RNA–Protein interactions for RNA: ENST00000534120.1

AP000640.2-201, humanhuman

TSL 3

Gene AP000640.2, Length 630 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000640.2-201ENST00000534120 NISCHQ9Y2I1 1504 aa20.5■□□□□ 0.87
AP000640.2-201ENST00000534120 CCDC180Q9P1Z9 1646 aa18.06■□□□□ 0.48
AP000640.2-201ENST00000534120 ABCC9O60706 1549 aa17.67■□□□□ 0.42
AP000640.2-201ENST00000534120 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
AP000640.2-201ENST00000534120 MYO15BQ96JP2 1530 aa17.04■□□□□ 0.32
AP000640.2-201ENST00000534120 NACADO15069 1562 aa17.02■□□□□ 0.32
AP000640.2-201ENST00000534120 DCAF1Q9Y4B6 1507 aa16.98■□□□□ 0.31
AP000640.2-201ENST00000534120 DCAF8L2P0C7V8 631 aa16.98■□□□□ 0.31
AP000640.2-201ENST00000534120 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
AP000640.2-201ENST00000534120 RB1CC1Q8TDY2 1594 aa16.97■□□□□ 0.31
AP000640.2-201ENST00000534120 BICRAQ9NZM4 1560 aa16.59■□□□□ 0.25
AP000640.2-201ENST00000534120 UNC13AQ9UPW8 1703 aa16.57■□□□□ 0.24
AP000640.2-201ENST00000534120 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
AP000640.2-201ENST00000534120 SCRIBQ14160 1630 aa16.47■□□□□ 0.23
AP000640.2-201ENST00000534120 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
AP000640.2-201ENST00000534120 EIF4G1Q04637 1599 aaKnown RBP16.07■□□□□ 0.16
AP000640.2-201ENST00000534120 CECR2Q9BXF3 1484 aa16■□□□□ 0.15
AP000640.2-201ENST00000534120 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
AP000640.2-201ENST00000534120 CC2D2AQ9P2K1 1620 aa15.97■□□□□ 0.15
AP000640.2-201ENST00000534120 SMARCA4P51532 1647 aa15.82■□□□□ 0.12
AP000640.2-201ENST00000534120 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
AP000640.2-201ENST00000534120 MROH2BQ7Z745 1585 aa15.8■□□□□ 0.12
AP000640.2-201ENST00000534120 BAZ1AQ9NRL2 1556 aaPredicted RBP15.8■□□□□ 0.12
AP000640.2-201ENST00000534120 ATAD2BQ9ULI0 1458 aa15.79■□□□□ 0.12
AP000640.2-201ENST00000534120 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
AP000640.2-201ENST00000534120 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
AP000640.2-201ENST00000534120 SMARCA2P51531 1590 aa15.68■□□□□ 0.1
AP000640.2-201ENST00000534120 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
AP000640.2-201ENST00000534120 BAZ1BQ9UIG0 1483 aaKnown RBP15.57■□□□□ 0.08
AP000640.2-201ENST00000534120 WIZO95785 1651 aa15.57■□□□□ 0.08
AP000640.2-201ENST00000534120 CUX2O14529 1486 aa15.43■□□□□ 0.06
AP000640.2-201ENST00000534120 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
AP000640.2-201ENST00000534120 NESP48681 1621 aa15.35■□□□□ 0.05
AP000640.2-201ENST00000534120 ERCC6Q03468 1493 aa15.33■□□□□ 0.04
AP000640.2-201ENST00000534120 CADPSQ9ULU8 1353 aa15.32■□□□□ 0.04
AP000640.2-201ENST00000534120 CCDC88BA6NC98 1476 aa15.3■□□□□ 0.04
AP000640.2-201ENST00000534120 CFTRP13569 1480 aa15.26■□□□□ 0.03
AP000640.2-201ENST00000534120 LAMC3Q9Y6N6 1575 aa15.25■□□□□ 0.03
AP000640.2-201ENST00000534120 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
AP000640.2-201ENST00000534120 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
AP000640.2-201ENST00000534120 TRIM41Q8WV44 630 aa15.11■□□□□ 0.01
AP000640.2-201ENST00000534120 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0.01
AP000640.2-201ENST00000534120 KIF21AQ7Z4S6 1674 aa15.05■□□□□ -0
AP000640.2-201ENST00000534120 THOC2Q8NI27 1593 aaKnown RBP15.04■□□□□ -0
AP000640.2-201ENST00000534120 MRC2Q9UBG0 1479 aa15□□□□□ -0.01
AP000640.2-201ENST00000534120 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
AP000640.2-201ENST00000534120 WDR62O43379 1518 aa14.97□□□□□ -0.01
AP000640.2-201ENST00000534120 URB2Q14146 1524 aaKnown RBP14.97□□□□□ -0.01
AP000640.2-201ENST00000534120 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
AP000640.2-201ENST00000534120 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
AP000640.2-201ENST00000534120 ABCC8Q09428 1581 aa14.83□□□□□ -0.04
AP000640.2-201ENST00000534120 CUX1P39880 1505 aa14.81□□□□□ -0.04
AP000640.2-201ENST00000534120 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
AP000640.2-201ENST00000534120 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
AP000640.2-201ENST00000534120 IFT140Q96RY7 1462 aa14.73□□□□□ -0.05
AP000640.2-201ENST00000534120 TARBP1Q13395 1621 aaKnown RBP14.71□□□□□ -0.05
AP000640.2-201ENST00000534120 WRNQ14191 1432 aaPredicted RBP eCLIP14.71□□□□□ -0.05
AP000640.2-201ENST00000534120 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.06
AP000640.2-201ENST00000534120 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
AP000640.2-201ENST00000534120 FGD5Q6ZNL6 1462 aa14.69□□□□□ -0.06
AP000640.2-201ENST00000534120 SOGA1O94964 1423 aa14.69□□□□□ -0.06
AP000640.2-201ENST00000534120 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
AP000640.2-201ENST00000534120 SYNJ1O43426 1573 aa14.66□□□□□ -0.06
AP000640.2-201ENST00000534120 TOP2BQ02880 1626 aa14.66□□□□□ -0.06
AP000640.2-201ENST00000534120 AQRO60306 1485 aaKnown RBP eCLIP14.63□□□□□ -0.07
AP000640.2-201ENST00000534120 BIVM-ERCC5R4GMW8 1640 aa14.63□□□□□ -0.07
AP000640.2-201ENST00000534120 TDRD9Q8NDG6 1382 aaKnown RBP14.62□□□□□ -0.07
AP000640.2-201ENST00000534120 ABCA10Q8WWZ4 1543 aa14.6□□□□□ -0.07
AP000640.2-201ENST00000534120 EIF4G3O43432 1585 aaKnown RBP14.55□□□□□ -0.08
AP000640.2-201ENST00000534120 WDR97A6NE52 1622 aa14.54□□□□□ -0.08
AP000640.2-201ENST00000534120 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
AP000640.2-201ENST00000534120 RIMBP3CA6NJZ7 1639 aa14.5□□□□□ -0.09
AP000640.2-201ENST00000534120 RIMBP3BA6NNM3 1639 aa14.5□□□□□ -0.09
AP000640.2-201ENST00000534120 RIMBP3Q9UFD9 1639 aa14.5□□□□□ -0.09
AP000640.2-201ENST00000534120 GRIN2BQ13224 1484 aa14.49□□□□□ -0.09
AP000640.2-201ENST00000534120 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
AP000640.2-201ENST00000534120 IGF1RP08069 1367 aa14.44□□□□□ -0.1
AP000640.2-201ENST00000534120 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
AP000640.2-201ENST00000534120 MAGI1Q96QZ7 1491 aaPredicted RBP14.43□□□□□ -0.1
AP000640.2-201ENST00000534120 ARHGEF11O15085 1522 aa14.41□□□□□ -0.1
AP000640.2-201ENST00000534120 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
AP000640.2-201ENST00000534120 CHIC1Q5VXU3 224 aa14.39□□□□□ -0.11
AP000640.2-201ENST00000534120 ERICH3Q5RHP9 1530 aa14.39□□□□□ -0.11
AP000640.2-201ENST00000534120 SYNJ2O15056 1496 aa14.38□□□□□ -0.11
AP000640.2-201ENST00000534120 RUSC2Q8N2Y8 1516 aa14.37□□□□□ -0.11
AP000640.2-201ENST00000534120 CYB5RLQ6IPT4 315 aa14.37□□□□□ -0.11
AP000640.2-201ENST00000534120 KIF27Q86VH2 1401 aa14.37□□□□□ -0.11
AP000640.2-201ENST00000534120 CHMP7Q8WUX9 453 aaPredicted RBP14.36□□□□□ -0.11
AP000640.2-201ENST00000534120 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
AP000640.2-201ENST00000534120 AEBP2Q6ZN18 517 aaPredicted RBP14.35□□□□□ -0.11
AP000640.2-201ENST00000534120 PBRM1Q86U86 1689 aa14.34□□□□□ -0.11
AP000640.2-201ENST00000534120 FBLN2P98095 1184 aa14.34□□□□□ -0.11
AP000640.2-201ENST00000534120 ADAMTS12P58397 1594 aa14.31□□□□□ -0.12
AP000640.2-201ENST00000534120 CHD1O14646 1710 aa14.3□□□□□ -0.12
AP000640.2-201ENST00000534120 NUP160Q12769 1436 aa14.3□□□□□ -0.12
AP000640.2-201ENST00000534120 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
AP000640.2-201ENST00000534120 CLASP1Q7Z460 1538 aa14.27□□□□□ -0.12
AP000640.2-201ENST00000534120 CARMIL1Q5VZK9 1371 aa14.27□□□□□ -0.12
AP000640.2-201ENST00000534120 CEP170Q5SW79 1584 aa14.22□□□□□ -0.13
AP000640.2-201ENST00000534120 ARAP1Q96P48 1450 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms