RNA–Protein interactions for RNA: ENST00000533637.5

STX3-206, Transcript of syntaxin 3, humanhuman

TSL 2

Gene STX3, Length 1,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX3-206ENST00000533637 NISCHQ9Y2I1 1504 aa39.55■■■■□ 3.92
STX3-206ENST00000533637 ABCC9O60706 1549 aa36.57■■■■□ 3.44
STX3-206ENST00000533637 CCDC180Q9P1Z9 1646 aa35.81■■■■□ 3.32
STX3-206ENST00000533637 DNAJC5BQ9UF47 199 aa34.89■■■■□ 3.18
STX3-206ENST00000533637 RB1CC1Q8TDY2 1594 aa34.48■■■■□ 3.11
STX3-206ENST00000533637 NACADO15069 1562 aa34.04■■■■□ 3.04
STX3-206ENST00000533637 PABPN1Q86U42 306 aaKnown RBP eCLIP33.94■■■■□ 3.02
STX3-206ENST00000533637 DCAF8L2P0C7V8 631 aa33.8■■■■□ 3
STX3-206ENST00000533637 UNC13AQ9UPW8 1703 aa33.65■■■□□ 2.98
STX3-206ENST00000533637 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
STX3-206ENST00000533637 MYO15BQ96JP2 1530 aa33.3■■■□□ 2.92
STX3-206ENST00000533637 CECR2Q9BXF3 1484 aa33.03■■■□□ 2.88
STX3-206ENST00000533637 CC2D2AQ9P2K1 1620 aa32.98■■■□□ 2.87
STX3-206ENST00000533637 SHROOM4Q9ULL8 1493 aa32.97■■■□□ 2.87
STX3-206ENST00000533637 EIF4G1Q04637 1599 aaKnown RBP32.72■■■□□ 2.83
STX3-206ENST00000533637 SCRIBQ14160 1630 aa32.62■■■□□ 2.81
STX3-206ENST00000533637 DNAJC5Q9H3Z4 198 aa32.62■■■□□ 2.81
STX3-206ENST00000533637 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
STX3-206ENST00000533637 DCAF1Q9Y4B6 1507 aa32.6■■■□□ 2.81
STX3-206ENST00000533637 CUX2O14529 1486 aa31.84■■■□□ 2.69
STX3-206ENST00000533637 ERCC6Q03468 1493 aa31.69■■■□□ 2.66
STX3-206ENST00000533637 NCAPD3P42695 1498 aa31.42■■■□□ 2.62
STX3-206ENST00000533637 ATAD2BQ9ULI0 1458 aa31.23■■■□□ 2.59
STX3-206ENST00000533637 NESP48681 1621 aa31.18■■■□□ 2.58
STX3-206ENST00000533637 HMGXB3Q12766 1538 aa31.14■■■□□ 2.58
STX3-206ENST00000533637 SMARCA2P51531 1590 aa31.13■■■□□ 2.57
STX3-206ENST00000533637 SMARCA4P51532 1647 aa31.02■■■□□ 2.56
STX3-206ENST00000533637 THOC2Q8NI27 1593 aaKnown RBP31■■■□□ 2.55
STX3-206ENST00000533637 TRIM41Q8WV44 630 aa30.97■■■□□ 2.55
STX3-206ENST00000533637 BAZ1BQ9UIG0 1483 aaKnown RBP30.94■■■□□ 2.54
STX3-206ENST00000533637 LAMC3Q9Y6N6 1575 aa30.86■■■□□ 2.53
STX3-206ENST00000533637 BAZ1AQ9NRL2 1556 aaPredicted RBP30.77■■■□□ 2.52
STX3-206ENST00000533637 KIF21AQ7Z4S6 1674 aa30.75■■■□□ 2.51
STX3-206ENST00000533637 PDS5BQ9NTI5 1447 aa30.73■■■□□ 2.51
STX3-206ENST00000533637 PEG3Q9GZU2 1588 aa30.68■■■□□ 2.5
STX3-206ENST00000533637 MRC2Q9UBG0 1479 aa30.5■■■□□ 2.47
STX3-206ENST00000533637 MROH2BQ7Z745 1585 aa30.45■■■□□ 2.47
STX3-206ENST00000533637 CADPSQ9ULU8 1353 aa30.45■■■□□ 2.47
STX3-206ENST00000533637 WDR62O43379 1518 aa30.42■■■□□ 2.46
STX3-206ENST00000533637 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
STX3-206ENST00000533637 CEP164Q9UPV0 1460 aa30.25■■■□□ 2.43
STX3-206ENST00000533637 FANCD2Q9BXW9 1451 aa30.12■■■□□ 2.41
STX3-206ENST00000533637 WIZO95785 1651 aa30.06■■■□□ 2.4
STX3-206ENST00000533637 CFTRP13569 1480 aa29.93■■■□□ 2.38
STX3-206ENST00000533637 RIMBP3CA6NJZ7 1639 aa29.93■■■□□ 2.38
STX3-206ENST00000533637 RIMBP3BA6NNM3 1639 aa29.93■■■□□ 2.38
STX3-206ENST00000533637 RIMBP3Q9UFD9 1639 aa29.93■■■□□ 2.38
STX3-206ENST00000533637 URB2Q14146 1524 aaKnown RBP29.9■■■□□ 2.38
STX3-206ENST00000533637 ARHGEF11O15085 1522 aa29.76■■■□□ 2.36
STX3-206ENST00000533637 IFT140Q96RY7 1462 aa29.67■■■□□ 2.34
STX3-206ENST00000533637 TOP2AP11388 1531 aaKnown RBP29.66■■■□□ 2.34
STX3-206ENST00000533637 ZNF608Q9ULD9 1512 aaPredicted RBP29.66■■■□□ 2.34
STX3-206ENST00000533637 CYB5RLQ6IPT4 315 aa29.62■■■□□ 2.33
STX3-206ENST00000533637 TRHP20396 242 aaPredicted RBP29.59■■■□□ 2.33
STX3-206ENST00000533637 PRDM2Q13029 1718 aa29.58■■■□□ 2.33
STX3-206ENST00000533637 RSF1Q96T23 1441 aaPredicted RBP29.56■■■□□ 2.32
STX3-206ENST00000533637 EIF4G3O43432 1585 aaKnown RBP29.47■■■□□ 2.31
STX3-206ENST00000533637 TOPBP1Q92547 1522 aa29.46■■■□□ 2.31
STX3-206ENST00000533637 ARAP1Q96P48 1450 aa29.42■■■□□ 2.3
STX3-206ENST00000533637 CHD1O14646 1710 aa29.39■■■□□ 2.3
STX3-206ENST00000533637 ABCC8Q09428 1581 aa29.36■■■□□ 2.29
STX3-206ENST00000533637 FBLN2P98095 1184 aa29.34■■■□□ 2.29
STX3-206ENST00000533637 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
STX3-206ENST00000533637 AQRO60306 1485 aaKnown RBP eCLIP29.3■■■□□ 2.28
STX3-206ENST00000533637 AEBP2Q6ZN18 517 aaPredicted RBP29.3■■■□□ 2.28
STX3-206ENST00000533637 DNMBPQ6XZF7 1577 aa29.29■■■□□ 2.28
STX3-206ENST00000533637 TARBP1Q13395 1621 aaKnown RBP29.22■■■□□ 2.27
STX3-206ENST00000533637 POLA1P09884 1462 aaPredicted RBP29.11■■■□□ 2.25
STX3-206ENST00000533637 TDRD9Q8NDG6 1382 aaKnown RBP29.02■■■□□ 2.24
STX3-206ENST00000533637 RAD54L2Q9Y4B4 1467 aa29.02■■■□□ 2.24
STX3-206ENST00000533637 CLASP1Q7Z460 1538 aa29.01■■■□□ 2.23
STX3-206ENST00000533637 SNAPC4Q5SXM2 1469 aa29.01■■■□□ 2.23
STX3-206ENST00000533637 CHMP7Q8WUX9 453 aaPredicted RBP28.99■■■□□ 2.23
STX3-206ENST00000533637 SYNJ1O43426 1573 aa28.99■■■□□ 2.23
STX3-206ENST00000533637 SOGA1O94964 1423 aa28.98■■■□□ 2.23
STX3-206ENST00000533637 WDR97A6NE52 1622 aa28.91■■■□□ 2.22
STX3-206ENST00000533637 MAGI1Q96QZ7 1491 aaPredicted RBP28.9■■■□□ 2.22
STX3-206ENST00000533637 FGD5Q6ZNL6 1462 aa28.84■■■□□ 2.21
STX3-206ENST00000533637 GRIN2BQ13224 1484 aa28.82■■■□□ 2.2
STX3-206ENST00000533637 SYNJ2O15056 1496 aa28.81■■■□□ 2.2
STX3-206ENST00000533637 GAPVD1Q14C86 1478 aa28.8■■■□□ 2.2
STX3-206ENST00000533637 CUX1P39880 1505 aa28.66■■■□□ 2.18
STX3-206ENST00000533637 PBRM1Q86U86 1689 aa28.64■■■□□ 2.17
STX3-206ENST00000533637 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
STX3-206ENST00000533637 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
STX3-206ENST00000533637 ABCA10Q8WWZ4 1543 aa28.45■■■□□ 2.15
STX3-206ENST00000533637 GRIN2AQ12879 1464 aa28.44■■■□□ 2.14
STX3-206ENST00000533637 CEP170Q5SW79 1584 aa28.41■■■□□ 2.14
STX3-206ENST00000533637 NUP160Q12769 1436 aa28.35■■■□□ 2.13
STX3-206ENST00000533637 KIF13AQ9H1H9 1805 aa28.34■■■□□ 2.13
STX3-206ENST00000533637 ADAMTS12P58397 1594 aa28.33■■■□□ 2.12
STX3-206ENST00000533637 SHROOM2Q13796 1616 aa28.29■■■□□ 2.12
STX3-206ENST00000533637 FHAD1B1AJZ9 1412 aa28.23■■■□□ 2.11
STX3-206ENST00000533637 WRNQ14191 1432 aaPredicted RBP eCLIP28.23■■■□□ 2.11
STX3-206ENST00000533637 FAM69CQ0P6D2 419 aa28.18■■■□□ 2.1
STX3-206ENST00000533637 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
STX3-206ENST00000533637 NPM1P06748 294 aaKnown RBP eCLIP28.13■■■□□ 2.09
STX3-206ENST00000533637 ABCC10Q5T3U5 1492 aa28.13■■■□□ 2.09
STX3-206ENST00000533637 JPH4Q96JJ6 628 aa28.09■■■□□ 2.09
STX3-206ENST00000533637 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms