RNA–Protein interactions for RNA: ENST00000533673.1

CHST1-203, Transcript of carbohydrate sulfotransferase 1, humanhuman

TSL 2

Gene CHST1, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST1-203ENST00000533673 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
CHST1-203ENST00000533673 CCDC180Q9P1Z9 1646 aa25.75■■□□□ 1.71
CHST1-203ENST00000533673 ABCC9O60706 1549 aa25.56■■□□□ 1.68
CHST1-203ENST00000533673 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
CHST1-203ENST00000533673 RB1CC1Q8TDY2 1594 aa24.43■■□□□ 1.5
CHST1-203ENST00000533673 NACADO15069 1562 aa24.34■■□□□ 1.49
CHST1-203ENST00000533673 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
CHST1-203ENST00000533673 MYO15BQ96JP2 1530 aa24.1■■□□□ 1.45
CHST1-203ENST00000533673 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
CHST1-203ENST00000533673 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
CHST1-203ENST00000533673 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
CHST1-203ENST00000533673 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
CHST1-203ENST00000533673 BICRAQ9NZM4 1560 aa23.62■■□□□ 1.37
CHST1-203ENST00000533673 SCRIBQ14160 1630 aa23.6■■□□□ 1.37
CHST1-203ENST00000533673 SHROOM4Q9ULL8 1493 aa23.4■■□□□ 1.34
CHST1-203ENST00000533673 EIF4G1Q04637 1599 aaKnown RBP23.08■■□□□ 1.29
CHST1-203ENST00000533673 CC2D2AQ9P2K1 1620 aa23.02■■□□□ 1.28
CHST1-203ENST00000533673 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
CHST1-203ENST00000533673 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
CHST1-203ENST00000533673 DNAJC5Q9H3Z4 198 aa22.88■■□□□ 1.25
CHST1-203ENST00000533673 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
CHST1-203ENST00000533673 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
CHST1-203ENST00000533673 NCAPD3P42695 1498 aa22.49■■□□□ 1.19
CHST1-203ENST00000533673 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
CHST1-203ENST00000533673 SMARCA2P51531 1590 aa22.43■■□□□ 1.18
CHST1-203ENST00000533673 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
CHST1-203ENST00000533673 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.16
CHST1-203ENST00000533673 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
CHST1-203ENST00000533673 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
CHST1-203ENST00000533673 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
CHST1-203ENST00000533673 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
CHST1-203ENST00000533673 WIZO95785 1651 aa22.06■■□□□ 1.12
CHST1-203ENST00000533673 NESP48681 1621 aa22.02■■□□□ 1.12
CHST1-203ENST00000533673 LAMC3Q9Y6N6 1575 aa21.89■■□□□ 1.09
CHST1-203ENST00000533673 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
CHST1-203ENST00000533673 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
CHST1-203ENST00000533673 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
CHST1-203ENST00000533673 CUX2O14529 1486 aa21.83■■□□□ 1.09
CHST1-203ENST00000533673 CFTRP13569 1480 aa21.66■■□□□ 1.06
CHST1-203ENST00000533673 THOC2Q8NI27 1593 aaKnown RBP21.65■■□□□ 1.06
CHST1-203ENST00000533673 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
CHST1-203ENST00000533673 CCDC88BA6NC98 1476 aa21.63■■□□□ 1.05
CHST1-203ENST00000533673 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
CHST1-203ENST00000533673 CEP164Q9UPV0 1460 aa21.61■■□□□ 1.05
CHST1-203ENST00000533673 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
CHST1-203ENST00000533673 SUPT5HO00267 1087 aaKnown RBP21.52■■□□□ 1.04
CHST1-203ENST00000533673 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
CHST1-203ENST00000533673 WDR62O43379 1518 aa21.48■■□□□ 1.03
CHST1-203ENST00000533673 URB2Q14146 1524 aaKnown RBP21.38■■□□□ 1.01
CHST1-203ENST00000533673 PRDM2Q13029 1718 aa21.29■■□□□ 1
CHST1-203ENST00000533673 TOPBP1Q92547 1522 aa21.22■□□□□ 0.99
CHST1-203ENST00000533673 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
CHST1-203ENST00000533673 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
CHST1-203ENST00000533673 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
CHST1-203ENST00000533673 DNMBPQ6XZF7 1577 aa21.15■□□□□ 0.98
CHST1-203ENST00000533673 ZNF608Q9ULD9 1512 aaPredicted RBP21.07■□□□□ 0.96
CHST1-203ENST00000533673 POLA1P09884 1462 aaPredicted RBP21.03■□□□□ 0.96
CHST1-203ENST00000533673 SOGA1O94964 1423 aa21■□□□□ 0.95
CHST1-203ENST00000533673 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
CHST1-203ENST00000533673 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
CHST1-203ENST00000533673 CUX1P39880 1505 aa20.98■□□□□ 0.95
CHST1-203ENST00000533673 FGD5Q6ZNL6 1462 aa20.97■□□□□ 0.95
CHST1-203ENST00000533673 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.95
CHST1-203ENST00000533673 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
CHST1-203ENST00000533673 TDRD9Q8NDG6 1382 aaKnown RBP20.92■□□□□ 0.94
CHST1-203ENST00000533673 EIF4G3O43432 1585 aaKnown RBP20.92■□□□□ 0.94
CHST1-203ENST00000533673 FBLN2P98095 1184 aa20.87■□□□□ 0.93
CHST1-203ENST00000533673 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
CHST1-203ENST00000533673 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
CHST1-203ENST00000533673 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
CHST1-203ENST00000533673 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
CHST1-203ENST00000533673 CHMP7Q8WUX9 453 aaPredicted RBP20.74■□□□□ 0.91
CHST1-203ENST00000533673 ABCA10Q8WWZ4 1543 aa20.73■□□□□ 0.91
CHST1-203ENST00000533673 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
CHST1-203ENST00000533673 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
CHST1-203ENST00000533673 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
CHST1-203ENST00000533673 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
CHST1-203ENST00000533673 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
CHST1-203ENST00000533673 CHD1O14646 1710 aa20.63■□□□□ 0.89
CHST1-203ENST00000533673 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
CHST1-203ENST00000533673 ABCA5Q8WWZ7 1642 aa20.6■□□□□ 0.89
CHST1-203ENST00000533673 ARHGEF11O15085 1522 aa20.57■□□□□ 0.88
CHST1-203ENST00000533673 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
CHST1-203ENST00000533673 RIMBP3CA6NJZ7 1639 aa20.53■□□□□ 0.88
CHST1-203ENST00000533673 RIMBP3BA6NNM3 1639 aa20.53■□□□□ 0.88
CHST1-203ENST00000533673 RIMBP3Q9UFD9 1639 aa20.53■□□□□ 0.88
CHST1-203ENST00000533673 CYB5RLQ6IPT4 315 aa20.5■□□□□ 0.87
CHST1-203ENST00000533673 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
CHST1-203ENST00000533673 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
CHST1-203ENST00000533673 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
CHST1-203ENST00000533673 CLASP1Q7Z460 1538 aa20.46■□□□□ 0.87
CHST1-203ENST00000533673 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
CHST1-203ENST00000533673 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
CHST1-203ENST00000533673 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
CHST1-203ENST00000533673 NUP160Q12769 1436 aa20.36■□□□□ 0.85
CHST1-203ENST00000533673 IGF1RP08069 1367 aa20.35■□□□□ 0.85
CHST1-203ENST00000533673 CEP170Q5SW79 1584 aa20.33■□□□□ 0.84
CHST1-203ENST00000533673 CARMIL1Q5VZK9 1371 aa20.26■□□□□ 0.83
CHST1-203ENST00000533673 JPH4Q96JJ6 628 aa20.24■□□□□ 0.83
CHST1-203ENST00000533673 CUL7Q14999 1698 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms