RNA–Protein interactions for RNA: ENST00000533840.1

THY1-208, Transcript of Thy-1 cell surface antigen, humanhuman

TSL 2

Gene THY1, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THY1-208ENST00000533840 NISCHQ9Y2I1 1504 aa33.8■■■■□ 3
THY1-208ENST00000533840 ABCC9O60706 1549 aa30.5■■■□□ 2.47
THY1-208ENST00000533840 CCDC180Q9P1Z9 1646 aa30.27■■■□□ 2.44
THY1-208ENST00000533840 RB1CC1Q8TDY2 1594 aa28.87■■■□□ 2.21
THY1-208ENST00000533840 DNAJC5BQ9UF47 199 aa28.82■■■□□ 2.2
THY1-208ENST00000533840 NACADO15069 1562 aa28.65■■■□□ 2.18
THY1-208ENST00000533840 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
THY1-208ENST00000533840 PABPN1Q86U42 306 aaKnown RBP eCLIP28.43■■■□□ 2.14
THY1-208ENST00000533840 UNC13AQ9UPW8 1703 aa28.32■■■□□ 2.12
THY1-208ENST00000533840 MYO15BQ96JP2 1530 aa28.22■■■□□ 2.11
THY1-208ENST00000533840 BICRAQ9NZM4 1560 aa28.18■■■□□ 2.1
THY1-208ENST00000533840 ZCCHC6Q5VYS8 1495 aaKnown RBP28■■■□□ 2.07
THY1-208ENST00000533840 DCAF1Q9Y4B6 1507 aa27.85■■■□□ 2.05
THY1-208ENST00000533840 SCRIBQ14160 1630 aa27.69■■■□□ 2.02
THY1-208ENST00000533840 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
THY1-208ENST00000533840 CC2D2AQ9P2K1 1620 aa27.51■■□□□ 1.99
THY1-208ENST00000533840 CECR2Q9BXF3 1484 aa27.44■■□□□ 1.98
THY1-208ENST00000533840 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
THY1-208ENST00000533840 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
THY1-208ENST00000533840 ATAD2BQ9ULI0 1458 aa26.45■■□□□ 1.82
THY1-208ENST00000533840 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
THY1-208ENST00000533840 SMARCA4P51532 1647 aa26.38■■□□□ 1.81
THY1-208ENST00000533840 SMARCA2P51531 1590 aa26.27■■□□□ 1.8
THY1-208ENST00000533840 HMGXB3Q12766 1538 aa26.26■■□□□ 1.79
THY1-208ENST00000533840 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
THY1-208ENST00000533840 NESP48681 1621 aa26.22■■□□□ 1.79
THY1-208ENST00000533840 CUX2O14529 1486 aa26.21■■□□□ 1.79
THY1-208ENST00000533840 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
THY1-208ENST00000533840 BAZ1BQ9UIG0 1483 aaKnown RBP26.13■■□□□ 1.77
THY1-208ENST00000533840 MROH2BQ7Z745 1585 aa26.11■■□□□ 1.77
THY1-208ENST00000533840 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
THY1-208ENST00000533840 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
THY1-208ENST00000533840 LAMC3Q9Y6N6 1575 aa25.87■■□□□ 1.73
THY1-208ENST00000533840 KIF21AQ7Z4S6 1674 aa25.81■■□□□ 1.72
THY1-208ENST00000533840 WIZO95785 1651 aa25.77■■□□□ 1.72
THY1-208ENST00000533840 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
THY1-208ENST00000533840 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
THY1-208ENST00000533840 MRC2Q9UBG0 1479 aa25.54■■□□□ 1.68
THY1-208ENST00000533840 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
THY1-208ENST00000533840 WDR62O43379 1518 aa25.49■■□□□ 1.67
THY1-208ENST00000533840 FANCD2Q9BXW9 1451 aa25.41■■□□□ 1.66
THY1-208ENST00000533840 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
THY1-208ENST00000533840 CFTRP13569 1480 aa25.4■■□□□ 1.66
THY1-208ENST00000533840 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
THY1-208ENST00000533840 URB2Q14146 1524 aaKnown RBP25.27■■□□□ 1.64
THY1-208ENST00000533840 TRIM41Q8WV44 630 aa25.2■■□□□ 1.62
THY1-208ENST00000533840 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
THY1-208ENST00000533840 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
THY1-208ENST00000533840 OSCARQ8IYS5 282 aa25.02■■□□□ 1.6
THY1-208ENST00000533840 ZNF608Q9ULD9 1512 aaPredicted RBP24.99■■□□□ 1.59
THY1-208ENST00000533840 TOPBP1Q92547 1522 aa24.94■■□□□ 1.58
THY1-208ENST00000533840 IFT140Q96RY7 1462 aa24.9■■□□□ 1.58
THY1-208ENST00000533840 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
THY1-208ENST00000533840 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
THY1-208ENST00000533840 RIMBP3CA6NJZ7 1639 aa24.76■■□□□ 1.55
THY1-208ENST00000533840 RIMBP3BA6NNM3 1639 aa24.76■■□□□ 1.55
THY1-208ENST00000533840 RIMBP3Q9UFD9 1639 aa24.76■■□□□ 1.55
THY1-208ENST00000533840 ABCC8Q09428 1581 aa24.75■■□□□ 1.55
THY1-208ENST00000533840 TARBP1Q13395 1621 aaKnown RBP24.74■■□□□ 1.55
THY1-208ENST00000533840 AQRO60306 1485 aaKnown RBP eCLIP24.73■■□□□ 1.55
THY1-208ENST00000533840 POLA1P09884 1462 aaPredicted RBP24.68■■□□□ 1.54
THY1-208ENST00000533840 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
THY1-208ENST00000533840 RAD54L2Q9Y4B4 1467 aa24.65■■□□□ 1.54
THY1-208ENST00000533840 CHD1O14646 1710 aa24.61■■□□□ 1.53
THY1-208ENST00000533840 TDRD9Q8NDG6 1382 aaKnown RBP24.56■■□□□ 1.52
THY1-208ENST00000533840 SOGA1O94964 1423 aa24.54■■□□□ 1.52
THY1-208ENST00000533840 CUX1P39880 1505 aa24.52■■□□□ 1.52
THY1-208ENST00000533840 FBLN2P98095 1184 aa24.52■■□□□ 1.52
THY1-208ENST00000533840 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
THY1-208ENST00000533840 CYB5RLQ6IPT4 315 aa24.5■■□□□ 1.51
THY1-208ENST00000533840 ARAP1Q96P48 1450 aa24.45■■□□□ 1.51
THY1-208ENST00000533840 SNAPC4Q5SXM2 1469 aa24.45■■□□□ 1.5
THY1-208ENST00000533840 CLASP1Q7Z460 1538 aa24.34■■□□□ 1.49
THY1-208ENST00000533840 WDR97A6NE52 1622 aa24.33■■□□□ 1.49
THY1-208ENST00000533840 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
THY1-208ENST00000533840 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
THY1-208ENST00000533840 MAGI1Q96QZ7 1491 aaPredicted RBP24.3■■□□□ 1.48
THY1-208ENST00000533840 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
THY1-208ENST00000533840 SYNJ2O15056 1496 aa24.25■■□□□ 1.47
THY1-208ENST00000533840 GAPVD1Q14C86 1478 aa24.24■■□□□ 1.47
THY1-208ENST00000533840 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
THY1-208ENST00000533840 PBRM1Q86U86 1689 aa24.22■■□□□ 1.47
THY1-208ENST00000533840 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.47
THY1-208ENST00000533840 TRHP20396 242 aaPredicted RBP24.2■■□□□ 1.46
THY1-208ENST00000533840 ABCA5Q8WWZ7 1642 aa24.19■■□□□ 1.46
THY1-208ENST00000533840 ERCC6L2Q5T890 1561 aa24.05■■□□□ 1.44
THY1-208ENST00000533840 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
THY1-208ENST00000533840 BIVM-ERCC5R4GMW8 1640 aa24.04■■□□□ 1.44
THY1-208ENST00000533840 TOP2BQ02880 1626 aa24.03■■□□□ 1.44
THY1-208ENST00000533840 GRIN2AQ12879 1464 aa24.02■■□□□ 1.44
THY1-208ENST00000533840 ADAMTS12P58397 1594 aa24.01■■□□□ 1.43
THY1-208ENST00000533840 CEP170Q5SW79 1584 aa23.99■■□□□ 1.43
THY1-208ENST00000533840 NUP160Q12769 1436 aa23.97■■□□□ 1.43
THY1-208ENST00000533840 FHAD1B1AJZ9 1412 aa23.91■■□□□ 1.42
THY1-208ENST00000533840 ERICH3Q5RHP9 1530 aa23.86■■□□□ 1.41
THY1-208ENST00000533840 SHROOM2Q13796 1616 aa23.86■■□□□ 1.41
THY1-208ENST00000533840 PRG4Q92954 1404 aaPredicted RBP23.74■■□□□ 1.39
THY1-208ENST00000533840 JPH4Q96JJ6 628 aa23.71■■□□□ 1.39
THY1-208ENST00000533840 RUSC2Q8N2Y8 1516 aa23.67■■□□□ 1.38
THY1-208ENST00000533840 IGF1RP08069 1367 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms