RNA–Protein interactions for RNA: ENST00000533588.1

AP001189.4-201, humanhuman

TSL 3 BASIC

Gene AP001189.4, Length 452 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001189.4-201ENST00000533588 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
AP001189.4-201ENST00000533588 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
AP001189.4-201ENST00000533588 ABCC9O60706 1549 aa20.6■□□□□ 0.89
AP001189.4-201ENST00000533588 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.76
AP001189.4-201ENST00000533588 NACADO15069 1562 aa19.79■□□□□ 0.76
AP001189.4-201ENST00000533588 MYO15BQ96JP2 1530 aa19.7■□□□□ 0.74
AP001189.4-201ENST00000533588 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
AP001189.4-201ENST00000533588 ZCCHC6Q5VYS8 1495 aaKnown RBP19.53■□□□□ 0.72
AP001189.4-201ENST00000533588 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
AP001189.4-201ENST00000533588 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
AP001189.4-201ENST00000533588 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
AP001189.4-201ENST00000533588 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
AP001189.4-201ENST00000533588 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
AP001189.4-201ENST00000533588 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
AP001189.4-201ENST00000533588 SCRIBQ14160 1630 aa19■□□□□ 0.63
AP001189.4-201ENST00000533588 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
AP001189.4-201ENST00000533588 CC2D2AQ9P2K1 1620 aa18.65■□□□□ 0.58
AP001189.4-201ENST00000533588 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
AP001189.4-201ENST00000533588 NCAPD3P42695 1498 aa18.28■□□□□ 0.52
AP001189.4-201ENST00000533588 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
AP001189.4-201ENST00000533588 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
AP001189.4-201ENST00000533588 ATAD2BQ9ULI0 1458 aa18.21■□□□□ 0.51
AP001189.4-201ENST00000533588 SMARCA2P51531 1590 aa18.21■□□□□ 0.51
AP001189.4-201ENST00000533588 HMGXB3Q12766 1538 aa18.15■□□□□ 0.5
AP001189.4-201ENST00000533588 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
AP001189.4-201ENST00000533588 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
AP001189.4-201ENST00000533588 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
AP001189.4-201ENST00000533588 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
AP001189.4-201ENST00000533588 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
AP001189.4-201ENST00000533588 WIZO95785 1651 aa17.8■□□□□ 0.44
AP001189.4-201ENST00000533588 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
AP001189.4-201ENST00000533588 CUX2O14529 1486 aa17.76■□□□□ 0.43
AP001189.4-201ENST00000533588 NESP48681 1621 aa17.76■□□□□ 0.43
AP001189.4-201ENST00000533588 CADPSQ9ULU8 1353 aa17.72■□□□□ 0.43
AP001189.4-201ENST00000533588 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
AP001189.4-201ENST00000533588 TOP2AP11388 1531 aaKnown RBP17.68■□□□□ 0.42
AP001189.4-201ENST00000533588 CFTRP13569 1480 aa17.58■□□□□ 0.41
AP001189.4-201ENST00000533588 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
AP001189.4-201ENST00000533588 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.39
AP001189.4-201ENST00000533588 MRC2Q9UBG0 1479 aa17.49■□□□□ 0.39
AP001189.4-201ENST00000533588 FANCD2Q9BXW9 1451 aa17.48■□□□□ 0.39
AP001189.4-201ENST00000533588 CEP164Q9UPV0 1460 aa17.47■□□□□ 0.39
AP001189.4-201ENST00000533588 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
AP001189.4-201ENST00000533588 WDR62O43379 1518 aa17.45■□□□□ 0.38
AP001189.4-201ENST00000533588 DNAJC5Q9H3Z4 198 aa17.43■□□□□ 0.38
AP001189.4-201ENST00000533588 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
AP001189.4-201ENST00000533588 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
AP001189.4-201ENST00000533588 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
AP001189.4-201ENST00000533588 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
AP001189.4-201ENST00000533588 IFT140Q96RY7 1462 aa17.16■□□□□ 0.34
AP001189.4-201ENST00000533588 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
AP001189.4-201ENST00000533588 DNMBPQ6XZF7 1577 aa17.14■□□□□ 0.33
AP001189.4-201ENST00000533588 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
AP001189.4-201ENST00000533588 ZNF608Q9ULD9 1512 aaPredicted RBP17.01■□□□□ 0.31
AP001189.4-201ENST00000533588 OSCARQ8IYS5 282 aa17■□□□□ 0.31
AP001189.4-201ENST00000533588 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
AP001189.4-201ENST00000533588 SOGA1O94964 1423 aa16.96■□□□□ 0.3
AP001189.4-201ENST00000533588 WDR97A6NE52 1622 aa16.94■□□□□ 0.3
AP001189.4-201ENST00000533588 CUX1P39880 1505 aa16.94■□□□□ 0.3
AP001189.4-201ENST00000533588 EIF4G3O43432 1585 aaKnown RBP16.93■□□□□ 0.3
AP001189.4-201ENST00000533588 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
AP001189.4-201ENST00000533588 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.3
AP001189.4-201ENST00000533588 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.29
AP001189.4-201ENST00000533588 TDRD9Q8NDG6 1382 aaKnown RBP16.85■□□□□ 0.29
AP001189.4-201ENST00000533588 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
AP001189.4-201ENST00000533588 ABCA10Q8WWZ4 1543 aa16.8■□□□□ 0.28
AP001189.4-201ENST00000533588 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
AP001189.4-201ENST00000533588 MAGI1Q96QZ7 1491 aaPredicted RBP16.79■□□□□ 0.28
AP001189.4-201ENST00000533588 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
AP001189.4-201ENST00000533588 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
AP001189.4-201ENST00000533588 GAPVD1Q14C86 1478 aa16.75■□□□□ 0.27
AP001189.4-201ENST00000533588 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
AP001189.4-201ENST00000533588 FBLN2P98095 1184 aa16.72■□□□□ 0.27
AP001189.4-201ENST00000533588 ABCA5Q8WWZ7 1642 aa16.71■□□□□ 0.27
AP001189.4-201ENST00000533588 CHMP7Q8WUX9 453 aaPredicted RBP16.71■□□□□ 0.27
AP001189.4-201ENST00000533588 SYNJ2O15056 1496 aa16.71■□□□□ 0.27
AP001189.4-201ENST00000533588 SYNJ1O43426 1573 aa16.71■□□□□ 0.27
AP001189.4-201ENST00000533588 CHD1O14646 1710 aa16.69■□□□□ 0.26
AP001189.4-201ENST00000533588 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
AP001189.4-201ENST00000533588 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
AP001189.4-201ENST00000533588 RIMBP3CA6NJZ7 1639 aa16.63■□□□□ 0.25
AP001189.4-201ENST00000533588 RIMBP3BA6NNM3 1639 aa16.63■□□□□ 0.25
AP001189.4-201ENST00000533588 RIMBP3Q9UFD9 1639 aa16.63■□□□□ 0.25
AP001189.4-201ENST00000533588 PBRM1Q86U86 1689 aa16.63■□□□□ 0.25
AP001189.4-201ENST00000533588 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
AP001189.4-201ENST00000533588 CLASP1Q7Z460 1538 aa16.61■□□□□ 0.25
AP001189.4-201ENST00000533588 FHAD1B1AJZ9 1412 aa16.59■□□□□ 0.25
AP001189.4-201ENST00000533588 GRIN2AQ12879 1464 aa16.55■□□□□ 0.24
AP001189.4-201ENST00000533588 ADAMTS12P58397 1594 aa16.55■□□□□ 0.24
AP001189.4-201ENST00000533588 NUP160Q12769 1436 aa16.52■□□□□ 0.23
AP001189.4-201ENST00000533588 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
AP001189.4-201ENST00000533588 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
AP001189.4-201ENST00000533588 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
AP001189.4-201ENST00000533588 IGF1RP08069 1367 aa16.46■□□□□ 0.23
AP001189.4-201ENST00000533588 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
AP001189.4-201ENST00000533588 SHROOM2Q13796 1616 aa16.39■□□□□ 0.21
AP001189.4-201ENST00000533588 CUL7Q14999 1698 aa16.39■□□□□ 0.21
AP001189.4-201ENST00000533588 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
AP001189.4-201ENST00000533588 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
AP001189.4-201ENST00000533588 KIAA0586Q9BVV6 1533 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms