42E1-203ENST00000534209 ZNF608Q9ULD9 1512 aaPredicted RBP22.81■■□□□ 1.24
SDR42E1-203ENST00000534209 IFT140Q96RY7 1462 aa22.77■■□□□ 1.24
SDR42E1-203ENST00000534209 TOPBP1Q92547 1522 aa22.76■■□□□ 1.23
SDR42E1-203ENST00000534209 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.22
SDR42E1-203ENST00000534209 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.22
SDR42E1-203ENST00000534209 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.22
SDR42E1-203ENST00000534209 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
SDR42E1-203ENST00000534209 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
SDR42E1-203ENST00000534209 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
SDR42E1-203ENST00000534209 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
SDR42E1-203ENST00000534209 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
SDR42E1-203ENST00000534209 AQRO60306 1485 aaKnown RBP eCLIP22.56■■□□□ 1.2
SDR42E1-203ENST00000534209 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
SDR42E1-203ENST00000534209 RAD54L2Q9Y4B4 1467 aa22.46■■□□□ 1.19
SDR42E1-203ENST00000534209 CHD1O14646 1710 aa22.44■■□□□ 1.18
SDR42E1-203ENST00000534209 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
SDR42E1-203ENST00000534209 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
SDR42E1-203ENST00000534209 SOGA1O94964 1423 aa22.39■■□□□ 1.17
SDR42E1-203ENST00000534209 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
SDR42E1-203ENST00000534209 FBLN2P98095 1184 aa22.36■■□□□ 1.17
SDR42E1-203ENST00000534209 FGD5Q6ZNL6 1462 aa22.35■■□□□ 1.17
SDR42E1-203ENST00000534209 CUX1P39880 1505 aa22.34■■□□□ 1.17
SDR42E1-203ENST00000534209 SNAPC4Q5SXM2 1469 aa22.32■■□□□ 1.16
SDR42E1-203ENST00000534209 WDR97A6NE52 1622 aa22.26■■□□□ 1.15
SDR42E1-203ENST00000534209 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
SDR42E1-203ENST00000534209 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
SDR42E1-203ENST00000534209 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
SDR42E1-203ENST00000534209 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
SDR42E1-203ENST00000534209 SYNJ2O15056 1496 aa22.16■■□□□ 1.14
SDR42E1-203ENST00000534209 SYNJ1O43426 1573 aa22.15■■□□□ 1.14
SDR42E1-203ENST00000534209 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
SDR42E1-203ENST00000534209 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
SDR42E1-203ENST00000534209 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
SDR42E1-203ENST00000534209 ABCA5Q8WWZ7 1642 aa22.06■■□□□ 1.12
SDR42E1-203ENST00000534209 PBRM1Q86U86 1689 aa22.06■■□□□ 1.12
SDR42E1-203ENST00000534209 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
SDR42E1-203ENST00000534209 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
SDR42E1-203ENST00000534209 GRIN2AQ12879 1464 aa21.94■■□□□ 1.1
SDR42E1-203ENST00000534209 ERCC6L2Q5T890 1561 aa21.93■■□□□ 1.1
SDR42E1-203ENST00000534209 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
SDR42E1-203ENST00000534209 NUP160Q12769 1436 aa21.9■■□□□ 1.1
SDR42E1-203ENST00000534209 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
SDR42E1-203ENST00000534209 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
SDR42E1-203ENST00000534209 CEP170Q5SW79 1584 aa21.88■■□□□ 1.09
SDR42E1-203ENST00000534209 FHAD1B1AJZ9 1412 aa21.83■■□□□ 1.09
SDR42E1-203ENST00000534209 SHROOM2Q13796 1616 aa21.79■■□□□ 1.08
SDR42E1-203ENST00000534209 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
SDR42E1-203ENST00000534209 PRG4Q92954 1404 aaPredicted RBP21.67■■□□□ 1.06
SDR42E1-203ENST00000534209 JPH4Q96JJ6 628 aa21.64■■□□□ 1.05
SDR42E1-203ENST00000534209 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
SDR42E1-203ENST00000534209 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms