RNA–Protein interactions for RNA: ENST00000533645.1

PIK3C2A-205, Transcript of phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha, humanhuman

TSL 5

Gene PIK3C2A, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2A-205ENST00000533645 NISCHQ9Y2I1 1504 aa27.57■■■□□ 2
PIK3C2A-205ENST00000533645 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
PIK3C2A-205ENST00000533645 ABCC9O60706 1549 aa24.36■■□□□ 1.49
PIK3C2A-205ENST00000533645 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
PIK3C2A-205ENST00000533645 NACADO15069 1562 aa23.27■■□□□ 1.32
PIK3C2A-205ENST00000533645 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
PIK3C2A-205ENST00000533645 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
PIK3C2A-205ENST00000533645 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
PIK3C2A-205ENST00000533645 UNC13AQ9UPW8 1703 aa22.92■■□□□ 1.26
PIK3C2A-205ENST00000533645 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
PIK3C2A-205ENST00000533645 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
PIK3C2A-205ENST00000533645 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
PIK3C2A-205ENST00000533645 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
PIK3C2A-205ENST00000533645 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
PIK3C2A-205ENST00000533645 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
PIK3C2A-205ENST00000533645 EIF4G1Q04637 1599 aaKnown RBP22.09■■□□□ 1.13
PIK3C2A-205ENST00000533645 CC2D2AQ9P2K1 1620 aa22.07■■□□□ 1.12
PIK3C2A-205ENST00000533645 CECR2Q9BXF3 1484 aa21.93■■□□□ 1.1
PIK3C2A-205ENST00000533645 SMARCA4P51532 1647 aa21.5■■□□□ 1.03
PIK3C2A-205ENST00000533645 NCAPD3P42695 1498 aa21.42■■□□□ 1.02
PIK3C2A-205ENST00000533645 BAZ1AQ9NRL2 1556 aaPredicted RBP21.41■■□□□ 1.02
PIK3C2A-205ENST00000533645 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
PIK3C2A-205ENST00000533645 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.02
PIK3C2A-205ENST00000533645 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
PIK3C2A-205ENST00000533645 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
PIK3C2A-205ENST00000533645 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
PIK3C2A-205ENST00000533645 BAZ1BQ9UIG0 1483 aaKnown RBP21.22■□□□□ 0.99
PIK3C2A-205ENST00000533645 ERCC6Q03468 1493 aa21.04■□□□□ 0.96
PIK3C2A-205ENST00000533645 WIZO95785 1651 aa21.03■□□□□ 0.96
PIK3C2A-205ENST00000533645 NESP48681 1621 aa21■□□□□ 0.95
PIK3C2A-205ENST00000533645 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
PIK3C2A-205ENST00000533645 CUX2O14529 1486 aa20.94■□□□□ 0.94
PIK3C2A-205ENST00000533645 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
PIK3C2A-205ENST00000533645 KIF21AQ7Z4S6 1674 aa20.84■□□□□ 0.93
PIK3C2A-205ENST00000533645 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.93
PIK3C2A-205ENST00000533645 TOP2AP11388 1531 aaKnown RBP20.79■□□□□ 0.92
PIK3C2A-205ENST00000533645 PDS5BQ9NTI5 1447 aa20.77■□□□□ 0.91
PIK3C2A-205ENST00000533645 CADPSQ9ULU8 1353 aa20.76■□□□□ 0.91
PIK3C2A-205ENST00000533645 MRC2Q9UBG0 1479 aa20.61■□□□□ 0.89
PIK3C2A-205ENST00000533645 CFTRP13569 1480 aa20.6■□□□□ 0.89
PIK3C2A-205ENST00000533645 PRDM2Q13029 1718 aa20.6■□□□□ 0.89
PIK3C2A-205ENST00000533645 WDR62O43379 1518 aa20.58■□□□□ 0.88
PIK3C2A-205ENST00000533645 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
PIK3C2A-205ENST00000533645 FANCD2Q9BXW9 1451 aa20.55■□□□□ 0.88
PIK3C2A-205ENST00000533645 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
PIK3C2A-205ENST00000533645 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
PIK3C2A-205ENST00000533645 URB2Q14146 1524 aaKnown RBP20.38■□□□□ 0.85
PIK3C2A-205ENST00000533645 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
PIK3C2A-205ENST00000533645 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
PIK3C2A-205ENST00000533645 ABCC8Q09428 1581 aa20.19■□□□□ 0.82
PIK3C2A-205ENST00000533645 IFT140Q96RY7 1462 aa20.15■□□□□ 0.82
PIK3C2A-205ENST00000533645 ZNF608Q9ULD9 1512 aaPredicted RBP20.06■□□□□ 0.8
PIK3C2A-205ENST00000533645 EIF4G3O43432 1585 aaKnown RBP20.05■□□□□ 0.8
PIK3C2A-205ENST00000533645 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
PIK3C2A-205ENST00000533645 SUPT5HO00267 1087 aaKnown RBP20.03■□□□□ 0.8
PIK3C2A-205ENST00000533645 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
PIK3C2A-205ENST00000533645 CUX1P39880 1505 aa19.95■□□□□ 0.78
PIK3C2A-205ENST00000533645 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
PIK3C2A-205ENST00000533645 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
PIK3C2A-205ENST00000533645 WDR97A6NE52 1622 aa19.91■□□□□ 0.78
PIK3C2A-205ENST00000533645 RAD54L2Q9Y4B4 1467 aa19.9■□□□□ 0.78
PIK3C2A-205ENST00000533645 CHD1O14646 1710 aa19.89■□□□□ 0.77
PIK3C2A-205ENST00000533645 AQRO60306 1485 aaKnown RBP eCLIP19.88■□□□□ 0.77
PIK3C2A-205ENST00000533645 SOGA1O94964 1423 aa19.88■□□□□ 0.77
PIK3C2A-205ENST00000533645 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
PIK3C2A-205ENST00000533645 PBRM1Q86U86 1689 aa19.77■□□□□ 0.76
PIK3C2A-205ENST00000533645 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
PIK3C2A-205ENST00000533645 RIMBP3CA6NJZ7 1639 aa19.76■□□□□ 0.75
PIK3C2A-205ENST00000533645 RIMBP3BA6NNM3 1639 aa19.76■□□□□ 0.75
PIK3C2A-205ENST00000533645 RIMBP3Q9UFD9 1639 aa19.76■□□□□ 0.75
PIK3C2A-205ENST00000533645 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
PIK3C2A-205ENST00000533645 TOP2BQ02880 1626 aa19.73■□□□□ 0.75
PIK3C2A-205ENST00000533645 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
PIK3C2A-205ENST00000533645 ABCA5Q8WWZ7 1642 aa19.72■□□□□ 0.75
PIK3C2A-205ENST00000533645 GRIN2BQ13224 1484 aa19.72■□□□□ 0.75
PIK3C2A-205ENST00000533645 MAGI1Q96QZ7 1491 aaPredicted RBP19.72■□□□□ 0.75
PIK3C2A-205ENST00000533645 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
PIK3C2A-205ENST00000533645 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
PIK3C2A-205ENST00000533645 ARHGEF11O15085 1522 aa19.69■□□□□ 0.74
PIK3C2A-205ENST00000533645 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.741e-6■■■■■ 58.5
PIK3C2A-205ENST00000533645 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
PIK3C2A-205ENST00000533645 FBLN2P98095 1184 aa19.66■□□□□ 0.74
PIK3C2A-205ENST00000533645 SYNJ2O15056 1496 aa19.64■□□□□ 0.73
PIK3C2A-205ENST00000533645 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
PIK3C2A-205ENST00000533645 CHMP7Q8WUX9 453 aaPredicted RBP19.57■□□□□ 0.72
PIK3C2A-205ENST00000533645 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
PIK3C2A-205ENST00000533645 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
PIK3C2A-205ENST00000533645 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
PIK3C2A-205ENST00000533645 GRIN2AQ12879 1464 aa19.48■□□□□ 0.71
PIK3C2A-205ENST00000533645 FHAD1B1AJZ9 1412 aa19.43■□□□□ 0.7
PIK3C2A-205ENST00000533645 CYB5RLQ6IPT4 315 aa19.42■□□□□ 0.7
PIK3C2A-205ENST00000533645 CEP170Q5SW79 1584 aa19.41■□□□□ 0.7
PIK3C2A-205ENST00000533645 NUP160Q12769 1436 aa19.4■□□□□ 0.7
PIK3C2A-205ENST00000533645 SHROOM2Q13796 1616 aa19.35■□□□□ 0.69
PIK3C2A-205ENST00000533645 CUL7Q14999 1698 aa19.31■□□□□ 0.68
PIK3C2A-205ENST00000533645 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
PIK3C2A-205ENST00000533645 ERCC6L2Q5T890 1561 aa19.29■□□□□ 0.68
PIK3C2A-205ENST00000533645 RUSC2Q8N2Y8 1516 aa19.27■□□□□ 0.68
PIK3C2A-205ENST00000533645 IGF1RP08069 1367 aa19.21■□□□□ 0.67
PIK3C2A-205ENST00000533645 PRG4Q92954 1404 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms