RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 NISCHQ9Y2I1 1504 aa46.33■■■■■ 5.01
LRRK1-210ENST00000534045 CCDC180Q9P1Z9 1646 aa41.52■■■■■ 4.24
LRRK1-210ENST00000534045 ABCC9O60706 1549 aa41.03■■■■■ 4.16
LRRK1-210ENST00000534045 DCAF8L2P0C7V8 631 aa39.31■■■■□ 3.88
LRRK1-210ENST00000534045 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
LRRK1-210ENST00000534045 NACADO15069 1562 aa39.03■■■■□ 3.84
LRRK1-210ENST00000534045 MYO15BQ96JP2 1530 aa38.6■■■■□ 3.77
LRRK1-210ENST00000534045 ZCCHC6Q5VYS8 1495 aaKnown RBP38.51■■■■□ 3.76
LRRK1-210ENST00000534045 UNC13AQ9UPW8 1703 aa38.44■■■■□ 3.74
LRRK1-210ENST00000534045 PABPN1Q86U42 306 aaKnown RBP eCLIP38.38■■■■□ 3.73
LRRK1-210ENST00000534045 DCAF1Q9Y4B6 1507 aa38.3■■■■□ 3.72
LRRK1-210ENST00000534045 DNAJC5BQ9UF47 199 aa38.07■■■■□ 3.68
LRRK1-210ENST00000534045 BICRAQ9NZM4 1560 aa37.96■■■■□ 3.67
LRRK1-210ENST00000534045 SCRIBQ14160 1630 aa37.8■■■■□ 3.64
LRRK1-210ENST00000534045 SHROOM4Q9ULL8 1493 aa37.58■■■■□ 3.61
LRRK1-210ENST00000534045 EIF4G1Q04637 1599 aaKnown RBP37.03■■■■□ 3.52
LRRK1-210ENST00000534045 CC2D2AQ9P2K1 1620 aa36.99■■■■□ 3.51
LRRK1-210ENST00000534045 CECR2Q9BXF3 1484 aa36.9■■■■□ 3.5
LRRK1-210ENST00000534045 SMARCA4P51532 1647 aa36.11■■■■□ 3.37
LRRK1-210ENST00000534045 NCAPD3P42695 1498 aa36.05■■■■□ 3.36
LRRK1-210ENST00000534045 ATAD2BQ9ULI0 1458 aa35.99■■■■□ 3.35
LRRK1-210ENST00000534045 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
LRRK1-210ENST00000534045 SMARCA2P51531 1590 aa35.93■■■■□ 3.34
LRRK1-210ENST00000534045 HMGXB3Q12766 1538 aa35.82■■■■□ 3.32
LRRK1-210ENST00000534045 BAZ1BQ9UIG0 1483 aaKnown RBP35.71■■■■□ 3.31
LRRK1-210ENST00000534045 PEG3Q9GZU2 1588 aa35.7■■■■□ 3.31
LRRK1-210ENST00000534045 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
LRRK1-210ENST00000534045 ERCC6Q03468 1493 aa35.48■■■■□ 3.27
LRRK1-210ENST00000534045 WIZO95785 1651 aa35.36■■■■□ 3.25
LRRK1-210ENST00000534045 NESP48681 1621 aa35.3■■■■□ 3.24
LRRK1-210ENST00000534045 RSF1Q96T23 1441 aaPredicted RBP35.17■■■■□ 3.22
LRRK1-210ENST00000534045 LAMC3Q9Y6N6 1575 aa35.16■■■■□ 3.22
LRRK1-210ENST00000534045 CUX2O14529 1486 aa35.14■■■■□ 3.22
LRRK1-210ENST00000534045 PDS5BQ9NTI5 1447 aa35.05■■■■□ 3.2
LRRK1-210ENST00000534045 CADPSQ9ULU8 1353 aa35.04■■■■□ 3.2
LRRK1-210ENST00000534045 KIF21AQ7Z4S6 1674 aa34.96■■■■□ 3.19
LRRK1-210ENST00000534045 TOP2AP11388 1531 aaKnown RBP34.94■■■■□ 3.18
LRRK1-210ENST00000534045 THOC2Q8NI27 1593 aaKnown RBP34.87■■■■□ 3.17
LRRK1-210ENST00000534045 DNAJC5Q9H3Z4 198 aa34.72■■■■□ 3.15
LRRK1-210ENST00000534045 CFTRP13569 1480 aa34.65■■■■□ 3.14
LRRK1-210ENST00000534045 MRC2Q9UBG0 1479 aa34.62■■■■□ 3.13
LRRK1-210ENST00000534045 FANCD2Q9BXW9 1451 aa34.6■■■■□ 3.13
LRRK1-210ENST00000534045 CEP164Q9UPV0 1460 aa34.6■■■■□ 3.13
LRRK1-210ENST00000534045 PRDM2Q13029 1718 aa34.59■■■■□ 3.13
LRRK1-210ENST00000534045 CCDC88BA6NC98 1476 aa34.52■■■■□ 3.12
LRRK1-210ENST00000534045 WDR62O43379 1518 aa34.48■■■■□ 3.11
LRRK1-210ENST00000534045 SUPT5HO00267 1087 aaKnown RBP34.21■■■■□ 3.07
LRRK1-210ENST00000534045 URB2Q14146 1524 aaKnown RBP34.2■■■■□ 3.07
LRRK1-210ENST00000534045 ABCC8Q09428 1581 aa34.01■■■■□ 3.03
LRRK1-210ENST00000534045 TOPBP1Q92547 1522 aa33.95■■■■□ 3.03
LRRK1-210ENST00000534045 DNMBPQ6XZF7 1577 aa33.9■■■■□ 3.02
LRRK1-210ENST00000534045 IFT140Q96RY7 1462 aa33.9■■■■□ 3.02
LRRK1-210ENST00000534045 OSCARQ8IYS5 282 aa33.81■■■■□ 3
LRRK1-210ENST00000534045 ZNF608Q9ULD9 1512 aaPredicted RBP33.74■■■□□ 2.99
LRRK1-210ENST00000534045 EIF4G3O43432 1585 aaKnown RBP33.64■■■□□ 2.98
LRRK1-210ENST00000534045 POLA1P09884 1462 aaPredicted RBP33.63■■■□□ 2.97
LRRK1-210ENST00000534045 TARBP1Q13395 1621 aaKnown RBP33.62■■■□□ 2.97
LRRK1-210ENST00000534045 SOGA1O94964 1423 aa33.62■■■□□ 2.97
LRRK1-210ENST00000534045 AQRO60306 1485 aaKnown RBP eCLIP33.57■■■□□ 2.97
LRRK1-210ENST00000534045 RAD54L2Q9Y4B4 1467 aa33.54■■■□□ 2.96
LRRK1-210ENST00000534045 TRIM41Q8WV44 630 aa33.51■■■□□ 2.95
LRRK1-210ENST00000534045 CUX1P39880 1505 aa33.51■■■□□ 2.95
LRRK1-210ENST00000534045 FGD5Q6ZNL6 1462 aa33.5■■■□□ 2.95
LRRK1-210ENST00000534045 FBLN2P98095 1184 aa33.49■■■□□ 2.95
LRRK1-210ENST00000534045 TDRD9Q8NDG6 1382 aaKnown RBP33.48■■■□□ 2.95
LRRK1-210ENST00000534045 WDR97A6NE52 1622 aa33.39■■■□□ 2.94
LRRK1-210ENST00000534045 CHD1O14646 1710 aa33.36■■■□□ 2.93
LRRK1-210ENST00000534045 CHMP7Q8WUX9 453 aaPredicted RBP33.27■■■□□ 2.92
LRRK1-210ENST00000534045 WRNQ14191 1432 aaPredicted RBP eCLIP33.23■■■□□ 2.91
LRRK1-210ENST00000534045 BIVM-ERCC5R4GMW8 1640 aa33.22■■■□□ 2.91
LRRK1-210ENST00000534045 GRIN2BQ13224 1484 aa33.21■■■□□ 2.91
LRRK1-210ENST00000534045 PBRM1Q86U86 1689 aa33.2■■■□□ 2.91
LRRK1-210ENST00000534045 SNAPC4Q5SXM2 1469 aa33.19■■■□□ 2.9
LRRK1-210ENST00000534045 TOP2BQ02880 1626 aa33.17■■■□□ 2.9
LRRK1-210ENST00000534045 GAPVD1Q14C86 1478 aa33.17■■■□□ 2.9
LRRK1-210ENST00000534045 SYNJ1O43426 1573 aa33.13■■■□□ 2.89
LRRK1-210ENST00000534045 ABCA10Q8WWZ4 1543 aa33.13■■■□□ 2.89
LRRK1-210ENST00000534045 MAGI1Q96QZ7 1491 aaPredicted RBP33.13■■■□□ 2.89
LRRK1-210ENST00000534045 ABCA5Q8WWZ7 1642 aa33.1■■■□□ 2.89
LRRK1-210ENST00000534045 RIMBP3CA6NJZ7 1639 aa33.09■■■□□ 2.89
LRRK1-210ENST00000534045 RIMBP3BA6NNM3 1639 aa33.09■■■□□ 2.89
LRRK1-210ENST00000534045 RIMBP3Q9UFD9 1639 aa33.09■■■□□ 2.89
LRRK1-210ENST00000534045 ARHGEF11O15085 1522 aa33.04■■■□□ 2.88
LRRK1-210ENST00000534045 SYNJ2O15056 1496 aa33.02■■■□□ 2.88
LRRK1-210ENST00000534045 CYB5RLQ6IPT4 315 aa33.01■■■□□ 2.87
LRRK1-210ENST00000534045 CLASP1Q7Z460 1538 aa32.85■■■□□ 2.85
LRRK1-210ENST00000534045 ADAMTS12P58397 1594 aa32.82■■■□□ 2.84
LRRK1-210ENST00000534045 FHAD1B1AJZ9 1412 aa32.77■■■□□ 2.84
LRRK1-210ENST00000534045 ERICH3Q5RHP9 1530 aa32.75■■■□□ 2.83
LRRK1-210ENST00000534045 GRIN2AQ12879 1464 aa32.74■■■□□ 2.83
LRRK1-210ENST00000534045 ARAP1Q96P48 1450 aa32.73■■■□□ 2.83
LRRK1-210ENST00000534045 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
LRRK1-210ENST00000534045 NUP160Q12769 1436 aa32.59■■■□□ 2.81
LRRK1-210ENST00000534045 CEP170Q5SW79 1584 aa32.58■■■□□ 2.81
LRRK1-210ENST00000534045 TRHP20396 242 aaPredicted RBP32.58■■■□□ 2.81
LRRK1-210ENST00000534045 IGF1RP08069 1367 aa32.51■■■□□ 2.79
LRRK1-210ENST00000534045 CUL7Q14999 1698 aa32.47■■■□□ 2.79
LRRK1-210ENST00000534045 JPH4Q96JJ6 628 aa32.46■■■□□ 2.79
LRRK1-210ENST00000534045 SHROOM2Q13796 1616 aa32.43■■■□□ 2.78
LRRK1-210ENST00000534045 RUSC2Q8N2Y8 1516 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms