RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
SOX9-AS1-213ENST00000533996 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
SOX9-AS1-213ENST00000533996 NISCHQ9Y2I1 1504 aa23.87■■□□□ 1.41
SOX9-AS1-213ENST00000533996 ABCC9O60706 1549 aa22.03■■□□□ 1.12
SOX9-AS1-213ENST00000533996 CCDC180Q9P1Z9 1646 aa21.69■■□□□ 1.06
SOX9-AS1-213ENST00000533996 PHF23Q9BUL5 403 aaPredicted RBP21.23■□□□□ 0.99
SOX9-AS1-213ENST00000533996 DNAJC5BQ9UF47 199 aa21.1■□□□□ 0.97
SOX9-AS1-213ENST00000533996 RB1CC1Q8TDY2 1594 aa20.86■□□□□ 0.93
SOX9-AS1-213ENST00000533996 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
SOX9-AS1-213ENST00000533996 NACADO15069 1562 aa20.62■□□□□ 0.89
SOX9-AS1-213ENST00000533996 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
SOX9-AS1-213ENST00000533996 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
SOX9-AS1-213ENST00000533996 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
SOX9-AS1-213ENST00000533996 BICRAQ9NZM4 1560 aa20.23■□□□□ 0.83
SOX9-AS1-213ENST00000533996 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
SOX9-AS1-213ENST00000533996 SHROOM4Q9ULL8 1493 aa20■□□□□ 0.79
SOX9-AS1-213ENST00000533996 CECR2Q9BXF3 1484 aa19.94■□□□□ 0.78
SOX9-AS1-213ENST00000533996 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
SOX9-AS1-213ENST00000533996 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.77
SOX9-AS1-213ENST00000533996 DNAJC5Q9H3Z4 198 aa19.82■□□□□ 0.76
SOX9-AS1-213ENST00000533996 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
SOX9-AS1-213ENST00000533996 DCAF1Q9Y4B6 1507 aa19.76■□□□□ 0.75
SOX9-AS1-213ENST00000533996 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
SOX9-AS1-213ENST00000533996 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
SOX9-AS1-213ENST00000533996 CUX2O14529 1486 aa19.29■□□□□ 0.68
SOX9-AS1-213ENST00000533996 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
SOX9-AS1-213ENST00000533996 FOXD1Q16676 465 aa19.06■□□□□ 0.64
SOX9-AS1-213ENST00000533996 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
SOX9-AS1-213ENST00000533996 ATAD2BQ9ULI0 1458 aa18.85■□□□□ 0.61
SOX9-AS1-213ENST00000533996 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
SOX9-AS1-213ENST00000533996 SMARCA2P51531 1590 aa18.82■□□□□ 0.6
SOX9-AS1-213ENST00000533996 NESP48681 1621 aa18.78■□□□□ 0.6
SOX9-AS1-213ENST00000533996 THOC2Q8NI27 1593 aaKnown RBP18.74■□□□□ 0.59
SOX9-AS1-213ENST00000533996 SMARCA4P51532 1647 aa18.72■□□□□ 0.59
SOX9-AS1-213ENST00000533996 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
SOX9-AS1-213ENST00000533996 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
SOX9-AS1-213ENST00000533996 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
SOX9-AS1-213ENST00000533996 ADRA2BP18089 450 aa18.62■□□□□ 0.57
SOX9-AS1-213ENST00000533996 PPP6R1Q9UPN7 881 aa18.59■□□□□ 0.57
SOX9-AS1-213ENST00000533996 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
SOX9-AS1-213ENST00000533996 PDS5BQ9NTI5 1447 aa18.58■□□□□ 0.57
SOX9-AS1-213ENST00000533996 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
SOX9-AS1-213ENST00000533996 KIF21AQ7Z4S6 1674 aa18.57■□□□□ 0.56
SOX9-AS1-213ENST00000533996 MRC2Q9UBG0 1479 aa18.41■□□□□ 0.54
SOX9-AS1-213ENST00000533996 CADPSQ9ULU8 1353 aa18.41■□□□□ 0.54
SOX9-AS1-213ENST00000533996 WDR62O43379 1518 aa18.39■□□□□ 0.54
SOX9-AS1-213ENST00000533996 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
SOX9-AS1-213ENST00000533996 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
SOX9-AS1-213ENST00000533996 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
SOX9-AS1-213ENST00000533996 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
SOX9-AS1-213ENST00000533996 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
SOX9-AS1-213ENST00000533996 WIZO95785 1651 aa18.11■□□□□ 0.49
SOX9-AS1-213ENST00000533996 RIMBP3CA6NJZ7 1639 aa18.09■□□□□ 0.49
SOX9-AS1-213ENST00000533996 RIMBP3BA6NNM3 1639 aa18.09■□□□□ 0.49
SOX9-AS1-213ENST00000533996 RIMBP3Q9UFD9 1639 aa18.09■□□□□ 0.49
SOX9-AS1-213ENST00000533996 CFTRP13569 1480 aa18.09■□□□□ 0.49
SOX9-AS1-213ENST00000533996 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
SOX9-AS1-213ENST00000533996 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
SOX9-AS1-213ENST00000533996 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
SOX9-AS1-213ENST00000533996 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
SOX9-AS1-213ENST00000533996 CYB5RLQ6IPT4 315 aa17.87■□□□□ 0.45
SOX9-AS1-213ENST00000533996 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
SOX9-AS1-213ENST00000533996 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
SOX9-AS1-213ENST00000533996 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
SOX9-AS1-213ENST00000533996 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
SOX9-AS1-213ENST00000533996 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
SOX9-AS1-213ENST00000533996 EIF4G3O43432 1585 aaKnown RBP17.77■□□□□ 0.44
SOX9-AS1-213ENST00000533996 TOPBP1Q92547 1522 aa17.77■□□□□ 0.43
SOX9-AS1-213ENST00000533996 CHD1O14646 1710 aa17.75■□□□□ 0.43
SOX9-AS1-213ENST00000533996 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
SOX9-AS1-213ENST00000533996 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
SOX9-AS1-213ENST00000533996 TARBP1Q13395 1621 aaKnown RBP17.67■□□□□ 0.42
SOX9-AS1-213ENST00000533996 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
SOX9-AS1-213ENST00000533996 AQRO60306 1485 aaKnown RBP eCLIP17.65■□□□□ 0.42
SOX9-AS1-213ENST00000533996 FBLN2P98095 1184 aa17.63■□□□□ 0.41
SOX9-AS1-213ENST00000533996 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
SOX9-AS1-213ENST00000533996 CLASP1Q7Z460 1538 aa17.54■□□□□ 0.4
SOX9-AS1-213ENST00000533996 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
SOX9-AS1-213ENST00000533996 MSH5O43196 834 aa17.52■□□□□ 0.4
SOX9-AS1-213ENST00000533996 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
SOX9-AS1-213ENST00000533996 SOGA1O94964 1423 aa17.48■□□□□ 0.39
SOX9-AS1-213ENST00000533996 PPP4R3CPQ6ZMV5 832 aa17.48■□□□□ 0.39
SOX9-AS1-213ENST00000533996 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
SOX9-AS1-213ENST00000533996 SNAPC4Q5SXM2 1469 aa17.46■□□□□ 0.39
SOX9-AS1-213ENST00000533996 MAGI1Q96QZ7 1491 aaPredicted RBP17.46■□□□□ 0.39
SOX9-AS1-213ENST00000533996 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
SOX9-AS1-213ENST00000533996 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
SOX9-AS1-213ENST00000533996 KCNA4P22459 653 aa17.45■□□□□ 0.38
SOX9-AS1-213ENST00000533996 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
SOX9-AS1-213ENST00000533996 GRIN2BQ13224 1484 aa17.39■□□□□ 0.37
SOX9-AS1-213ENST00000533996 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
SOX9-AS1-213ENST00000533996 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
SOX9-AS1-213ENST00000533996 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
SOX9-AS1-213ENST00000533996 CUX1P39880 1505 aa17.26■□□□□ 0.35
SOX9-AS1-213ENST00000533996 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
SOX9-AS1-213ENST00000533996 ABCA5Q8WWZ7 1642 aa17.18■□□□□ 0.34
SOX9-AS1-213ENST00000533996 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
SOX9-AS1-213ENST00000533996 KIF13AQ9H1H9 1805 aa17.17■□□□□ 0.34
SOX9-AS1-213ENST00000533996 ERCC6L2Q5T890 1561 aa17.16■□□□□ 0.34
SOX9-AS1-213ENST00000533996 GRIN2AQ12879 1464 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms