RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 NISCHQ9Y2I1 1504 aa43.4■■■■■ 4.54
CAPN5-207ENST00000533889 CCDC180Q9P1Z9 1646 aa38.79■■■■□ 3.8
CAPN5-207ENST00000533889 ABCC9O60706 1549 aa38.64■■■■□ 3.78
CAPN5-207ENST00000533889 RB1CC1Q8TDY2 1594 aa36.86■■■■□ 3.49
CAPN5-207ENST00000533889 DCAF8L2P0C7V8 631 aa36.71■■■■□ 3.47
CAPN5-207ENST00000533889 NACADO15069 1562 aa36.66■■■■□ 3.46
CAPN5-207ENST00000533889 MYO15BQ96JP2 1530 aa36.19■■■■□ 3.38
CAPN5-207ENST00000533889 PABPN1Q86U42 306 aaKnown RBP eCLIP36.07■■■■□ 3.36
CAPN5-207ENST00000533889 DNAJC5BQ9UF47 199 aa36.03■■■■□ 3.36
CAPN5-207ENST00000533889 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
CAPN5-207ENST00000533889 UNC13AQ9UPW8 1703 aa35.97■■■■□ 3.35
CAPN5-207ENST00000533889 DCAF1Q9Y4B6 1507 aa35.83■■■■□ 3.33
CAPN5-207ENST00000533889 BICRAQ9NZM4 1560 aa35.72■■■■□ 3.31
CAPN5-207ENST00000533889 SCRIBQ14160 1630 aa35.43■■■■□ 3.26
CAPN5-207ENST00000533889 SHROOM4Q9ULL8 1493 aa35.26■■■■□ 3.23
CAPN5-207ENST00000533889 CC2D2AQ9P2K1 1620 aa34.88■■■■□ 3.17
CAPN5-207ENST00000533889 EIF4G1Q04637 1599 aaKnown RBP34.86■■■■□ 3.17
CAPN5-207ENST00000533889 CECR2Q9BXF3 1484 aa34.78■■■■□ 3.16
CAPN5-207ENST00000533889 NCAPD3P42695 1498 aa33.84■■■■□ 3.01
CAPN5-207ENST00000533889 SMARCA4P51532 1647 aa33.79■■■■□ 3
CAPN5-207ENST00000533889 ATAD2BQ9ULI0 1458 aa33.78■■■■□ 3
CAPN5-207ENST00000533889 SMARCA2P51531 1590 aa33.7■■■□□ 2.99
CAPN5-207ENST00000533889 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
CAPN5-207ENST00000533889 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
CAPN5-207ENST00000533889 BAZ1BQ9UIG0 1483 aaKnown RBP33.49■■■□□ 2.95
CAPN5-207ENST00000533889 MROH2BQ7Z745 1585 aa33.45■■■□□ 2.95
CAPN5-207ENST00000533889 PEG3Q9GZU2 1588 aa33.43■■■□□ 2.94
CAPN5-207ENST00000533889 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
CAPN5-207ENST00000533889 NESP48681 1621 aa33.24■■■□□ 2.91
CAPN5-207ENST00000533889 CUX2O14529 1486 aa33.16■■■□□ 2.9
CAPN5-207ENST00000533889 WIZO95785 1651 aa33.07■■■□□ 2.88
CAPN5-207ENST00000533889 LAMC3Q9Y6N6 1575 aa33.04■■■□□ 2.88
CAPN5-207ENST00000533889 DNAJC5Q9H3Z4 198 aa32.91■■■□□ 2.86
CAPN5-207ENST00000533889 PDS5BQ9NTI5 1447 aa32.88■■■□□ 2.85
CAPN5-207ENST00000533889 RSF1Q96T23 1441 aaPredicted RBP32.86■■■□□ 2.85
CAPN5-207ENST00000533889 CADPSQ9ULU8 1353 aa32.85■■■□□ 2.85
CAPN5-207ENST00000533889 THOC2Q8NI27 1593 aaKnown RBP32.79■■■□□ 2.84
CAPN5-207ENST00000533889 KIF21AQ7Z4S6 1674 aa32.79■■■□□ 2.84
CAPN5-207ENST00000533889 TOP2AP11388 1531 aaKnown RBP32.65■■■□□ 2.82
CAPN5-207ENST00000533889 MRC2Q9UBG0 1479 aa32.55■■■□□ 2.8
CAPN5-207ENST00000533889 CFTRP13569 1480 aa32.5■■■□□ 2.79
CAPN5-207ENST00000533889 CEP164Q9UPV0 1460 aa32.48■■■□□ 2.79
CAPN5-207ENST00000533889 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
CAPN5-207ENST00000533889 WDR62O43379 1518 aa32.43■■■□□ 2.78
CAPN5-207ENST00000533889 CCDC88BA6NC98 1476 aa32.31■■■□□ 2.76
CAPN5-207ENST00000533889 URB2Q14146 1524 aaKnown RBP32.16■■■□□ 2.74
CAPN5-207ENST00000533889 PRDM2Q13029 1718 aa32.15■■■□□ 2.74
CAPN5-207ENST00000533889 TOPBP1Q92547 1522 aa31.87■■■□□ 2.69
CAPN5-207ENST00000533889 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
CAPN5-207ENST00000533889 IFT140Q96RY7 1462 aa31.83■■■□□ 2.69
CAPN5-207ENST00000533889 OSCARQ8IYS5 282 aa31.78■■■□□ 2.68
CAPN5-207ENST00000533889 DNMBPQ6XZF7 1577 aa31.77■■■□□ 2.68
CAPN5-207ENST00000533889 ZNF608Q9ULD9 1512 aaPredicted RBP31.75■■■□□ 2.67
CAPN5-207ENST00000533889 SUPT5HO00267 1087 aaKnown RBP31.73■■■□□ 2.67
CAPN5-207ENST00000533889 TRIM41Q8WV44 630 aa31.65■■■□□ 2.66
CAPN5-207ENST00000533889 POLA1P09884 1462 aaPredicted RBP31.56■■■□□ 2.64
CAPN5-207ENST00000533889 EIF4G3O43432 1585 aaKnown RBP31.56■■■□□ 2.64
CAPN5-207ENST00000533889 TARBP1Q13395 1621 aaKnown RBP31.54■■■□□ 2.64
CAPN5-207ENST00000533889 AQRO60306 1485 aaKnown RBP eCLIP31.52■■■□□ 2.64
CAPN5-207ENST00000533889 SOGA1O94964 1423 aa31.48■■■□□ 2.63
CAPN5-207ENST00000533889 RAD54L2Q9Y4B4 1467 aa31.47■■■□□ 2.63
CAPN5-207ENST00000533889 FGD5Q6ZNL6 1462 aa31.41■■■□□ 2.62
CAPN5-207ENST00000533889 CUX1P39880 1505 aa31.4■■■□□ 2.62
CAPN5-207ENST00000533889 TDRD9Q8NDG6 1382 aaKnown RBP31.39■■■□□ 2.62
CAPN5-207ENST00000533889 FBLN2P98095 1184 aa31.36■■■□□ 2.61
CAPN5-207ENST00000533889 CHD1O14646 1710 aa31.28■■■□□ 2.6
CAPN5-207ENST00000533889 RIMBP3CA6NJZ7 1639 aa31.25■■■□□ 2.59
CAPN5-207ENST00000533889 RIMBP3BA6NNM3 1639 aa31.25■■■□□ 2.59
CAPN5-207ENST00000533889 RIMBP3Q9UFD9 1639 aa31.25■■■□□ 2.59
CAPN5-207ENST00000533889 WDR97A6NE52 1622 aa31.23■■■□□ 2.59
CAPN5-207ENST00000533889 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
CAPN5-207ENST00000533889 SNAPC4Q5SXM2 1469 aa31.18■■■□□ 2.58
CAPN5-207ENST00000533889 GRIN2BQ13224 1484 aa31.14■■■□□ 2.58
CAPN5-207ENST00000533889 CHMP7Q8WUX9 453 aaPredicted RBP31.14■■■□□ 2.58
CAPN5-207ENST00000533889 MAGI1Q96QZ7 1491 aaPredicted RBP31.1■■■□□ 2.57
CAPN5-207ENST00000533889 GAPVD1Q14C86 1478 aa31.08■■■□□ 2.57
CAPN5-207ENST00000533889 ABCA10Q8WWZ4 1543 aa31.05■■■□□ 2.56
CAPN5-207ENST00000533889 CYB5RLQ6IPT4 315 aa31.05■■■□□ 2.56
CAPN5-207ENST00000533889 WRNQ14191 1432 aaPredicted RBP eCLIP31.03■■■□□ 2.56
CAPN5-207ENST00000533889 SYNJ2O15056 1496 aa31.01■■■□□ 2.55
CAPN5-207ENST00000533889 PBRM1Q86U86 1689 aa31■■■□□ 2.55
CAPN5-207ENST00000533889 TOP2BQ02880 1626 aa30.97■■■□□ 2.55
CAPN5-207ENST00000533889 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
CAPN5-207ENST00000533889 ABCA5Q8WWZ7 1642 aa30.95■■■□□ 2.55
CAPN5-207ENST00000533889 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.54
CAPN5-207ENST00000533889 CLASP1Q7Z460 1538 aa30.9■■■□□ 2.54
CAPN5-207ENST00000533889 ARAP1Q96P48 1450 aa30.89■■■□□ 2.53
CAPN5-207ENST00000533889 GRIN2AQ12879 1464 aa30.73■■■□□ 2.51
CAPN5-207ENST00000533889 ADAMTS12P58397 1594 aa30.71■■■□□ 2.51
CAPN5-207ENST00000533889 FHAD1B1AJZ9 1412 aa30.69■■■□□ 2.5
CAPN5-207ENST00000533889 ERICH3Q5RHP9 1530 aa30.67■■■□□ 2.5
CAPN5-207ENST00000533889 TRHP20396 242 aaPredicted RBP30.66■■■□□ 2.5
CAPN5-207ENST00000533889 NUP160Q12769 1436 aa30.59■■■□□ 2.49
CAPN5-207ENST00000533889 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
CAPN5-207ENST00000533889 ERCC6L2Q5T890 1561 aa30.47■■■□□ 2.47
CAPN5-207ENST00000533889 KIF27Q86VH2 1401 aa30.43■■■□□ 2.46
CAPN5-207ENST00000533889 SHROOM2Q13796 1616 aa30.4■■■□□ 2.46
CAPN5-207ENST00000533889 JPH4Q96JJ6 628 aa30.38■■■□□ 2.45
CAPN5-207ENST00000533889 IGF1RP08069 1367 aa30.38■■■□□ 2.45
CAPN5-207ENST00000533889 PRG4Q92954 1404 aaPredicted RBP30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms