RNA–Protein interactions for RNA: ENST00000534171.5

ALKBH3-212, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 5

Gene ALKBH3, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-212ENST00000534171 NISCHQ9Y2I1 1504 aa37.35■■■■□ 3.57
ALKBH3-212ENST00000534171 CCDC180Q9P1Z9 1646 aa33.46■■■□□ 2.95
ALKBH3-212ENST00000534171 ABCC9O60706 1549 aa33.34■■■□□ 2.93
ALKBH3-212ENST00000534171 RB1CC1Q8TDY2 1594 aa31.81■■■□□ 2.68
ALKBH3-212ENST00000534171 NACADO15069 1562 aa31.64■■■□□ 2.65
ALKBH3-212ENST00000534171 DCAF8L2P0C7V8 631 aa31.43■■■□□ 2.62
ALKBH3-212ENST00000534171 MYO15BQ96JP2 1530 aa31.27■■■□□ 2.6
ALKBH3-212ENST00000534171 DNAJC5BQ9UF47 199 aa31.22■■■□□ 2.59
ALKBH3-212ENST00000534171 UNC13AQ9UPW8 1703 aa31.07■■■□□ 2.56
ALKBH3-212ENST00000534171 PABPN1Q86U42 306 aaKnown RBP eCLIP31.06■■■□□ 2.56
ALKBH3-212ENST00000534171 ZCCHC6Q5VYS8 1495 aaKnown RBP30.96■■■□□ 2.55
ALKBH3-212ENST00000534171 DCAF1Q9Y4B6 1507 aa30.89■■■□□ 2.54
ALKBH3-212ENST00000534171 BICRAQ9NZM4 1560 aa30.87■■■□□ 2.53
ALKBH3-212ENST00000534171 SHROOM4Q9ULL8 1493 aa30.52■■■□□ 2.48
ALKBH3-212ENST00000534171 SCRIBQ14160 1630 aa30.45■■■□□ 2.47
ALKBH3-212ENST00000534171 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.41
ALKBH3-212ENST00000534171 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
ALKBH3-212ENST00000534171 CECR2Q9BXF3 1484 aa30.05■■■□□ 2.4
ALKBH3-212ENST00000534171 NCAPD3P42695 1498 aa29.22■■■□□ 2.27
ALKBH3-212ENST00000534171 ATAD2BQ9ULI0 1458 aa29.12■■■□□ 2.25
ALKBH3-212ENST00000534171 DNAJC5Q9H3Z4 198 aa29.09■■■□□ 2.25
ALKBH3-212ENST00000534171 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
ALKBH3-212ENST00000534171 SMARCA2P51531 1590 aa29.05■■■□□ 2.24
ALKBH3-212ENST00000534171 HMGXB3Q12766 1538 aa28.99■■■□□ 2.23
ALKBH3-212ENST00000534171 BAZ1AQ9NRL2 1556 aaPredicted RBP28.98■■■□□ 2.23
ALKBH3-212ENST00000534171 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
ALKBH3-212ENST00000534171 BAZ1BQ9UIG0 1483 aaKnown RBP28.83■■■□□ 2.21
ALKBH3-212ENST00000534171 ERCC6Q03468 1493 aa28.79■■■□□ 2.2
ALKBH3-212ENST00000534171 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
ALKBH3-212ENST00000534171 CUX2O14529 1486 aa28.74■■■□□ 2.19
ALKBH3-212ENST00000534171 NESP48681 1621 aa28.66■■■□□ 2.18
ALKBH3-212ENST00000534171 LAMC3Q9Y6N6 1575 aa28.52■■■□□ 2.16
ALKBH3-212ENST00000534171 WIZO95785 1651 aa28.39■■■□□ 2.14
ALKBH3-212ENST00000534171 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
ALKBH3-212ENST00000534171 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
ALKBH3-212ENST00000534171 CADPSQ9ULU8 1353 aa28.32■■■□□ 2.12
ALKBH3-212ENST00000534171 KIF21AQ7Z4S6 1674 aa28.29■■■□□ 2.12
ALKBH3-212ENST00000534171 RSF1Q96T23 1441 aaPredicted RBP28.21■■■□□ 2.11
ALKBH3-212ENST00000534171 MRC2Q9UBG0 1479 aa28.09■■■□□ 2.09
ALKBH3-212ENST00000534171 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
ALKBH3-212ENST00000534171 WDR62O43379 1518 aa28.02■■■□□ 2.08
ALKBH3-212ENST00000534171 CFTRP13569 1480 aa28.02■■■□□ 2.08
ALKBH3-212ENST00000534171 CEP164Q9UPV0 1460 aa28■■■□□ 2.07
ALKBH3-212ENST00000534171 FANCD2Q9BXW9 1451 aa27.98■■■□□ 2.07
ALKBH3-212ENST00000534171 CCDC88BA6NC98 1476 aa27.76■■■□□ 2.03
ALKBH3-212ENST00000534171 URB2Q14146 1524 aaKnown RBP27.73■■■□□ 2.03
ALKBH3-212ENST00000534171 PRDM2Q13029 1718 aa27.72■■■□□ 2.03
ALKBH3-212ENST00000534171 TOPBP1Q92547 1522 aa27.46■■□□□ 1.99
ALKBH3-212ENST00000534171 IFT140Q96RY7 1462 aa27.45■■□□□ 1.99
ALKBH3-212ENST00000534171 OSCARQ8IYS5 282 aa27.45■■□□□ 1.98
ALKBH3-212ENST00000534171 TRIM41Q8WV44 630 aa27.45■■□□□ 1.98
ALKBH3-212ENST00000534171 ABCC8Q09428 1581 aa27.44■■□□□ 1.98
ALKBH3-212ENST00000534171 ZNF608Q9ULD9 1512 aaPredicted RBP27.36■■□□□ 1.97
ALKBH3-212ENST00000534171 DNMBPQ6XZF7 1577 aa27.36■■□□□ 1.97
ALKBH3-212ENST00000534171 TARBP1Q13395 1621 aaKnown RBP27.21■■□□□ 1.95
ALKBH3-212ENST00000534171 EIF4G3O43432 1585 aaKnown RBP27.21■■□□□ 1.95
ALKBH3-212ENST00000534171 POLA1P09884 1462 aaPredicted RBP27.19■■□□□ 1.94
ALKBH3-212ENST00000534171 AQRO60306 1485 aaKnown RBP eCLIP27.14■■□□□ 1.942e-6■■■■■ 36
ALKBH3-212ENST00000534171 SOGA1O94964 1423 aa27.07■■□□□ 1.92
ALKBH3-212ENST00000534171 RAD54L2Q9Y4B4 1467 aa27.06■■□□□ 1.92
ALKBH3-212ENST00000534171 RIMBP3CA6NJZ7 1639 aa27.04■■□□□ 1.92
ALKBH3-212ENST00000534171 RIMBP3BA6NNM3 1639 aa27.04■■□□□ 1.92
ALKBH3-212ENST00000534171 RIMBP3Q9UFD9 1639 aa27.04■■□□□ 1.92
ALKBH3-212ENST00000534171 CUX1P39880 1505 aa27.01■■□□□ 1.91
ALKBH3-212ENST00000534171 FGD5Q6ZNL6 1462 aa27.01■■□□□ 1.91
ALKBH3-212ENST00000534171 TDRD9Q8NDG6 1382 aaKnown RBP26.99■■□□□ 1.91
ALKBH3-212ENST00000534171 SUPT5HO00267 1087 aaKnown RBP26.99■■□□□ 1.91
ALKBH3-212ENST00000534171 CHD1O14646 1710 aa26.99■■□□□ 1.91
ALKBH3-212ENST00000534171 ARHGEF11O15085 1522 aa26.98■■□□□ 1.91
ALKBH3-212ENST00000534171 WDR97A6NE52 1622 aa26.97■■□□□ 1.91
ALKBH3-212ENST00000534171 FBLN2P98095 1184 aa26.93■■□□□ 1.9
ALKBH3-212ENST00000534171 SNAPC4Q5SXM2 1469 aa26.86■■□□□ 1.89
ALKBH3-212ENST00000534171 GRIN2BQ13224 1484 aa26.83■■□□□ 1.89
ALKBH3-212ENST00000534171 MAGI1Q96QZ7 1491 aaPredicted RBP26.83■■□□□ 1.89
ALKBH3-212ENST00000534171 CYB5RLQ6IPT4 315 aa26.78■■□□□ 1.88
ALKBH3-212ENST00000534171 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
ALKBH3-212ENST00000534171 ABCA10Q8WWZ4 1543 aa26.75■■□□□ 1.87
ALKBH3-212ENST00000534171 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
ALKBH3-212ENST00000534171 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
ALKBH3-212ENST00000534171 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
ALKBH3-212ENST00000534171 CLASP1Q7Z460 1538 aa26.71■■□□□ 1.87
ALKBH3-212ENST00000534171 SYNJ1O43426 1573 aa26.71■■□□□ 1.87
ALKBH3-212ENST00000534171 PBRM1Q86U86 1689 aa26.69■■□□□ 1.86
ALKBH3-212ENST00000534171 ABCA5Q8WWZ7 1642 aa26.67■■□□□ 1.86
ALKBH3-212ENST00000534171 WRNQ14191 1432 aaPredicted RBP eCLIP26.66■■□□□ 1.86
ALKBH3-212ENST00000534171 TOP2BQ02880 1626 aa26.61■■□□□ 1.85
ALKBH3-212ENST00000534171 BIVM-ERCC5R4GMW8 1640 aa26.61■■□□□ 1.85
ALKBH3-212ENST00000534171 GRIN2AQ12879 1464 aa26.48■■□□□ 1.83
ALKBH3-212ENST00000534171 ADAMTS12P58397 1594 aa26.46■■□□□ 1.83
ALKBH3-212ENST00000534171 TRHP20396 242 aaPredicted RBP26.43■■□□□ 1.82
ALKBH3-212ENST00000534171 FHAD1B1AJZ9 1412 aa26.42■■□□□ 1.82
ALKBH3-212ENST00000534171 ERICH3Q5RHP9 1530 aa26.41■■□□□ 1.82
ALKBH3-212ENST00000534171 NUP160Q12769 1436 aa26.39■■□□□ 1.82
ALKBH3-212ENST00000534171 CEP170Q5SW79 1584 aa26.36■■□□□ 1.81
ALKBH3-212ENST00000534171 ERCC6L2Q5T890 1561 aa26.27■■□□□ 1.8
ALKBH3-212ENST00000534171 SHROOM2Q13796 1616 aa26.26■■□□□ 1.79
ALKBH3-212ENST00000534171 JPH4Q96JJ6 628 aa26.14■■□□□ 1.78
ALKBH3-212ENST00000534171 PRG4Q92954 1404 aaPredicted RBP26.13■■□□□ 1.77
ALKBH3-212ENST00000534171 IGF1RP08069 1367 aa26.11■■□□□ 1.77
ALKBH3-212ENST00000534171 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms