RNA–Protein interactions for RNA: ENST00000533695.1

LRP5-207, Transcript of LDL receptor related protein 5, humanhuman

TSL 3

Gene LRP5, Length 267 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-207ENST00000533695 NISCHQ9Y2I1 1504 aa43.66■■■■■ 4.58
LRP5-207ENST00000533695 CCDC180Q9P1Z9 1646 aa39.29■■■■□ 3.88
LRP5-207ENST00000533695 ABCC9O60706 1549 aa39.25■■■■□ 3.87
LRP5-207ENST00000533695 RB1CC1Q8TDY2 1594 aa37.32■■■■□ 3.56
LRP5-207ENST00000533695 NACADO15069 1562 aa37.05■■■■□ 3.52
LRP5-207ENST00000533695 DNAJC5BQ9UF47 199 aa36.98■■■■□ 3.51
LRP5-207ENST00000533695 UNC13AQ9UPW8 1703 aa36.8■■■■□ 3.48
LRP5-207ENST00000533695 DCAF8L2P0C7V8 631 aa36.59■■■■□ 3.45
LRP5-207ENST00000533695 MYO15BQ96JP2 1530 aa36.54■■■■□ 3.44
LRP5-207ENST00000533695 PABPN1Q86U42 306 aaKnown RBP eCLIP36.46■■■■□ 3.43
LRP5-207ENST00000533695 BICRAQ9NZM4 1560 aa36.44■■■■□ 3.42
LRP5-207ENST00000533695 ZCCHC6Q5VYS8 1495 aaKnown RBP36.19■■■■□ 3.38
LRP5-207ENST00000533695 DCAF1Q9Y4B6 1507 aa36.06■■■■□ 3.36
LRP5-207ENST00000533695 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
LRP5-207ENST00000533695 SHROOM4Q9ULL8 1493 aa35.73■■■■□ 3.31
LRP5-207ENST00000533695 CC2D2AQ9P2K1 1620 aa35.54■■■■□ 3.28
LRP5-207ENST00000533695 EIF4G1Q04637 1599 aaKnown RBP35.42■■■■□ 3.26
LRP5-207ENST00000533695 CECR2Q9BXF3 1484 aa35.34■■■■□ 3.25
LRP5-207ENST00000533695 NCAPD3P42695 1498 aa34.2■■■■□ 3.07
LRP5-207ENST00000533695 SMARCA4P51532 1647 aa34.13■■■■□ 3.05
LRP5-207ENST00000533695 ATAD2BQ9ULI0 1458 aa34.12■■■■□ 3.05
LRP5-207ENST00000533695 HMGXB3Q12766 1538 aa33.99■■■■□ 3.03
LRP5-207ENST00000533695 SMARCA2P51531 1590 aa33.97■■■■□ 3.03
LRP5-207ENST00000533695 DNAJC5Q9H3Z4 198 aa33.87■■■■□ 3.01
LRP5-207ENST00000533695 BAZ1AQ9NRL2 1556 aaPredicted RBP33.85■■■■□ 3.01
LRP5-207ENST00000533695 CUX2O14529 1486 aa33.82■■■■□ 3.01
LRP5-207ENST00000533695 PEG3Q9GZU2 1588 aa33.81■■■■□ 3
LRP5-207ENST00000533695 NESP48681 1621 aa33.78■■■■□ 3
LRP5-207ENST00000533695 ERCC6Q03468 1493 aa33.77■■■■□ 3
LRP5-207ENST00000533695 BAZ1BQ9UIG0 1483 aaKnown RBP33.71■■■□□ 2.99
LRP5-207ENST00000533695 MROH2BQ7Z745 1585 aa33.68■■■□□ 2.98
LRP5-207ENST00000533695 THOC2Q8NI27 1593 aaKnown RBP33.52■■■□□ 2.96
LRP5-207ENST00000533695 LAMC3Q9Y6N6 1575 aa33.47■■■□□ 2.95
LRP5-207ENST00000533695 KIF21AQ7Z4S6 1674 aa33.44■■■□□ 2.94
LRP5-207ENST00000533695 WIZO95785 1651 aa33.33■■■□□ 2.93
LRP5-207ENST00000533695 PDS5BQ9NTI5 1447 aa33.14■■■□□ 2.9
LRP5-207ENST00000533695 CADPSQ9ULU8 1353 aa33.1■■■□□ 2.89
LRP5-207ENST00000533695 MRC2Q9UBG0 1479 aa32.96■■■□□ 2.87
LRP5-207ENST00000533695 WDR62O43379 1518 aa32.96■■■□□ 2.87
LRP5-207ENST00000533695 RSF1Q96T23 1441 aaPredicted RBP32.89■■■□□ 2.86
LRP5-207ENST00000533695 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.84
LRP5-207ENST00000533695 CEP164Q9UPV0 1460 aa32.79■■■□□ 2.84
LRP5-207ENST00000533695 CFTRP13569 1480 aa32.78■■■□□ 2.84
LRP5-207ENST00000533695 FANCD2Q9BXW9 1451 aa32.76■■■□□ 2.84
LRP5-207ENST00000533695 PRDM2Q13029 1718 aa32.65■■■□□ 2.82
LRP5-207ENST00000533695 URB2Q14146 1524 aaKnown RBP32.6■■■□□ 2.81
LRP5-207ENST00000533695 CCDC88BA6NC98 1476 aa32.43■■■□□ 2.78
LRP5-207ENST00000533695 TRIM41Q8WV44 630 aa32.26■■■□□ 2.75
LRP5-207ENST00000533695 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.74
LRP5-207ENST00000533695 TOPBP1Q92547 1522 aa32.19■■■□□ 2.74
LRP5-207ENST00000533695 OSCARQ8IYS5 282 aa32.13■■■□□ 2.73
LRP5-207ENST00000533695 IFT140Q96RY7 1462 aa32.12■■■□□ 2.73
LRP5-207ENST00000533695 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
LRP5-207ENST00000533695 EIF4G3O43432 1585 aaKnown RBP32.04■■■□□ 2.72
LRP5-207ENST00000533695 TARBP1Q13395 1621 aaKnown RBP32.01■■■□□ 2.72
LRP5-207ENST00000533695 RIMBP3CA6NJZ7 1639 aa31.99■■■□□ 2.71
LRP5-207ENST00000533695 RIMBP3BA6NNM3 1639 aa31.99■■■□□ 2.71
LRP5-207ENST00000533695 RIMBP3Q9UFD9 1639 aa31.99■■■□□ 2.71
LRP5-207ENST00000533695 ABCC8Q09428 1581 aa31.98■■■□□ 2.71
LRP5-207ENST00000533695 CHD1O14646 1710 aa31.89■■■□□ 2.7
LRP5-207ENST00000533695 POLA1P09884 1462 aaPredicted RBP31.85■■■□□ 2.69
LRP5-207ENST00000533695 AQRO60306 1485 aaKnown RBP eCLIP31.83■■■□□ 2.696e-9■■■■■ 36.9
LRP5-207ENST00000533695 ARHGEF11O15085 1522 aa31.81■■■□□ 2.68
LRP5-207ENST00000533695 RAD54L2Q9Y4B4 1467 aa31.74■■■□□ 2.67
LRP5-207ENST00000533695 CUX1P39880 1505 aa31.65■■■□□ 2.66
LRP5-207ENST00000533695 FGD5Q6ZNL6 1462 aa31.63■■■□□ 2.65
LRP5-207ENST00000533695 SOGA1O94964 1423 aa31.6■■■□□ 2.65
LRP5-207ENST00000533695 WDR97A6NE52 1622 aa31.59■■■□□ 2.65
LRP5-207ENST00000533695 TDRD9Q8NDG6 1382 aaKnown RBP31.57■■■□□ 2.64
LRP5-207ENST00000533695 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
LRP5-207ENST00000533695 SNAPC4Q5SXM2 1469 aa31.5■■■□□ 2.63
LRP5-207ENST00000533695 CLASP1Q7Z460 1538 aa31.47■■■□□ 2.63
LRP5-207ENST00000533695 FBLN2P98095 1184 aa31.43■■■□□ 2.62
LRP5-207ENST00000533695 PBRM1Q86U86 1689 aa31.43■■■□□ 2.62
LRP5-207ENST00000533695 CYB5RLQ6IPT4 315 aa31.41■■■□□ 2.62
LRP5-207ENST00000533695 MAGI1Q96QZ7 1491 aaPredicted RBP31.39■■■□□ 2.62
LRP5-207ENST00000533695 GRIN2BQ13224 1484 aa31.36■■■□□ 2.61
LRP5-207ENST00000533695 ABCA5Q8WWZ7 1642 aa31.33■■■□□ 2.61
LRP5-207ENST00000533695 SYNJ1O43426 1573 aa31.3■■■□□ 2.6
LRP5-207ENST00000533695 SYNJ2O15056 1496 aa31.28■■■□□ 2.6
LRP5-207ENST00000533695 ABCA10Q8WWZ4 1543 aa31.26■■■□□ 2.59
LRP5-207ENST00000533695 GAPVD1Q14C86 1478 aa31.25■■■□□ 2.59
LRP5-207ENST00000533695 CHMP7Q8WUX9 453 aaPredicted RBP31.2■■■□□ 2.59
LRP5-207ENST00000533695 SUPT5HO00267 1087 aaKnown RBP31.19■■■□□ 2.58
LRP5-207ENST00000533695 BIVM-ERCC5R4GMW8 1640 aa31.17■■■□□ 2.58
LRP5-207ENST00000533695 TOP2BQ02880 1626 aa31.11■■■□□ 2.57
LRP5-207ENST00000533695 ADAMTS12P58397 1594 aa31.06■■■□□ 2.56
LRP5-207ENST00000533695 ERCC6L2Q5T890 1561 aa31.02■■■□□ 2.56
LRP5-207ENST00000533695 GRIN2AQ12879 1464 aa31.01■■■□□ 2.55
LRP5-207ENST00000533695 WRNQ14191 1432 aaPredicted RBP eCLIP31■■■□□ 2.55
LRP5-207ENST00000533695 CEP170Q5SW79 1584 aa31■■■□□ 2.55
LRP5-207ENST00000533695 TRHP20396 242 aaPredicted RBP30.99■■■□□ 2.55
LRP5-207ENST00000533695 NUP160Q12769 1436 aa30.93■■■□□ 2.54
LRP5-207ENST00000533695 SHROOM2Q13796 1616 aa30.91■■■□□ 2.54
LRP5-207ENST00000533695 ERICH3Q5RHP9 1530 aa30.85■■■□□ 2.53
LRP5-207ENST00000533695 FHAD1B1AJZ9 1412 aa30.82■■■□□ 2.52
LRP5-207ENST00000533695 RUSC2Q8N2Y8 1516 aa30.64■■■□□ 2.5
LRP5-207ENST00000533695 KIF13AQ9H1H9 1805 aa30.61■■■□□ 2.49
LRP5-207ENST00000533695 PRG4Q92954 1404 aaPredicted RBP30.56■■■□□ 2.48
LRP5-207ENST00000533695 JPH4Q96JJ6 628 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms