RNA–Protein interactions for RNA: ENST00000534124.5

VPS51-214, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,089 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-214ENST00000534124 NISCHQ9Y2I1 1504 aa53.36■■■■■ 6.13
VPS51-214ENST00000534124 CCDC180Q9P1Z9 1646 aa47.92■■■■■ 5.26
VPS51-214ENST00000534124 ABCC9O60706 1549 aa47.33■■■■■ 5.17
VPS51-214ENST00000534124 RB1CC1Q8TDY2 1594 aa45.35■■■■■ 4.85
VPS51-214ENST00000534124 NACADO15069 1562 aa45.12■■■■■ 4.81
VPS51-214ENST00000534124 MYO15BQ96JP2 1530 aa44.66■■■■■ 4.74
VPS51-214ENST00000534124 DCAF8L2P0C7V8 631 aa44.62■■■■■ 4.73
VPS51-214ENST00000534124 UNC13AQ9UPW8 1703 aa44.41■■■■■ 4.7
VPS51-214ENST00000534124 ZCCHC6Q5VYS8 1495 aaKnown RBP44.34■■■■■ 4.69
VPS51-214ENST00000534124 DCAF1Q9Y4B6 1507 aa44.19■■■■■ 4.67
VPS51-214ENST00000534124 PABPN1Q86U42 306 aaKnown RBP eCLIP43.99■■■■■ 4.63
VPS51-214ENST00000534124 BICRAQ9NZM4 1560 aa43.98■■■■■ 4.63
VPS51-214ENST00000534124 DNAJC5BQ9UF47 199 aa43.95■■■■■ 4.63
VPS51-214ENST00000534124 SHROOM4Q9ULL8 1493 aa43.56■■■■■ 4.56
VPS51-214ENST00000534124 SCRIBQ14160 1630 aa43.54■■■■■ 4.56
VPS51-214ENST00000534124 EIF4G1Q04637 1599 aaKnown RBP42.89■■■■■ 4.46
VPS51-214ENST00000534124 CC2D2AQ9P2K1 1620 aa42.88■■■■■ 4.45
VPS51-214ENST00000534124 CECR2Q9BXF3 1484 aa42.64■■■■■ 4.42
VPS51-214ENST00000534124 SMARCA4P51532 1647 aa41.62■■■■■ 4.25
VPS51-214ENST00000534124 NCAPD3P42695 1498 aa41.58■■■■■ 4.25
VPS51-214ENST00000534124 ATAD2BQ9ULI0 1458 aa41.48■■■■■ 4.23
VPS51-214ENST00000534124 SMARCA2P51531 1590 aa41.48■■■■■ 4.23
VPS51-214ENST00000534124 BAZ1AQ9NRL2 1556 aaPredicted RBP41.46■■■■■ 4.23
VPS51-214ENST00000534124 HMGXB3Q12766 1538 aa41.41■■■■■ 4.22
VPS51-214ENST00000534124 PEG3Q9GZU2 1588 aa41.25■■■■■ 4.19
VPS51-214ENST00000534124 BAZ1BQ9UIG0 1483 aaKnown RBP41.14■■■■■ 4.18
VPS51-214ENST00000534124 MROH2BQ7Z745 1585 aa41.08■■■■■ 4.17
VPS51-214ENST00000534124 ERCC6Q03468 1493 aa40.9■■■■■ 4.14
VPS51-214ENST00000534124 CUX2O14529 1486 aa40.77■■■■■ 4.12
VPS51-214ENST00000534124 NESP48681 1621 aa40.76■■■■■ 4.12
VPS51-214ENST00000534124 LAMC3Q9Y6N6 1575 aa40.68■■■■■ 4.1
VPS51-214ENST00000534124 WIZO95785 1651 aa40.65■■■■■ 4.1
VPS51-214ENST00000534124 THOC2Q8NI27 1593 aaKnown RBP40.44■■■■■ 4.06
VPS51-214ENST00000534124 KIF21AQ7Z4S6 1674 aa40.4■■■■■ 4.06
VPS51-214ENST00000534124 PDS5BQ9NTI5 1447 aa40.33■■■■■ 4.05
VPS51-214ENST00000534124 RSF1Q96T23 1441 aaPredicted RBP40.33■■■■■ 4.05
VPS51-214ENST00000534124 CADPSQ9ULU8 1353 aa40.28■■■■■ 4.04
VPS51-214ENST00000534124 TOP2AP11388 1531 aaKnown RBP40.21■■■■■ 4.03
VPS51-214ENST00000534124 DNAJC5Q9H3Z4 198 aa40.2■■■■■ 4.03
VPS51-214ENST00000534124 MRC2Q9UBG0 1479 aa40■■■■□ 3.99
VPS51-214ENST00000534124 CFTRP13569 1480 aa39.95■■■■□ 3.99
VPS51-214ENST00000534124 WDR62O43379 1518 aa39.95■■■■□ 3.99
VPS51-214ENST00000534124 CEP164Q9UPV0 1460 aa39.92■■■■□ 3.98
VPS51-214ENST00000534124 FANCD2Q9BXW9 1451 aa39.86■■■■□ 3.97
VPS51-214ENST00000534124 PRDM2Q13029 1718 aa39.81■■■■□ 3.96
VPS51-214ENST00000534124 CCDC88BA6NC98 1476 aa39.63■■■■□ 3.94
VPS51-214ENST00000534124 URB2Q14146 1524 aaKnown RBP39.52■■■■□ 3.92
VPS51-214ENST00000534124 TOPBP1Q92547 1522 aa39.16■■■■□ 3.86
VPS51-214ENST00000534124 ABCC8Q09428 1581 aa39.14■■■■□ 3.86
VPS51-214ENST00000534124 DNMBPQ6XZF7 1577 aa39.12■■■■□ 3.85
VPS51-214ENST00000534124 IFT140Q96RY7 1462 aa39.09■■■■□ 3.85
VPS51-214ENST00000534124 ZNF608Q9ULD9 1512 aaPredicted RBP38.94■■■■□ 3.82
VPS51-214ENST00000534124 EIF4G3O43432 1585 aaKnown RBP38.87■■■■□ 3.81
VPS51-214ENST00000534124 TARBP1Q13395 1621 aaKnown RBP38.85■■■■□ 3.81
VPS51-214ENST00000534124 OSCARQ8IYS5 282 aa38.8■■■■□ 3.8
VPS51-214ENST00000534124 POLA1P09884 1462 aaPredicted RBP38.79■■■■□ 3.8
VPS51-214ENST00000534124 SUPT5HO00267 1087 aaKnown RBP38.62■■■■□ 3.77
VPS51-214ENST00000534124 CUX1P39880 1505 aa38.61■■■■□ 3.77
VPS51-214ENST00000534124 AQRO60306 1485 aaKnown RBP eCLIP38.59■■■■□ 3.773e-7■■■■□ 21.2
VPS51-214ENST00000534124 FGD5Q6ZNL6 1462 aa38.59■■■■□ 3.77
VPS51-214ENST00000534124 WDR97A6NE52 1622 aa38.58■■■■□ 3.77
VPS51-214ENST00000534124 RAD54L2Q9Y4B4 1467 aa38.55■■■■□ 3.76
VPS51-214ENST00000534124 CHD1O14646 1710 aa38.54■■■■□ 3.76
VPS51-214ENST00000534124 SOGA1O94964 1423 aa38.54■■■■□ 3.76
VPS51-214ENST00000534124 TRIM41Q8WV44 630 aa38.5■■■■□ 3.75
VPS51-214ENST00000534124 RIMBP3CA6NJZ7 1639 aa38.41■■■■□ 3.74
VPS51-214ENST00000534124 RIMBP3BA6NNM3 1639 aa38.41■■■■□ 3.74
VPS51-214ENST00000534124 RIMBP3Q9UFD9 1639 aa38.41■■■■□ 3.74
VPS51-214ENST00000534124 TDRD9Q8NDG6 1382 aaKnown RBP38.38■■■■□ 3.73
VPS51-214ENST00000534124 ARHGEF11O15085 1522 aa38.31■■■■□ 3.72
VPS51-214ENST00000534124 SNAPC4Q5SXM2 1469 aa38.28■■■■□ 3.72
VPS51-214ENST00000534124 MAGI1Q96QZ7 1491 aaPredicted RBP38.26■■■■□ 3.72
VPS51-214ENST00000534124 PBRM1Q86U86 1689 aa38.24■■■■□ 3.71
VPS51-214ENST00000534124 GRIN2BQ13224 1484 aa38.24■■■■□ 3.71
VPS51-214ENST00000534124 ABCA10Q8WWZ4 1543 aa38.19■■■■□ 3.7
VPS51-214ENST00000534124 BIVM-ERCC5R4GMW8 1640 aa38.19■■■■□ 3.7
VPS51-214ENST00000534124 FBLN2P98095 1184 aa38.18■■■■□ 3.7
VPS51-214ENST00000534124 ABCA5Q8WWZ7 1642 aa38.18■■■■□ 3.7
VPS51-214ENST00000534124 TOP2BQ02880 1626 aa38.15■■■■□ 3.7
VPS51-214ENST00000534124 GAPVD1Q14C86 1478 aa38.14■■■■□ 3.7
VPS51-214ENST00000534124 SYNJ2O15056 1496 aa38.09■■■■□ 3.69
VPS51-214ENST00000534124 SYNJ1O43426 1573 aa38.08■■■■□ 3.69
VPS51-214ENST00000534124 WRNQ14191 1432 aaPredicted RBP eCLIP38.07■■■■□ 3.69
VPS51-214ENST00000534124 CLASP1Q7Z460 1538 aa38.07■■■■□ 3.68
VPS51-214ENST00000534124 CHMP7Q8WUX9 453 aaPredicted RBP38■■■■□ 3.67
VPS51-214ENST00000534124 ARAP1Q96P48 1450 aa37.93■■■■□ 3.66
VPS51-214ENST00000534124 ADAMTS12P58397 1594 aa37.86■■■■□ 3.65
VPS51-214ENST00000534124 CYB5RLQ6IPT4 315 aa37.81■■■■□ 3.64
VPS51-214ENST00000534124 GRIN2AQ12879 1464 aa37.77■■■■□ 3.64
VPS51-214ENST00000534124 ERICH3Q5RHP9 1530 aa37.76■■■■□ 3.63
VPS51-214ENST00000534124 FHAD1B1AJZ9 1412 aa37.67■■■■□ 3.62
VPS51-214ENST00000534124 CEP170Q5SW79 1584 aa37.63■■■■□ 3.61
VPS51-214ENST00000534124 NUP160Q12769 1436 aa37.62■■■■□ 3.61
VPS51-214ENST00000534124 SHROOM2Q13796 1616 aa37.5■■■■□ 3.59
VPS51-214ENST00000534124 ERCC6L2Q5T890 1561 aa37.41■■■■□ 3.58
VPS51-214ENST00000534124 CUL7Q14999 1698 aa37.34■■■■□ 3.57
VPS51-214ENST00000534124 RUSC2Q8N2Y8 1516 aa37.33■■■■□ 3.57
VPS51-214ENST00000534124 KIF27Q86VH2 1401 aa37.33■■■■□ 3.57
VPS51-214ENST00000534124 TRHP20396 242 aaPredicted RBP37.29■■■■□ 3.56
VPS51-214ENST00000534124 IGF1RP08069 1367 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms