RNA–Protein interactions for RNA: ENST00000533991.1

RDX-216, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-216ENST00000533991 NISCHQ9Y2I1 1504 aa37.88■■■■□ 3.65
RDX-216ENST00000533991 CCDC180Q9P1Z9 1646 aa33.55■■■□□ 2.96
RDX-216ENST00000533991 ABCC9O60706 1549 aa33.22■■■□□ 2.91
RDX-216ENST00000533991 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
RDX-216ENST00000533991 RB1CC1Q8TDY2 1594 aa31.7■■■□□ 2.67
RDX-216ENST00000533991 NACADO15069 1562 aa31.66■■■□□ 2.66
RDX-216ENST00000533991 ZCCHC6Q5VYS8 1495 aaKnown RBP31.48■■■□□ 2.63
RDX-216ENST00000533991 MYO15BQ96JP2 1530 aa31.43■■■□□ 2.62
RDX-216ENST00000533991 DCAF1Q9Y4B6 1507 aa31.25■■■□□ 2.59
RDX-216ENST00000533991 PABPN1Q86U42 306 aaKnown RBP eCLIP31.14■■■□□ 2.58
RDX-216ENST00000533991 UNC13AQ9UPW8 1703 aa31.07■■■□□ 2.56
RDX-216ENST00000533991 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
RDX-216ENST00000533991 DNAJC5BQ9UF47 199 aa30.94■■■□□ 2.54
RDX-216ENST00000533991 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
RDX-216ENST00000533991 SHROOM4Q9ULL8 1493 aa30.34■■■□□ 2.45
RDX-216ENST00000533991 EIF4G1Q04637 1599 aaKnown RBP30.05■■■□□ 2.4
RDX-216ENST00000533991 CC2D2AQ9P2K1 1620 aa29.99■■■□□ 2.39
RDX-216ENST00000533991 CECR2Q9BXF3 1484 aa29.82■■■□□ 2.36
RDX-216ENST00000533991 SMARCA4P51532 1647 aa29.37■■■□□ 2.29
RDX-216ENST00000533991 ATAD2BQ9ULI0 1458 aa29.35■■■□□ 2.29
RDX-216ENST00000533991 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
RDX-216ENST00000533991 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.27
RDX-216ENST00000533991 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.27
RDX-216ENST00000533991 SMARCA2P51531 1590 aa29.13■■■□□ 2.25
RDX-216ENST00000533991 PEG3Q9GZU2 1588 aa29.09■■■□□ 2.25
RDX-216ENST00000533991 HMGXB3Q12766 1538 aa29.04■■■□□ 2.24
RDX-216ENST00000533991 BAZ1BQ9UIG0 1483 aaKnown RBP28.97■■■□□ 2.23
RDX-216ENST00000533991 WIZO95785 1651 aa28.88■■■□□ 2.21
RDX-216ENST00000533991 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
RDX-216ENST00000533991 NESP48681 1621 aa28.76■■■□□ 2.2
RDX-216ENST00000533991 ERCC6Q03468 1493 aa28.49■■■□□ 2.15
RDX-216ENST00000533991 CADPSQ9ULU8 1353 aa28.48■■■□□ 2.15
RDX-216ENST00000533991 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
RDX-216ENST00000533991 LAMC3Q9Y6N6 1575 aa28.45■■■□□ 2.14
RDX-216ENST00000533991 PDS5BQ9NTI5 1447 aa28.3■■■□□ 2.12
RDX-216ENST00000533991 CCDC88BA6NC98 1476 aa28.27■■■□□ 2.12
RDX-216ENST00000533991 CUX2O14529 1486 aa28.27■■■□□ 2.12
RDX-216ENST00000533991 CFTRP13569 1480 aa28.27■■■□□ 2.12
RDX-216ENST00000533991 KIF21AQ7Z4S6 1674 aa28.26■■■□□ 2.11
RDX-216ENST00000533991 THOC2Q8NI27 1593 aaKnown RBP28.22■■■□□ 2.11
RDX-216ENST00000533991 FANCD2Q9BXW9 1451 aa28.1■■■□□ 2.09
RDX-216ENST00000533991 MRC2Q9UBG0 1479 aa28.04■■■□□ 2.08
RDX-216ENST00000533991 SUPT5HO00267 1087 aaKnown RBP28.02■■■□□ 2.08
RDX-216ENST00000533991 CEP164Q9UPV0 1460 aa28.01■■■□□ 2.07
RDX-216ENST00000533991 WDR62O43379 1518 aa27.96■■■□□ 2.07
RDX-216ENST00000533991 URB2Q14146 1524 aaKnown RBP27.91■■■□□ 2.06
RDX-216ENST00000533991 DNAJC5Q9H3Z4 198 aa27.82■■■□□ 2.04
RDX-216ENST00000533991 PRDM2Q13029 1718 aa27.81■■■□□ 2.04
RDX-216ENST00000533991 TOPBP1Q92547 1522 aa27.66■■■□□ 2.02
RDX-216ENST00000533991 DNMBPQ6XZF7 1577 aa27.52■■■□□ 2
RDX-216ENST00000533991 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
RDX-216ENST00000533991 ABCC8Q09428 1581 aa27.5■■□□□ 1.99
RDX-216ENST00000533991 IFT140Q96RY7 1462 aa27.45■■□□□ 1.99
RDX-216ENST00000533991 CUX1P39880 1505 aa27.43■■□□□ 1.98
RDX-216ENST00000533991 POLA1P09884 1462 aaPredicted RBP27.42■■□□□ 1.98
RDX-216ENST00000533991 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
RDX-216ENST00000533991 TARBP1Q13395 1621 aaKnown RBP27.37■■□□□ 1.97
RDX-216ENST00000533991 AQRO60306 1485 aaKnown RBP eCLIP27.32■■□□□ 1.96
RDX-216ENST00000533991 SOGA1O94964 1423 aa27.32■■□□□ 1.96
RDX-216ENST00000533991 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
RDX-216ENST00000533991 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
RDX-216ENST00000533991 EIF4G3O43432 1585 aaKnown RBP27.21■■□□□ 1.95
RDX-216ENST00000533991 OSCARQ8IYS5 282 aa27.18■■□□□ 1.94
RDX-216ENST00000533991 WRNQ14191 1432 aaPredicted RBP eCLIP27.12■■□□□ 1.93
RDX-216ENST00000533991 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
RDX-216ENST00000533991 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
RDX-216ENST00000533991 WDR97A6NE52 1622 aa27.02■■□□□ 1.92
RDX-216ENST00000533991 ABCA10Q8WWZ4 1543 aa27.02■■□□□ 1.92
RDX-216ENST00000533991 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.92
RDX-216ENST00000533991 SNAPC4Q5SXM2 1469 aa26.96■■□□□ 1.91
RDX-216ENST00000533991 GAPVD1Q14C86 1478 aa26.95■■□□□ 1.91
RDX-216ENST00000533991 FBLN2P98095 1184 aa26.95■■□□□ 1.9
RDX-216ENST00000533991 GRIN2BQ13224 1484 aa26.94■■□□□ 1.9
RDX-216ENST00000533991 CHD1O14646 1710 aa26.9■■□□□ 1.9
RDX-216ENST00000533991 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
RDX-216ENST00000533991 MAGI1Q96QZ7 1491 aaPredicted RBP26.85■■□□□ 1.89
RDX-216ENST00000533991 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
RDX-216ENST00000533991 PBRM1Q86U86 1689 aa26.79■■□□□ 1.88
RDX-216ENST00000533991 SYNJ2O15056 1496 aa26.78■■□□□ 1.88
RDX-216ENST00000533991 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
RDX-216ENST00000533991 RIMBP3CA6NJZ7 1639 aa26.72■■□□□ 1.87
RDX-216ENST00000533991 RIMBP3BA6NNM3 1639 aa26.72■■□□□ 1.87
RDX-216ENST00000533991 RIMBP3Q9UFD9 1639 aa26.72■■□□□ 1.87
RDX-216ENST00000533991 ARHGEF11O15085 1522 aa26.7■■□□□ 1.87
RDX-216ENST00000533991 CLASP1Q7Z460 1538 aa26.68■■□□□ 1.86
RDX-216ENST00000533991 ERICH3Q5RHP9 1530 aa26.64■■□□□ 1.85
RDX-216ENST00000533991 ADAMTS12P58397 1594 aa26.63■■□□□ 1.85
RDX-216ENST00000533991 IGF1RP08069 1367 aa26.63■■□□□ 1.85
RDX-216ENST00000533991 FHAD1B1AJZ9 1412 aa26.62■■□□□ 1.85
RDX-216ENST00000533991 GRIN2AQ12879 1464 aa26.61■■□□□ 1.85
RDX-216ENST00000533991 CYB5RLQ6IPT4 315 aa26.57■■□□□ 1.84
RDX-216ENST00000533991 NUP160Q12769 1436 aa26.55■■□□□ 1.84
RDX-216ENST00000533991 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
RDX-216ENST00000533991 CEP170Q5SW79 1584 aa26.52■■□□□ 1.84
RDX-216ENST00000533991 KIF27Q86VH2 1401 aa26.52■■□□□ 1.84
RDX-216ENST00000533991 RUSC2Q8N2Y8 1516 aa26.48■■□□□ 1.83
RDX-216ENST00000533991 ERCC6L2Q5T890 1561 aa26.42■■□□□ 1.82
RDX-216ENST00000533991 CARMIL1Q5VZK9 1371 aa26.37■■□□□ 1.81
RDX-216ENST00000533991 JPH4Q96JJ6 628 aa26.34■■□□□ 1.81
RDX-216ENST00000533991 SHROOM2Q13796 1616 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms