RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 NISCHQ9Y2I1 1504 aa51.89■■■■■ 5.9
VPS51-212ENST00000533656 CCDC180Q9P1Z9 1646 aa45.95■■■■■ 4.95
VPS51-212ENST00000533656 ABCC9O60706 1549 aa45.72■■■■■ 4.91
VPS51-212ENST00000533656 RB1CC1Q8TDY2 1594 aa43.57■■■■■ 4.57
VPS51-212ENST00000533656 ZCCHC6Q5VYS8 1495 aaKnown RBP43.37■■■■■ 4.53
VPS51-212ENST00000533656 NACADO15069 1562 aa43.29■■■■■ 4.52
VPS51-212ENST00000533656 DCAF1Q9Y4B6 1507 aa43.06■■■■■ 4.48
VPS51-212ENST00000533656 MYO15BQ96JP2 1530 aa43.05■■■■■ 4.48
VPS51-212ENST00000533656 DCAF8L2P0C7V8 631 aa43.03■■■■■ 4.48
VPS51-212ENST00000533656 UNC13AQ9UPW8 1703 aa42.83■■■■■ 4.45
VPS51-212ENST00000533656 DNAJC5BQ9UF47 199 aa42.68■■■■■ 4.42
VPS51-212ENST00000533656 PABPN1Q86U42 306 aaKnown RBP eCLIP42.54■■■■■ 4.4
VPS51-212ENST00000533656 BICRAQ9NZM4 1560 aa42.41■■■■■ 4.38
VPS51-212ENST00000533656 SCRIBQ14160 1630 aa41.93■■■■■ 4.3
VPS51-212ENST00000533656 SHROOM4Q9ULL8 1493 aa41.68■■■■■ 4.26
VPS51-212ENST00000533656 CC2D2AQ9P2K1 1620 aa41.34■■■■■ 4.21
VPS51-212ENST00000533656 EIF4G1Q04637 1599 aaKnown RBP41.29■■■■■ 4.2
VPS51-212ENST00000533656 CECR2Q9BXF3 1484 aa41.11■■■■■ 4.17
VPS51-212ENST00000533656 BAZ1AQ9NRL2 1556 aaPredicted RBP40.22■■■■■ 4.03
VPS51-212ENST00000533656 SMARCA4P51532 1647 aa40.12■■■■■ 4.01
VPS51-212ENST00000533656 MROH2BQ7Z745 1585 aa39.94■■■■□ 3.98
VPS51-212ENST00000533656 NCAPD3P42695 1498 aa39.94■■■■□ 3.98
VPS51-212ENST00000533656 ATAD2BQ9ULI0 1458 aa39.89■■■■□ 3.98
VPS51-212ENST00000533656 SMARCA2P51531 1590 aa39.81■■■■□ 3.96
VPS51-212ENST00000533656 PEG3Q9GZU2 1588 aa39.79■■■■□ 3.96
VPS51-212ENST00000533656 HMGXB3Q12766 1538 aa39.73■■■■□ 3.95
VPS51-212ENST00000533656 RSF1Q96T23 1441 aaPredicted RBP39.73■■■■□ 3.95
VPS51-212ENST00000533656 BAZ1BQ9UIG0 1483 aaKnown RBP39.52■■■■□ 3.92
VPS51-212ENST00000533656 WIZO95785 1651 aa39.49■■■■□ 3.91
VPS51-212ENST00000533656 ERCC6Q03468 1493 aa39.38■■■■□ 3.9
VPS51-212ENST00000533656 NESP48681 1621 aa39.38■■■■□ 3.89
VPS51-212ENST00000533656 CUX2O14529 1486 aa39.24■■■■□ 3.87
VPS51-212ENST00000533656 TOP2AP11388 1531 aaKnown RBP39.23■■■■□ 3.87
VPS51-212ENST00000533656 LAMC3Q9Y6N6 1575 aa39.07■■■■□ 3.84
VPS51-212ENST00000533656 SUPT5HO00267 1087 aaKnown RBP39.06■■■■□ 3.84
VPS51-212ENST00000533656 THOC2Q8NI27 1593 aaKnown RBP38.98■■■■□ 3.83
VPS51-212ENST00000533656 KIF21AQ7Z4S6 1674 aa38.97■■■■□ 3.83
VPS51-212ENST00000533656 DNAJC5Q9H3Z4 198 aa38.92■■■■□ 3.82
VPS51-212ENST00000533656 PDS5BQ9NTI5 1447 aa38.72■■■■□ 3.79
VPS51-212ENST00000533656 CADPSQ9ULU8 1353 aa38.71■■■■□ 3.79
VPS51-212ENST00000533656 CCDC88BA6NC98 1476 aa38.71■■■■□ 3.79
VPS51-212ENST00000533656 MRC2Q9UBG0 1479 aa38.47■■■■□ 3.75
VPS51-212ENST00000533656 CFTRP13569 1480 aa38.47■■■■□ 3.75
VPS51-212ENST00000533656 WDR62O43379 1518 aa38.42■■■■□ 3.74
VPS51-212ENST00000533656 CEP164Q9UPV0 1460 aa38.35■■■■□ 3.73
VPS51-212ENST00000533656 FANCD2Q9BXW9 1451 aa38.34■■■■□ 3.73
VPS51-212ENST00000533656 PRDM2Q13029 1718 aa38.19■■■■□ 3.7
VPS51-212ENST00000533656 URB2Q14146 1524 aaKnown RBP38.07■■■■□ 3.69
VPS51-212ENST00000533656 ABCC8Q09428 1581 aa37.68■■■■□ 3.62
VPS51-212ENST00000533656 TOPBP1Q92547 1522 aa37.66■■■■□ 3.62
VPS51-212ENST00000533656 DNMBPQ6XZF7 1577 aa37.58■■■■□ 3.61
VPS51-212ENST00000533656 ZNF608Q9ULD9 1512 aaPredicted RBP37.57■■■■□ 3.61
VPS51-212ENST00000533656 IFT140Q96RY7 1462 aa37.56■■■■□ 3.6
VPS51-212ENST00000533656 WRNQ14191 1432 aaPredicted RBP eCLIP37.47■■■■□ 3.59
VPS51-212ENST00000533656 CUX1P39880 1505 aa37.46■■■■□ 3.59
VPS51-212ENST00000533656 EIF4G3O43432 1585 aaKnown RBP37.42■■■■□ 3.58
VPS51-212ENST00000533656 TARBP1Q13395 1621 aaKnown RBP37.39■■■■□ 3.58
VPS51-212ENST00000533656 OSCARQ8IYS5 282 aa37.38■■■■□ 3.57
VPS51-212ENST00000533656 TRIM41Q8WV44 630 aa37.35■■■■□ 3.57
VPS51-212ENST00000533656 TOP2BQ02880 1626 aa37.32■■■■□ 3.56
VPS51-212ENST00000533656 BIVM-ERCC5R4GMW8 1640 aa37.3■■■■□ 3.56
VPS51-212ENST00000533656 POLA1P09884 1462 aaPredicted RBP37.3■■■■□ 3.56
VPS51-212ENST00000533656 SYNJ1O43426 1573 aa37.28■■■■□ 3.56
VPS51-212ENST00000533656 FGD5Q6ZNL6 1462 aa37.25■■■■□ 3.55
VPS51-212ENST00000533656 AQRO60306 1485 aaKnown RBP eCLIP37.2■■■■□ 3.553e-7■■■■□ 21.2
VPS51-212ENST00000533656 RAD54L2Q9Y4B4 1467 aa37.18■■■■□ 3.54
VPS51-212ENST00000533656 CHD1O14646 1710 aa37.16■■■■□ 3.54
VPS51-212ENST00000533656 SOGA1O94964 1423 aa37.13■■■■□ 3.53
VPS51-212ENST00000533656 RIMBP3CA6NJZ7 1639 aa37.1■■■■□ 3.53
VPS51-212ENST00000533656 RIMBP3BA6NNM3 1639 aa37.1■■■■□ 3.53
VPS51-212ENST00000533656 RIMBP3Q9UFD9 1639 aa37.1■■■■□ 3.53
VPS51-212ENST00000533656 TDRD9Q8NDG6 1382 aaKnown RBP36.99■■■■□ 3.51
VPS51-212ENST00000533656 ABCA10Q8WWZ4 1543 aa36.97■■■■□ 3.51
VPS51-212ENST00000533656 WDR97A6NE52 1622 aa36.96■■■■□ 3.51
VPS51-212ENST00000533656 ARHGEF11O15085 1522 aa36.95■■■■□ 3.5
VPS51-212ENST00000533656 SNAPC4Q5SXM2 1469 aa36.87■■■■□ 3.49
VPS51-212ENST00000533656 FBLN2P98095 1184 aa36.82■■■■□ 3.48
VPS51-212ENST00000533656 CHIC1Q5VXU3 224 aa36.82■■■■□ 3.48
VPS51-212ENST00000533656 PBRM1Q86U86 1689 aa36.78■■■■□ 3.48
VPS51-212ENST00000533656 GAPVD1Q14C86 1478 aa36.73■■■■□ 3.47
VPS51-212ENST00000533656 ABCA5Q8WWZ7 1642 aa36.73■■■■□ 3.47
VPS51-212ENST00000533656 GRIN2BQ13224 1484 aa36.72■■■■□ 3.47
VPS51-212ENST00000533656 MAGI1Q96QZ7 1491 aaPredicted RBP36.71■■■■□ 3.47
VPS51-212ENST00000533656 KIF27Q86VH2 1401 aa36.68■■■■□ 3.46
VPS51-212ENST00000533656 CLASP1Q7Z460 1538 aa36.66■■■■□ 3.46
VPS51-212ENST00000533656 ARAP1Q96P48 1450 aa36.62■■■■□ 3.45
VPS51-212ENST00000533656 SYNJ2O15056 1496 aa36.59■■■■□ 3.45
VPS51-212ENST00000533656 CHMP7Q8WUX9 453 aaPredicted RBP36.56■■■■□ 3.44
VPS51-212ENST00000533656 ERICH3Q5RHP9 1530 aa36.55■■■■□ 3.44
VPS51-212ENST00000533656 CYB5RLQ6IPT4 315 aa36.54■■■■□ 3.44
VPS51-212ENST00000533656 EEA1Q15075 1411 aa36.42■■■■□ 3.42
VPS51-212ENST00000533656 IGF1RP08069 1367 aa36.4■■■■□ 3.42
VPS51-212ENST00000533656 ADAMTS12P58397 1594 aa36.39■■■■□ 3.42
VPS51-212ENST00000533656 FHAD1B1AJZ9 1412 aa36.35■■■■□ 3.41
VPS51-212ENST00000533656 RUSC2Q8N2Y8 1516 aa36.35■■■■□ 3.41
VPS51-212ENST00000533656 CUL7Q14999 1698 aa36.32■■■■□ 3.4
VPS51-212ENST00000533656 GRIN2AQ12879 1464 aa36.3■■■■□ 3.4
VPS51-212ENST00000533656 CEP170Q5SW79 1584 aa36.24■■■■□ 3.39
VPS51-212ENST00000533656 CARMIL1Q5VZK9 1371 aa36.22■■■■□ 3.39
VPS51-212ENST00000533656 CSRNP3Q8WYN3 585 aa36.17■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms