RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 NISCHQ9Y2I1 1504 aa36.28■■■■□ 3.4
SHARPIN-208ENST00000533948 ABCC9O60706 1549 aa33.13■■■□□ 2.89
SHARPIN-208ENST00000533948 CCDC180Q9P1Z9 1646 aa32.67■■■□□ 2.82
SHARPIN-208ENST00000533948 DNAJC5BQ9UF47 199 aa31.43■■■□□ 2.62
SHARPIN-208ENST00000533948 RB1CC1Q8TDY2 1594 aa31.29■■■□□ 2.6
SHARPIN-208ENST00000533948 NACADO15069 1562 aa30.97■■■□□ 2.55
SHARPIN-208ENST00000533948 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.52
SHARPIN-208ENST00000533948 PABPN1Q86U42 306 aaKnown RBP eCLIP30.8■■■□□ 2.52
SHARPIN-208ENST00000533948 UNC13AQ9UPW8 1703 aa30.65■■■□□ 2.5
SHARPIN-208ENST00000533948 BICRAQ9NZM4 1560 aa30.45■■■□□ 2.47
SHARPIN-208ENST00000533948 MYO15BQ96JP2 1530 aa30.38■■■□□ 2.45
SHARPIN-208ENST00000533948 ZCCHC6Q5VYS8 1495 aaKnown RBP30■■■□□ 2.39
SHARPIN-208ENST00000533948 DCAF1Q9Y4B6 1507 aa29.88■■■□□ 2.37
SHARPIN-208ENST00000533948 CC2D2AQ9P2K1 1620 aa29.88■■■□□ 2.37
SHARPIN-208ENST00000533948 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
SHARPIN-208ENST00000533948 CECR2Q9BXF3 1484 aa29.85■■■□□ 2.37
SHARPIN-208ENST00000533948 SCRIBQ14160 1630 aa29.85■■■□□ 2.37
SHARPIN-208ENST00000533948 EIF4G1Q04637 1599 aaKnown RBP29.72■■■□□ 2.35
SHARPIN-208ENST00000533948 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
SHARPIN-208ENST00000533948 CUX2O14529 1486 aa28.62■■■□□ 2.17
SHARPIN-208ENST00000533948 NCAPD3P42695 1498 aa28.61■■■□□ 2.17
SHARPIN-208ENST00000533948 ERCC6Q03468 1493 aa28.59■■■□□ 2.17
SHARPIN-208ENST00000533948 ATAD2BQ9ULI0 1458 aa28.51■■■□□ 2.15
SHARPIN-208ENST00000533948 SMARCA4P51532 1647 aa28.39■■■□□ 2.13
SHARPIN-208ENST00000533948 NESP48681 1621 aa28.38■■■□□ 2.13
SHARPIN-208ENST00000533948 HMGXB3Q12766 1538 aa28.37■■■□□ 2.13
SHARPIN-208ENST00000533948 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
SHARPIN-208ENST00000533948 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
SHARPIN-208ENST00000533948 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
SHARPIN-208ENST00000533948 THOC2Q8NI27 1593 aaKnown RBP28.12■■■□□ 2.09
SHARPIN-208ENST00000533948 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
SHARPIN-208ENST00000533948 LAMC3Q9Y6N6 1575 aa28.02■■■□□ 2.08
SHARPIN-208ENST00000533948 MROH2BQ7Z745 1585 aa28■■■□□ 2.07
SHARPIN-208ENST00000533948 KIF21AQ7Z4S6 1674 aa27.97■■■□□ 2.07
SHARPIN-208ENST00000533948 PDS5BQ9NTI5 1447 aa27.85■■■□□ 2.05
SHARPIN-208ENST00000533948 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
SHARPIN-208ENST00000533948 TRIM41Q8WV44 630 aa27.68■■■□□ 2.02
SHARPIN-208ENST00000533948 MRC2Q9UBG0 1479 aa27.68■■■□□ 2.02
SHARPIN-208ENST00000533948 WIZO95785 1651 aa27.65■■■□□ 2.02
SHARPIN-208ENST00000533948 WDR62O43379 1518 aa27.62■■■□□ 2.01
SHARPIN-208ENST00000533948 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
SHARPIN-208ENST00000533948 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
SHARPIN-208ENST00000533948 CFTRP13569 1480 aa27.35■■□□□ 1.97
SHARPIN-208ENST00000533948 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
SHARPIN-208ENST00000533948 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.95
SHARPIN-208ENST00000533948 OSCARQ8IYS5 282 aa27.24■■□□□ 1.95
SHARPIN-208ENST00000533948 TOP2AP11388 1531 aaKnown RBP27.23■■□□□ 1.95
SHARPIN-208ENST00000533948 PRDM2Q13029 1718 aa27.04■■□□□ 1.92
SHARPIN-208ENST00000533948 ZNF608Q9ULD9 1512 aaPredicted RBP27.02■■□□□ 1.92
SHARPIN-208ENST00000533948 RIMBP3CA6NJZ7 1639 aa27■■□□□ 1.91
SHARPIN-208ENST00000533948 RIMBP3BA6NNM3 1639 aa27■■□□□ 1.91
SHARPIN-208ENST00000533948 RIMBP3Q9UFD9 1639 aa27■■□□□ 1.91
SHARPIN-208ENST00000533948 CCDC88BA6NC98 1476 aa26.94■■□□□ 1.9
SHARPIN-208ENST00000533948 IFT140Q96RY7 1462 aa26.94■■□□□ 1.9
SHARPIN-208ENST00000533948 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
SHARPIN-208ENST00000533948 ARHGEF11O15085 1522 aa26.87■■□□□ 1.89
SHARPIN-208ENST00000533948 EIF4G3O43432 1585 aaKnown RBP26.82■■□□□ 1.88
SHARPIN-208ENST00000533948 DNMBPQ6XZF7 1577 aa26.75■■□□□ 1.87
SHARPIN-208ENST00000533948 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
SHARPIN-208ENST00000533948 AQRO60306 1485 aaKnown RBP eCLIP26.71■■□□□ 1.874e-9■■■■■ 46.5
SHARPIN-208ENST00000533948 CHD1O14646 1710 aa26.7■■□□□ 1.86
SHARPIN-208ENST00000533948 CYB5RLQ6IPT4 315 aa26.69■■□□□ 1.86
SHARPIN-208ENST00000533948 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
SHARPIN-208ENST00000533948 ARAP1Q96P48 1450 aa26.61■■□□□ 1.85
SHARPIN-208ENST00000533948 POLA1P09884 1462 aaPredicted RBP26.6■■□□□ 1.85
SHARPIN-208ENST00000533948 FBLN2P98095 1184 aa26.59■■□□□ 1.85
SHARPIN-208ENST00000533948 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
SHARPIN-208ENST00000533948 TRHP20396 242 aaPredicted RBP26.5■■□□□ 1.83
SHARPIN-208ENST00000533948 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
SHARPIN-208ENST00000533948 SOGA1O94964 1423 aa26.45■■□□□ 1.82
SHARPIN-208ENST00000533948 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
SHARPIN-208ENST00000533948 FGD5Q6ZNL6 1462 aa26.39■■□□□ 1.82
SHARPIN-208ENST00000533948 CLASP1Q7Z460 1538 aa26.37■■□□□ 1.81
SHARPIN-208ENST00000533948 CUX1P39880 1505 aa26.32■■□□□ 1.8
SHARPIN-208ENST00000533948 WDR97A6NE52 1622 aa26.29■■□□□ 1.8
SHARPIN-208ENST00000533948 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
SHARPIN-208ENST00000533948 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
SHARPIN-208ENST00000533948 SYNJ1O43426 1573 aa26.28■■□□□ 1.8
SHARPIN-208ENST00000533948 GRIN2BQ13224 1484 aa26.25■■□□□ 1.79
SHARPIN-208ENST00000533948 SYNJ2O15056 1496 aa26.21■■□□□ 1.79
SHARPIN-208ENST00000533948 PBRM1Q86U86 1689 aa26.15■■□□□ 1.78
SHARPIN-208ENST00000533948 GAPVD1Q14C86 1478 aa26.12■■□□□ 1.77
SHARPIN-208ENST00000533948 ABCA5Q8WWZ7 1642 aa26.05■■□□□ 1.76
SHARPIN-208ENST00000533948 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
SHARPIN-208ENST00000533948 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
SHARPIN-208ENST00000533948 AEBP2Q6ZN18 517 aaPredicted RBP25.96■■□□□ 1.75
SHARPIN-208ENST00000533948 GRIN2AQ12879 1464 aa25.93■■□□□ 1.74
SHARPIN-208ENST00000533948 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
SHARPIN-208ENST00000533948 ADAMTS12P58397 1594 aa25.89■■□□□ 1.73
SHARPIN-208ENST00000533948 NUP160Q12769 1436 aa25.86■■□□□ 1.73
SHARPIN-208ENST00000533948 WRNQ14191 1432 aaPredicted RBP eCLIP25.84■■□□□ 1.73
SHARPIN-208ENST00000533948 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
SHARPIN-208ENST00000533948 SHROOM2Q13796 1616 aa25.78■■□□□ 1.72
SHARPIN-208ENST00000533948 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
SHARPIN-208ENST00000533948 FHAD1B1AJZ9 1412 aa25.76■■□□□ 1.71
SHARPIN-208ENST00000533948 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
SHARPIN-208ENST00000533948 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
SHARPIN-208ENST00000533948 KIF13AQ9H1H9 1805 aa25.66■■□□□ 1.7
SHARPIN-208ENST00000533948 PRG4Q92954 1404 aaPredicted RBP25.65■■□□□ 1.7
SHARPIN-208ENST00000533948 JPH4Q96JJ6 628 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 541.6 ms