RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
CLP1-206ENST00000533905 ABCC9O60706 1549 aa23.56■■□□□ 1.36
CLP1-206ENST00000533905 CCDC180Q9P1Z9 1646 aa23.36■■□□□ 1.33
CLP1-206ENST00000533905 RB1CC1Q8TDY2 1594 aa22.24■■□□□ 1.15
CLP1-206ENST00000533905 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
CLP1-206ENST00000533905 NACADO15069 1562 aa22.06■■□□□ 1.12
CLP1-206ENST00000533905 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
CLP1-206ENST00000533905 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.1
CLP1-206ENST00000533905 UNC13AQ9UPW8 1703 aa21.9■■□□□ 1.1
CLP1-206ENST00000533905 BICRAQ9NZM4 1560 aa21.8■■□□□ 1.08
CLP1-206ENST00000533905 MYO15BQ96JP2 1530 aa21.72■■□□□ 1.07
CLP1-206ENST00000533905 ZCCHC6Q5VYS8 1495 aaKnown RBP21.69■■□□□ 1.06
CLP1-206ENST00000533905 DCAF1Q9Y4B6 1507 aa21.48■■□□□ 1.03
CLP1-206ENST00000533905 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
CLP1-206ENST00000533905 CC2D2AQ9P2K1 1620 aa21.23■□□□□ 0.99
CLP1-206ENST00000533905 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
CLP1-206ENST00000533905 EIF4G1Q04637 1599 aaKnown RBP21.18■□□□□ 0.98
CLP1-206ENST00000533905 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
CLP1-206ENST00000533905 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
CLP1-206ENST00000533905 NCAPD3P42695 1498 aa20.42■□□□□ 0.86
CLP1-206ENST00000533905 SMARCA4P51532 1647 aa20.4■□□□□ 0.86
CLP1-206ENST00000533905 NESP48681 1621 aa20.31■□□□□ 0.84
CLP1-206ENST00000533905 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
CLP1-206ENST00000533905 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
CLP1-206ENST00000533905 MROH2BQ7Z745 1585 aa20.23■□□□□ 0.83
CLP1-206ENST00000533905 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
CLP1-206ENST00000533905 ERCC6Q03468 1493 aa20.2■□□□□ 0.82
CLP1-206ENST00000533905 DNAJC5Q9H3Z4 198 aa20.2■□□□□ 0.82
CLP1-206ENST00000533905 BAZ1BQ9UIG0 1483 aaKnown RBP20.17■□□□□ 0.82
CLP1-206ENST00000533905 PEG3Q9GZU2 1588 aa20.16■□□□□ 0.82
CLP1-206ENST00000533905 CUX2O14529 1486 aa20.15■□□□□ 0.82
CLP1-206ENST00000533905 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
CLP1-206ENST00000533905 WIZO95785 1651 aa19.97■□□□□ 0.79
CLP1-206ENST00000533905 KIF21AQ7Z4S6 1674 aa19.96■□□□□ 0.79
CLP1-206ENST00000533905 LAMC3Q9Y6N6 1575 aa19.93■□□□□ 0.78
CLP1-206ENST00000533905 CADPSQ9ULU8 1353 aa19.8■□□□□ 0.76
CLP1-206ENST00000533905 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
CLP1-206ENST00000533905 RSF1Q96T23 1441 aaPredicted RBP19.75■□□□□ 0.75
CLP1-206ENST00000533905 MRC2Q9UBG0 1479 aa19.7■□□□□ 0.74
CLP1-206ENST00000533905 WDR62O43379 1518 aa19.69■□□□□ 0.74
CLP1-206ENST00000533905 TOP2AP11388 1531 aaKnown RBP19.64■□□□□ 0.73
CLP1-206ENST00000533905 FANCD2Q9BXW9 1451 aa19.62■□□□□ 0.73
CLP1-206ENST00000533905 CFTRP13569 1480 aa19.6■□□□□ 0.73
CLP1-206ENST00000533905 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
CLP1-206ENST00000533905 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
CLP1-206ENST00000533905 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
CLP1-206ENST00000533905 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
CLP1-206ENST00000533905 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
CLP1-206ENST00000533905 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
CLP1-206ENST00000533905 TOPBP1Q92547 1522 aa19.27■□□□□ 0.68
CLP1-206ENST00000533905 IFT140Q96RY7 1462 aa19.19■□□□□ 0.66
CLP1-206ENST00000533905 EIF4G3O43432 1585 aaKnown RBP19.17■□□□□ 0.66
CLP1-206ENST00000533905 OSCARQ8IYS5 282 aa19.16■□□□□ 0.66
CLP1-206ENST00000533905 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
CLP1-206ENST00000533905 TARBP1Q13395 1621 aaKnown RBP19.14■□□□□ 0.65
CLP1-206ENST00000533905 RIMBP3CA6NJZ7 1639 aa19.11■□□□□ 0.65
CLP1-206ENST00000533905 RIMBP3BA6NNM3 1639 aa19.11■□□□□ 0.65
CLP1-206ENST00000533905 RIMBP3Q9UFD9 1639 aa19.11■□□□□ 0.65
CLP1-206ENST00000533905 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLP1-206ENST00000533905 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
CLP1-206ENST00000533905 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
CLP1-206ENST00000533905 ARHGEF11O15085 1522 aa19.04■□□□□ 0.64
CLP1-206ENST00000533905 CHD1O14646 1710 aa19.01■□□□□ 0.63
CLP1-206ENST00000533905 ABCC8Q09428 1581 aa19■□□□□ 0.63
CLP1-206ENST00000533905 CUX1P39880 1505 aa19■□□□□ 0.63
CLP1-206ENST00000533905 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
CLP1-206ENST00000533905 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
CLP1-206ENST00000533905 SOGA1O94964 1423 aa18.91■□□□□ 0.62
CLP1-206ENST00000533905 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
CLP1-206ENST00000533905 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
CLP1-206ENST00000533905 FBLN2P98095 1184 aa18.86■□□□□ 0.61
CLP1-206ENST00000533905 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
CLP1-206ENST00000533905 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
CLP1-206ENST00000533905 CYB5RLQ6IPT4 315 aa18.82■□□□□ 0.6
CLP1-206ENST00000533905 CLASP1Q7Z460 1538 aa18.82■□□□□ 0.6
CLP1-206ENST00000533905 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
CLP1-206ENST00000533905 PBRM1Q86U86 1689 aa18.73■□□□□ 0.59
CLP1-206ENST00000533905 ABCA5Q8WWZ7 1642 aa18.73■□□□□ 0.59
CLP1-206ENST00000533905 MAGI1Q96QZ7 1491 aaPredicted RBP18.72■□□□□ 0.59
CLP1-206ENST00000533905 SYNJ2O15056 1496 aa18.7■□□□□ 0.58
CLP1-206ENST00000533905 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
CLP1-206ENST00000533905 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
CLP1-206ENST00000533905 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
CLP1-206ENST00000533905 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
CLP1-206ENST00000533905 ERCC6L2Q5T890 1561 aa18.66■□□□□ 0.58
CLP1-206ENST00000533905 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
CLP1-206ENST00000533905 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
CLP1-206ENST00000533905 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
CLP1-206ENST00000533905 CEP170Q5SW79 1584 aa18.58■□□□□ 0.56
CLP1-206ENST00000533905 TRHP20396 242 aaPredicted RBP18.56■□□□□ 0.56
CLP1-206ENST00000533905 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
CLP1-206ENST00000533905 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
CLP1-206ENST00000533905 NUP160Q12769 1436 aa18.5■□□□□ 0.55
CLP1-206ENST00000533905 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
CLP1-206ENST00000533905 SHROOM2Q13796 1616 aa18.43■□□□□ 0.54
CLP1-206ENST00000533905 ERICH3Q5RHP9 1530 aa18.41■□□□□ 0.54
CLP1-206ENST00000533905 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
CLP1-206ENST00000533905 PRG4Q92954 1404 aaPredicted RBP18.31■□□□□ 0.52
CLP1-206ENST00000533905 IGF1RP08069 1367 aa18.24■□□□□ 0.51
CLP1-206ENST00000533905 JPH4Q96JJ6 628 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms