RNA–Protein interactions for RNA: ENST00000534194.1

PC-213, Transcript of pyruvate carboxylase, humanhuman

TSL 3

Gene PC, Length 512 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-213ENST00000534194 NISCHQ9Y2I1 1504 aa35.88■■■■□ 3.33
PC-213ENST00000534194 ABCC9O60706 1549 aa32.7■■■□□ 2.83
PC-213ENST00000534194 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
PC-213ENST00000534194 DNAJC5BQ9UF47 199 aa31.02■■■□□ 2.56
PC-213ENST00000534194 RB1CC1Q8TDY2 1594 aa30.95■■■□□ 2.54
PC-213ENST00000534194 NACADO15069 1562 aa30.65■■■□□ 2.5
PC-213ENST00000534194 DCAF8L2P0C7V8 631 aa30.42■■■□□ 2.46
PC-213ENST00000534194 PABPN1Q86U42 306 aaKnown RBP eCLIP30.39■■■□□ 2.46
PC-213ENST00000534194 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
PC-213ENST00000534194 MYO15BQ96JP2 1530 aa30.11■■■□□ 2.41
PC-213ENST00000534194 BICRAQ9NZM4 1560 aa30.1■■■□□ 2.41
PC-213ENST00000534194 ZCCHC6Q5VYS8 1495 aaKnown RBP29.66■■■□□ 2.34
PC-213ENST00000534194 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
PC-213ENST00000534194 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
PC-213ENST00000534194 CC2D2AQ9P2K1 1620 aa29.52■■■□□ 2.32
PC-213ENST00000534194 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
PC-213ENST00000534194 SCRIBQ14160 1630 aa29.46■■■□□ 2.31
PC-213ENST00000534194 EIF4G1Q04637 1599 aaKnown RBP29.37■■■□□ 2.29
PC-213ENST00000534194 DNAJC5Q9H3Z4 198 aa28.7■■■□□ 2.18
PC-213ENST00000534194 CUX2O14529 1486 aa28.31■■■□□ 2.12
PC-213ENST00000534194 NCAPD3P42695 1498 aa28.31■■■□□ 2.12
PC-213ENST00000534194 ERCC6Q03468 1493 aa28.23■■■□□ 2.11
PC-213ENST00000534194 ATAD2BQ9ULI0 1458 aa28.18■■■□□ 2.1
PC-213ENST00000534194 HMGXB3Q12766 1538 aa28.07■■■□□ 2.08
PC-213ENST00000534194 SMARCA2P51531 1590 aa28.07■■■□□ 2.08
PC-213ENST00000534194 SMARCA4P51532 1647 aa28.07■■■□□ 2.08
PC-213ENST00000534194 NESP48681 1621 aa28.01■■■□□ 2.07
PC-213ENST00000534194 BAZ1BQ9UIG0 1483 aaKnown RBP27.88■■■□□ 2.05
PC-213ENST00000534194 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
PC-213ENST00000534194 PEG3Q9GZU2 1588 aa27.79■■■□□ 2.04
PC-213ENST00000534194 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
PC-213ENST00000534194 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
PC-213ENST00000534194 MROH2BQ7Z745 1585 aa27.66■■■□□ 2.02
PC-213ENST00000534194 KIF21AQ7Z4S6 1674 aa27.62■■■□□ 2.01
PC-213ENST00000534194 PDS5BQ9NTI5 1447 aa27.56■■■□□ 2
PC-213ENST00000534194 CADPSQ9ULU8 1353 aa27.43■■□□□ 1.98
PC-213ENST00000534194 MRC2Q9UBG0 1479 aa27.36■■□□□ 1.97
PC-213ENST00000534194 WDR62O43379 1518 aa27.31■■□□□ 1.96
PC-213ENST00000534194 WIZO95785 1651 aa27.31■■□□□ 1.96
PC-213ENST00000534194 TRIM41Q8WV44 630 aa27.29■■□□□ 1.96
PC-213ENST00000534194 CEP164Q9UPV0 1460 aa27.18■■□□□ 1.94
PC-213ENST00000534194 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
PC-213ENST00000534194 CFTRP13569 1480 aa27.06■■□□□ 1.92
PC-213ENST00000534194 OSCARQ8IYS5 282 aa26.95■■□□□ 1.9
PC-213ENST00000534194 RSF1Q96T23 1441 aaPredicted RBP26.95■■□□□ 1.9
PC-213ENST00000534194 URB2Q14146 1524 aaKnown RBP26.94■■□□□ 1.9
PC-213ENST00000534194 TOP2AP11388 1531 aaKnown RBP26.92■■□□□ 1.9
PC-213ENST00000534194 PRDM2Q13029 1718 aa26.76■■□□□ 1.87
PC-213ENST00000534194 ZNF608Q9ULD9 1512 aaPredicted RBP26.67■■□□□ 1.86
PC-213ENST00000534194 RIMBP3CA6NJZ7 1639 aa26.67■■□□□ 1.86
PC-213ENST00000534194 RIMBP3BA6NNM3 1639 aa26.67■■□□□ 1.86
PC-213ENST00000534194 RIMBP3Q9UFD9 1639 aa26.67■■□□□ 1.86
PC-213ENST00000534194 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
PC-213ENST00000534194 CCDC88BA6NC98 1476 aa26.63■■□□□ 1.85
PC-213ENST00000534194 TOPBP1Q92547 1522 aa26.58■■□□□ 1.85
PC-213ENST00000534194 ARHGEF11O15085 1522 aa26.55■■□□□ 1.84
PC-213ENST00000534194 EIF4G3O43432 1585 aaKnown RBP26.49■■□□□ 1.83
PC-213ENST00000534194 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
PC-213ENST00000534194 DNMBPQ6XZF7 1577 aa26.44■■□□□ 1.82
PC-213ENST00000534194 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.81
PC-213ENST00000534194 AQRO60306 1485 aaKnown RBP eCLIP26.38■■□□□ 1.81
PC-213ENST00000534194 CHD1O14646 1710 aa26.37■■□□□ 1.81
PC-213ENST00000534194 CYB5RLQ6IPT4 315 aa26.36■■□□□ 1.81
PC-213ENST00000534194 POLA1P09884 1462 aaPredicted RBP26.29■■□□□ 1.8
PC-213ENST00000534194 ARAP1Q96P48 1450 aa26.27■■□□□ 1.8
PC-213ENST00000534194 FBLN2P98095 1184 aa26.25■■□□□ 1.79
PC-213ENST00000534194 RAD54L2Q9Y4B4 1467 aa26.21■■□□□ 1.79
PC-213ENST00000534194 TRHP20396 242 aaPredicted RBP26.16■■□□□ 1.78
PC-213ENST00000534194 TDRD9Q8NDG6 1382 aaKnown RBP26.16■■□□□ 1.78
PC-213ENST00000534194 SOGA1O94964 1423 aa26.15■■□□□ 1.78
PC-213ENST00000534194 SNAPC4Q5SXM2 1469 aa26.09■■□□□ 1.77
PC-213ENST00000534194 FGD5Q6ZNL6 1462 aa26.07■■□□□ 1.76
PC-213ENST00000534194 CLASP1Q7Z460 1538 aa26.06■■□□□ 1.76
PC-213ENST00000534194 WDR97A6NE52 1622 aa26.05■■□□□ 1.76
PC-213ENST00000534194 CUX1P39880 1505 aa26■■□□□ 1.75
PC-213ENST00000534194 CHMP7Q8WUX9 453 aaPredicted RBP26■■□□□ 1.75
PC-213ENST00000534194 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
PC-213ENST00000534194 SYNJ1O43426 1573 aa25.98■■□□□ 1.75
PC-213ENST00000534194 GRIN2BQ13224 1484 aa25.96■■□□□ 1.75
PC-213ENST00000534194 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
PC-213ENST00000534194 PBRM1Q86U86 1689 aa25.85■■□□□ 1.73
PC-213ENST00000534194 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.73
PC-213ENST00000534194 ABCA5Q8WWZ7 1642 aa25.75■■□□□ 1.71
PC-213ENST00000534194 ABCA10Q8WWZ4 1543 aa25.75■■□□□ 1.71
PC-213ENST00000534194 ERCC6L2Q5T890 1561 aa25.65■■□□□ 1.7
PC-213ENST00000534194 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
PC-213ENST00000534194 GRIN2AQ12879 1464 aa25.63■■□□□ 1.69
PC-213ENST00000534194 ADAMTS12P58397 1594 aa25.58■■□□□ 1.69
PC-213ENST00000534194 CEP170Q5SW79 1584 aa25.57■■□□□ 1.68
PC-213ENST00000534194 NUP160Q12769 1436 aa25.56■■□□□ 1.68
PC-213ENST00000534194 WRNQ14191 1432 aaPredicted RBP eCLIP25.56■■□□□ 1.68
PC-213ENST00000534194 SHROOM2Q13796 1616 aa25.5■■□□□ 1.67
PC-213ENST00000534194 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
PC-213ENST00000534194 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
PC-213ENST00000534194 BIVM-ERCC5R4GMW8 1640 aa25.48■■□□□ 1.67
PC-213ENST00000534194 FHAD1B1AJZ9 1412 aa25.48■■□□□ 1.67
PC-213ENST00000534194 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
PC-213ENST00000534194 KIF13AQ9H1H9 1805 aa25.36■■□□□ 1.65
PC-213ENST00000534194 PRG4Q92954 1404 aaPredicted RBP25.34■■□□□ 1.65
PC-213ENST00000534194 JPH4Q96JJ6 628 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms