RNA–Protein interactions for RNA: ENST00000533900.1

DKK3-214, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 3

Gene DKK3, Length 717 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-214ENST00000533900 NISCHQ9Y2I1 1504 aa47.72■■■■■ 5.23
DKK3-214ENST00000533900 CCDC180Q9P1Z9 1646 aa42.5■■■■■ 4.39
DKK3-214ENST00000533900 ABCC9O60706 1549 aa42.14■■■■■ 4.34
DKK3-214ENST00000533900 DNAJC5BQ9UF47 199 aa39.98■■■■□ 3.99
DKK3-214ENST00000533900 ZCCHC6Q5VYS8 1495 aaKnown RBP39.83■■■■□ 3.97
DKK3-214ENST00000533900 RB1CC1Q8TDY2 1594 aa39.83■■■■□ 3.97
DKK3-214ENST00000533900 NACADO15069 1562 aa39.81■■■■□ 3.96
DKK3-214ENST00000533900 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
DKK3-214ENST00000533900 DCAF8L2P0C7V8 631 aa39.59■■■■□ 3.93
DKK3-214ENST00000533900 DCAF1Q9Y4B6 1507 aa39.55■■■■□ 3.92
DKK3-214ENST00000533900 PABPN1Q86U42 306 aaKnown RBP eCLIP39.17■■■■□ 3.86
DKK3-214ENST00000533900 UNC13AQ9UPW8 1703 aa39.04■■■■□ 3.84
DKK3-214ENST00000533900 BICRAQ9NZM4 1560 aa38.77■■■■□ 3.8
DKK3-214ENST00000533900 SCRIBQ14160 1630 aa38.7■■■■□ 3.79
DKK3-214ENST00000533900 SHROOM4Q9ULL8 1493 aa38.27■■■■□ 3.72
DKK3-214ENST00000533900 CC2D2AQ9P2K1 1620 aa38.02■■■■□ 3.68
DKK3-214ENST00000533900 CECR2Q9BXF3 1484 aa37.96■■■■□ 3.67
DKK3-214ENST00000533900 EIF4G1Q04637 1599 aaKnown RBP37.82■■■■□ 3.65
DKK3-214ENST00000533900 SMARCA4P51532 1647 aa37.06■■■■□ 3.52
DKK3-214ENST00000533900 BAZ1AQ9NRL2 1556 aaPredicted RBP37.02■■■■□ 3.52
DKK3-214ENST00000533900 DNAJC5Q9H3Z4 198 aa36.92■■■■□ 3.5
DKK3-214ENST00000533900 SMARCA2P51531 1590 aa36.76■■■■□ 3.48
DKK3-214ENST00000533900 MROH2BQ7Z745 1585 aa36.76■■■■□ 3.48
DKK3-214ENST00000533900 ATAD2BQ9ULI0 1458 aa36.71■■■■□ 3.47
DKK3-214ENST00000533900 PEG3Q9GZU2 1588 aa36.7■■■■□ 3.46
DKK3-214ENST00000533900 NCAPD3P42695 1498 aa36.65■■■■□ 3.46
DKK3-214ENST00000533900 HMGXB3Q12766 1538 aa36.6■■■■□ 3.45
DKK3-214ENST00000533900 BAZ1BQ9UIG0 1483 aaKnown RBP36.46■■■■□ 3.43
DKK3-214ENST00000533900 WIZO95785 1651 aa36.43■■■■□ 3.42
DKK3-214ENST00000533900 CUX2O14529 1486 aa36.41■■■■□ 3.42
DKK3-214ENST00000533900 RSF1Q96T23 1441 aaPredicted RBP36.37■■■■□ 3.41
DKK3-214ENST00000533900 ERCC6Q03468 1493 aa36.35■■■■□ 3.41
DKK3-214ENST00000533900 NESP48681 1621 aa36.1■■■■□ 3.37
DKK3-214ENST00000533900 TOP2AP11388 1531 aaKnown RBP36.08■■■■□ 3.37
DKK3-214ENST00000533900 THOC2Q8NI27 1593 aaKnown RBP35.8■■■■□ 3.32
DKK3-214ENST00000533900 LAMC3Q9Y6N6 1575 aa35.76■■■■□ 3.31
DKK3-214ENST00000533900 KIF21AQ7Z4S6 1674 aa35.59■■■■□ 3.29
DKK3-214ENST00000533900 CADPSQ9ULU8 1353 aa35.57■■■■□ 3.28
DKK3-214ENST00000533900 CCDC88BA6NC98 1476 aa35.55■■■■□ 3.28
DKK3-214ENST00000533900 SUPT5HO00267 1087 aaKnown RBP35.5■■■■□ 3.27
DKK3-214ENST00000533900 PRDM2Q13029 1718 aa35.45■■■■□ 3.27
DKK3-214ENST00000533900 CFTRP13569 1480 aa35.44■■■■□ 3.26
DKK3-214ENST00000533900 PDS5BQ9NTI5 1447 aa35.44■■■■□ 3.26
DKK3-214ENST00000533900 MRC2Q9UBG0 1479 aa35.22■■■■□ 3.23
DKK3-214ENST00000533900 FANCD2Q9BXW9 1451 aa35.21■■■■□ 3.23
DKK3-214ENST00000533900 TRIM41Q8WV44 630 aa35.18■■■■□ 3.22
DKK3-214ENST00000533900 WDR62O43379 1518 aa35.17■■■■□ 3.22
DKK3-214ENST00000533900 CEP164Q9UPV0 1460 aa35.17■■■■□ 3.22
DKK3-214ENST00000533900 URB2Q14146 1524 aaKnown RBP34.85■■■■□ 3.17
DKK3-214ENST00000533900 DNMBPQ6XZF7 1577 aa34.72■■■■□ 3.15
DKK3-214ENST00000533900 ABCC8Q09428 1581 aa34.71■■■■□ 3.15
DKK3-214ENST00000533900 TOPBP1Q92547 1522 aa34.69■■■■□ 3.14
DKK3-214ENST00000533900 OSCARQ8IYS5 282 aa34.65■■■■□ 3.14
DKK3-214ENST00000533900 CUX1P39880 1505 aa34.5■■■■□ 3.11
DKK3-214ENST00000533900 IFT140Q96RY7 1462 aa34.42■■■■□ 3.1
DKK3-214ENST00000533900 POLA1P09884 1462 aaPredicted RBP34.39■■■■□ 3.1
DKK3-214ENST00000533900 ZNF608Q9ULD9 1512 aaPredicted RBP34.37■■■■□ 3.09
DKK3-214ENST00000533900 RIMBP3CA6NJZ7 1639 aa34.35■■■■□ 3.09
DKK3-214ENST00000533900 RIMBP3BA6NNM3 1639 aa34.35■■■■□ 3.09
DKK3-214ENST00000533900 RIMBP3Q9UFD9 1639 aa34.35■■■■□ 3.09
DKK3-214ENST00000533900 BIVM-ERCC5R4GMW8 1640 aa34.35■■■■□ 3.09
DKK3-214ENST00000533900 FGD5Q6ZNL6 1462 aa34.34■■■■□ 3.09
DKK3-214ENST00000533900 TARBP1Q13395 1621 aaKnown RBP34.33■■■■□ 3.09
DKK3-214ENST00000533900 WRNQ14191 1432 aaPredicted RBP eCLIP34.32■■■■□ 3.08
DKK3-214ENST00000533900 TOP2BQ02880 1626 aa34.31■■■■□ 3.08
DKK3-214ENST00000533900 SYNJ1O43426 1573 aa34.29■■■■□ 3.08
DKK3-214ENST00000533900 SOGA1O94964 1423 aa34.2■■■■□ 3.06
DKK3-214ENST00000533900 RAD54L2Q9Y4B4 1467 aa34.2■■■■□ 3.06
DKK3-214ENST00000533900 EIF4G3O43432 1585 aaKnown RBP34.19■■■■□ 3.06
DKK3-214ENST00000533900 WDR97A6NE52 1622 aa34.19■■■■□ 3.06
DKK3-214ENST00000533900 ARHGEF11O15085 1522 aa34.19■■■■□ 3.06
DKK3-214ENST00000533900 ABCA10Q8WWZ4 1543 aa34.04■■■■□ 3.04
DKK3-214ENST00000533900 AQRO60306 1485 aaKnown RBP eCLIP34.01■■■■□ 3.03
DKK3-214ENST00000533900 CHD1O14646 1710 aa33.97■■■■□ 3.03
DKK3-214ENST00000533900 ABCA5Q8WWZ7 1642 aa33.96■■■■□ 3.03
DKK3-214ENST00000533900 TDRD9Q8NDG6 1382 aaKnown RBP33.95■■■■□ 3.02
DKK3-214ENST00000533900 CYB5RLQ6IPT4 315 aa33.94■■■■□ 3.02
DKK3-214ENST00000533900 PBRM1Q86U86 1689 aa33.93■■■■□ 3.02
DKK3-214ENST00000533900 GAPVD1Q14C86 1478 aa33.86■■■■□ 3.01
DKK3-214ENST00000533900 ARAP1Q96P48 1450 aa33.84■■■■□ 3.01
DKK3-214ENST00000533900 GRIN2BQ13224 1484 aa33.83■■■■□ 3.01
DKK3-214ENST00000533900 FBLN2P98095 1184 aa33.8■■■■□ 3
DKK3-214ENST00000533900 SNAPC4Q5SXM2 1469 aa33.76■■■■□ 3
DKK3-214ENST00000533900 MAGI1Q96QZ7 1491 aaPredicted RBP33.76■■■■□ 3
DKK3-214ENST00000533900 TRHP20396 242 aaPredicted RBP33.68■■■□□ 2.98
DKK3-214ENST00000533900 ERICH3Q5RHP9 1530 aa33.67■■■□□ 2.98
DKK3-214ENST00000533900 ADAMTS12P58397 1594 aa33.61■■■□□ 2.97
DKK3-214ENST00000533900 SYNJ2O15056 1496 aa33.6■■■□□ 2.97
DKK3-214ENST00000533900 KIF27Q86VH2 1401 aa33.59■■■□□ 2.97
DKK3-214ENST00000533900 CLASP1Q7Z460 1538 aa33.55■■■□□ 2.96
DKK3-214ENST00000533900 FHAD1B1AJZ9 1412 aa33.47■■■□□ 2.95
DKK3-214ENST00000533900 CHMP7Q8WUX9 453 aaPredicted RBP33.47■■■□□ 2.95
DKK3-214ENST00000533900 CUL7Q14999 1698 aa33.47■■■□□ 2.95
DKK3-214ENST00000533900 GRIN2AQ12879 1464 aa33.41■■■□□ 2.94
DKK3-214ENST00000533900 IGF1RP08069 1367 aa33.35■■■□□ 2.93
DKK3-214ENST00000533900 RUSC2Q8N2Y8 1516 aa33.28■■■□□ 2.92
DKK3-214ENST00000533900 CEP170Q5SW79 1584 aa33.26■■■□□ 2.92
DKK3-214ENST00000533900 CHIC1Q5VXU3 224 aa33.26■■■□□ 2.91
DKK3-214ENST00000533900 NUP160Q12769 1436 aa33.24■■■□□ 2.91
DKK3-214ENST00000533900 CARMIL1Q5VZK9 1371 aa33.2■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms