RNA–Protein interactions for RNA: ENST00000534055.1

AP001360.1-201, humanhuman

TSL 2 BASIC

Gene AP001360.1, Length 518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001360.1-201ENST00000534055 NISCHQ9Y2I1 1504 aa25.67■■□□□ 1.7
AP001360.1-201ENST00000534055 ABCC9O60706 1549 aa24.56■■□□□ 1.52
AP001360.1-201ENST00000534055 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
AP001360.1-201ENST00000534055 CCDC180Q9P1Z9 1646 aa23.49■■□□□ 1.35
AP001360.1-201ENST00000534055 RB1CC1Q8TDY2 1594 aa22.89■■□□□ 1.26
AP001360.1-201ENST00000534055 PABPN1Q86U42 306 aaKnown RBP eCLIP22.69■■□□□ 1.22
AP001360.1-201ENST00000534055 DNAJC5Q9H3Z4 198 aa22.67■■□□□ 1.22
AP001360.1-201ENST00000534055 NACADO15069 1562 aa22.45■■□□□ 1.18
AP001360.1-201ENST00000534055 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
AP001360.1-201ENST00000534055 DCAF8L2P0C7V8 631 aa22.25■■□□□ 1.15
AP001360.1-201ENST00000534055 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
AP001360.1-201ENST00000534055 BICRAQ9NZM4 1560 aa22.2■■□□□ 1.14
AP001360.1-201ENST00000534055 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
AP001360.1-201ENST00000534055 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
AP001360.1-201ENST00000534055 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
AP001360.1-201ENST00000534055 MYO15BQ96JP2 1530 aa21.74■■□□□ 1.07
AP001360.1-201ENST00000534055 CUX2O14529 1486 aa21.55■■□□□ 1.04
AP001360.1-201ENST00000534055 SCRIBQ14160 1630 aa21.41■■□□□ 1.02
AP001360.1-201ENST00000534055 TRIM41Q8WV44 630 aa21.39■■□□□ 1.01
AP001360.1-201ENST00000534055 ERCC6Q03468 1493 aa21.32■■□□□ 1
AP001360.1-201ENST00000534055 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
AP001360.1-201ENST00000534055 ZCCHC6Q5VYS8 1495 aaKnown RBP21.06■□□□□ 0.96
AP001360.1-201ENST00000534055 NESP48681 1621 aa20.77■□□□□ 0.92
AP001360.1-201ENST00000534055 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
AP001360.1-201ENST00000534055 NCAPD3P42695 1498 aa20.71■□□□□ 0.91
AP001360.1-201ENST00000534055 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
AP001360.1-201ENST00000534055 ATAD2BQ9ULI0 1458 aa20.53■□□□□ 0.88
AP001360.1-201ENST00000534055 HMGXB3Q12766 1538 aa20.49■□□□□ 0.87
AP001360.1-201ENST00000534055 KIF21AQ7Z4S6 1674 aa20.48■□□□□ 0.87
AP001360.1-201ENST00000534055 BAZ1AQ9NRL2 1556 aaPredicted RBP20.46■□□□□ 0.87
AP001360.1-201ENST00000534055 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
AP001360.1-201ENST00000534055 AEBP2Q6ZN18 517 aaPredicted RBP20.41■□□□□ 0.86
AP001360.1-201ENST00000534055 OSCARQ8IYS5 282 aa20.4■□□□□ 0.86
AP001360.1-201ENST00000534055 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
AP001360.1-201ENST00000534055 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.85
AP001360.1-201ENST00000534055 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
AP001360.1-201ENST00000534055 SMARCA4P51532 1647 aa20.27■□□□□ 0.83
AP001360.1-201ENST00000534055 RIMBP3CA6NJZ7 1639 aa20.26■□□□□ 0.83
AP001360.1-201ENST00000534055 RIMBP3BA6NNM3 1639 aa20.26■□□□□ 0.83
AP001360.1-201ENST00000534055 RIMBP3Q9UFD9 1639 aa20.26■□□□□ 0.83
AP001360.1-201ENST00000534055 WDR62O43379 1518 aa20.23■□□□□ 0.83
AP001360.1-201ENST00000534055 TRHP20396 242 aaPredicted RBP20.21■□□□□ 0.83
AP001360.1-201ENST00000534055 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
AP001360.1-201ENST00000534055 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
AP001360.1-201ENST00000534055 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
AP001360.1-201ENST00000534055 PEG3Q9GZU2 1588 aa20.02■□□□□ 0.8
AP001360.1-201ENST00000534055 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
AP001360.1-201ENST00000534055 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
AP001360.1-201ENST00000534055 ARAP1Q96P48 1450 aa19.81■□□□□ 0.76
AP001360.1-201ENST00000534055 MROH2BQ7Z745 1585 aa19.78■□□□□ 0.76
AP001360.1-201ENST00000534055 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
AP001360.1-201ENST00000534055 ZNF608Q9ULD9 1512 aaPredicted RBP19.68■□□□□ 0.74
AP001360.1-201ENST00000534055 ILDR1Q86SU0 546 aaPredicted RBP19.62■□□□□ 0.73
AP001360.1-201ENST00000534055 IFT140Q96RY7 1462 aa19.61■□□□□ 0.73
AP001360.1-201ENST00000534055 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
AP001360.1-201ENST00000534055 CFTRP13569 1480 aa19.6■□□□□ 0.73
AP001360.1-201ENST00000534055 CHD1O14646 1710 aa19.59■□□□□ 0.73
AP001360.1-201ENST00000534055 EIF4G3O43432 1585 aaKnown RBP19.55■□□□□ 0.72
AP001360.1-201ENST00000534055 FBLN2P98095 1184 aa19.55■□□□□ 0.72
AP001360.1-201ENST00000534055 WIZO95785 1651 aa19.51■□□□□ 0.71
AP001360.1-201ENST00000534055 AQRO60306 1485 aaKnown RBP eCLIP19.39■□□□□ 0.69
AP001360.1-201ENST00000534055 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
AP001360.1-201ENST00000534055 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
AP001360.1-201ENST00000534055 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
AP001360.1-201ENST00000534055 SYNJ1O43426 1573 aa19.26■□□□□ 0.67
AP001360.1-201ENST00000534055 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
AP001360.1-201ENST00000534055 TARBP1Q13395 1621 aaKnown RBP19.24■□□□□ 0.67
AP001360.1-201ENST00000534055 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
AP001360.1-201ENST00000534055 DNMBPQ6XZF7 1577 aa19.21■□□□□ 0.67
AP001360.1-201ENST00000534055 TOP2AP11388 1531 aaKnown RBP19.2■□□□□ 0.66
AP001360.1-201ENST00000534055 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
AP001360.1-201ENST00000534055 SNAPC4Q5SXM2 1469 aa19.18■□□□□ 0.66
AP001360.1-201ENST00000534055 TDRD9Q8NDG6 1382 aaKnown RBP19.11■□□□□ 0.65
AP001360.1-201ENST00000534055 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
AP001360.1-201ENST00000534055 KDM4FA0A1W2PPD8 638 aa19.1■□□□□ 0.65
AP001360.1-201ENST00000534055 RAD54L2Q9Y4B4 1467 aa19.07■□□□□ 0.64
AP001360.1-201ENST00000534055 MAGI1Q96QZ7 1491 aaPredicted RBP19.06■□□□□ 0.64
AP001360.1-201ENST00000534055 KIF13AQ9H1H9 1805 aa19.02■□□□□ 0.64
AP001360.1-201ENST00000534055 SYNJ2O15056 1496 aa19.02■□□□□ 0.63
AP001360.1-201ENST00000534055 SOGA1O94964 1423 aa19■□□□□ 0.63
AP001360.1-201ENST00000534055 WDR97A6NE52 1622 aa18.97■□□□□ 0.63
AP001360.1-201ENST00000534055 CCDC88BA6NC98 1476 aa18.97■□□□□ 0.63
AP001360.1-201ENST00000534055 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
AP001360.1-201ENST00000534055 ERCC6L2Q5T890 1561 aa18.95■□□□□ 0.62
AP001360.1-201ENST00000534055 KDM6BO15054 1643 aa18.89■□□□□ 0.62
AP001360.1-201ENST00000534055 FAM69CQ0P6D2 419 aa18.89■□□□□ 0.61
AP001360.1-201ENST00000534055 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
AP001360.1-201ENST00000534055 HECW2Q9P2P5 1572 aa18.84■□□□□ 0.61
AP001360.1-201ENST00000534055 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
AP001360.1-201ENST00000534055 CEP170Q5SW79 1584 aa18.83■□□□□ 0.6
AP001360.1-201ENST00000534055 ABCC10Q5T3U5 1492 aa18.81■□□□□ 0.6
AP001360.1-201ENST00000534055 FBXO41Q8TF61 875 aa18.79■□□□□ 0.6
AP001360.1-201ENST00000534055 ADGRL1O94910 1474 aa18.76■□□□□ 0.59
AP001360.1-201ENST00000534055 DIP2BQ9P265 1576 aa18.74■□□□□ 0.59
AP001360.1-201ENST00000534055 NPM1P06748 294 aaKnown RBP eCLIP18.73■□□□□ 0.59
AP001360.1-201ENST00000534055 GRIN2AQ12879 1464 aa18.72■□□□□ 0.59
AP001360.1-201ENST00000534055 SHROOM2Q13796 1616 aa18.69■□□□□ 0.58
AP001360.1-201ENST00000534055 TSPOAP1O95153 1857 aa18.69■□□□□ 0.58
AP001360.1-201ENST00000534055 MAPKBP1O60336 1514 aa18.68■□□□□ 0.58
AP001360.1-201ENST00000534055 LMTK3Q96Q04 1460 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms