RNA–Protein interactions for RNA: ENST00000533568.5

PAK1-220, Transcript of p21 (RAC1) activated kinase 1, humanhuman

TSL 3

Gene PAK1, Length 762 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-220ENST00000533568 NISCHQ9Y2I1 1504 aa43.09■■■■■ 4.49
PAK1-220ENST00000533568 ABCC9O60706 1549 aa40.75■■■■■ 4.11
PAK1-220ENST00000533568 DNAJC5BQ9UF47 199 aa39.67■■■■□ 3.94
PAK1-220ENST00000533568 CCDC180Q9P1Z9 1646 aa39.22■■■■□ 3.87
PAK1-220ENST00000533568 RB1CC1Q8TDY2 1594 aa38.07■■■■□ 3.69
PAK1-220ENST00000533568 PABPN1Q86U42 306 aaKnown RBP eCLIP37.74■■■■□ 3.63
PAK1-220ENST00000533568 NACADO15069 1562 aa37.47■■■■□ 3.59
PAK1-220ENST00000533568 DNAJC5Q9H3Z4 198 aa37.45■■■■□ 3.59
PAK1-220ENST00000533568 UNC13AQ9UPW8 1703 aa37.21■■■■□ 3.55
PAK1-220ENST00000533568 BICRAQ9NZM4 1560 aa37.12■■■■□ 3.53
PAK1-220ENST00000533568 DCAF8L2P0C7V8 631 aa36.97■■■■□ 3.51
PAK1-220ENST00000533568 CECR2Q9BXF3 1484 aa36.87■■■■□ 3.49
PAK1-220ENST00000533568 CC2D2AQ9P2K1 1620 aa36.72■■■■□ 3.47
PAK1-220ENST00000533568 MYO15BQ96JP2 1530 aa36.51■■■■□ 3.44
PAK1-220ENST00000533568 SHROOM4Q9ULL8 1493 aa36.39■■■■□ 3.42
PAK1-220ENST00000533568 EIF4G1Q04637 1599 aaKnown RBP36.28■■■■□ 3.4
PAK1-220ENST00000533568 CUX2O14529 1486 aa35.71■■■■□ 3.31
PAK1-220ENST00000533568 SCRIBQ14160 1630 aa35.68■■■■□ 3.3
PAK1-220ENST00000533568 DCAF1Q9Y4B6 1507 aa35.49■■■■□ 3.27
PAK1-220ENST00000533568 ZCCHC6Q5VYS8 1495 aaKnown RBP35.4■■■■□ 3.26
PAK1-220ENST00000533568 ERCC6Q03468 1493 aa35.23■■■■□ 3.23
PAK1-220ENST00000533568 TRIM41Q8WV44 630 aa35.12■■■■□ 3.21
PAK1-220ENST00000533568 NCAPD3P42695 1498 aa34.68■■■■□ 3.14
PAK1-220ENST00000533568 NESP48681 1621 aa34.62■■■■□ 3.13
PAK1-220ENST00000533568 THOC2Q8NI27 1593 aaKnown RBP34.52■■■■□ 3.12
PAK1-220ENST00000533568 ATAD2BQ9ULI0 1458 aa34.36■■■■□ 3.09
PAK1-220ENST00000533568 HMGXB3Q12766 1538 aa34.24■■■■□ 3.07
PAK1-220ENST00000533568 SMARCA2P51531 1590 aa34.18■■■■□ 3.06
PAK1-220ENST00000533568 LAMC3Q9Y6N6 1575 aa34.06■■■■□ 3.04
PAK1-220ENST00000533568 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
PAK1-220ENST00000533568 PDS5BQ9NTI5 1447 aa33.93■■■■□ 3.02
PAK1-220ENST00000533568 SMARCA4P51532 1647 aa33.9■■■■□ 3.02
PAK1-220ENST00000533568 BAZ1BQ9UIG0 1483 aaKnown RBP33.89■■■■□ 3.02
PAK1-220ENST00000533568 BAZ1AQ9NRL2 1556 aaPredicted RBP33.87■■■■□ 3.01
PAK1-220ENST00000533568 OSCARQ8IYS5 282 aa33.85■■■■□ 3.01
PAK1-220ENST00000533568 MRC2Q9UBG0 1479 aa33.74■■■□□ 2.99
PAK1-220ENST00000533568 WDR62O43379 1518 aa33.72■■■□□ 2.99
PAK1-220ENST00000533568 PEG3Q9GZU2 1588 aa33.61■■■□□ 2.97
PAK1-220ENST00000533568 RIMBP3CA6NJZ7 1639 aa33.55■■■□□ 2.96
PAK1-220ENST00000533568 RIMBP3BA6NNM3 1639 aa33.55■■■□□ 2.96
PAK1-220ENST00000533568 RIMBP3Q9UFD9 1639 aa33.55■■■□□ 2.96
PAK1-220ENST00000533568 CADPSQ9ULU8 1353 aa33.54■■■□□ 2.96
PAK1-220ENST00000533568 AEBP2Q6ZN18 517 aaPredicted RBP33.32■■■□□ 2.92
PAK1-220ENST00000533568 ARHGEF11O15085 1522 aa33.32■■■□□ 2.92
PAK1-220ENST00000533568 CEP164Q9UPV0 1460 aa33.28■■■□□ 2.92
PAK1-220ENST00000533568 TRHP20396 242 aaPredicted RBP33.22■■■□□ 2.91
PAK1-220ENST00000533568 MROH2BQ7Z745 1585 aa33.21■■■□□ 2.91
PAK1-220ENST00000533568 CYB5RLQ6IPT4 315 aa33.17■■■□□ 2.9
PAK1-220ENST00000533568 FANCD2Q9BXW9 1451 aa33.14■■■□□ 2.9
PAK1-220ENST00000533568 URB2Q14146 1524 aaKnown RBP33■■■□□ 2.87
PAK1-220ENST00000533568 ARAP1Q96P48 1450 aa32.92■■■□□ 2.86
PAK1-220ENST00000533568 CFTRP13569 1480 aa32.86■■■□□ 2.85
PAK1-220ENST00000533568 ZNF608Q9ULD9 1512 aaPredicted RBP32.85■■■□□ 2.85
PAK1-220ENST00000533568 IFT140Q96RY7 1462 aa32.7■■■□□ 2.83
PAK1-220ENST00000533568 WIZO95785 1651 aa32.69■■■□□ 2.82
PAK1-220ENST00000533568 RSF1Q96T23 1441 aaPredicted RBP32.62■■■□□ 2.81
PAK1-220ENST00000533568 CHD1O14646 1710 aa32.52■■■□□ 2.8
PAK1-220ENST00000533568 EIF4G3O43432 1585 aaKnown RBP32.52■■■□□ 2.8
PAK1-220ENST00000533568 FBLN2P98095 1184 aa32.38■■■□□ 2.77
PAK1-220ENST00000533568 TOPBP1Q92547 1522 aa32.36■■■□□ 2.77
PAK1-220ENST00000533568 AQRO60306 1485 aaKnown RBP eCLIP32.35■■■□□ 2.77
PAK1-220ENST00000533568 PRDM2Q13029 1718 aa32.26■■■□□ 2.75
PAK1-220ENST00000533568 ILDR1Q86SU0 546 aaPredicted RBP32.22■■■□□ 2.75
PAK1-220ENST00000533568 CLASP1Q7Z460 1538 aa32.19■■■□□ 2.74
PAK1-220ENST00000533568 TARBP1Q13395 1621 aaKnown RBP32.18■■■□□ 2.74
PAK1-220ENST00000533568 TOP2AP11388 1531 aaKnown RBP32.17■■■□□ 2.74
PAK1-220ENST00000533568 ABCC8Q09428 1581 aa32.13■■■□□ 2.73
PAK1-220ENST00000533568 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
PAK1-220ENST00000533568 SYNJ1O43426 1573 aa31.97■■■□□ 2.71
PAK1-220ENST00000533568 GAPVD1Q14C86 1478 aa31.96■■■□□ 2.71
PAK1-220ENST00000533568 POLA1P09884 1462 aaPredicted RBP31.95■■■□□ 2.7
PAK1-220ENST00000533568 SNAPC4Q5SXM2 1469 aa31.95■■■□□ 2.7
PAK1-220ENST00000533568 TDRD9Q8NDG6 1382 aaKnown RBP31.92■■■□□ 2.7
PAK1-220ENST00000533568 CHMP7Q8WUX9 453 aaPredicted RBP31.9■■■□□ 2.7
PAK1-220ENST00000533568 RAD54L2Q9Y4B4 1467 aa31.87■■■□□ 2.69
PAK1-220ENST00000533568 CCDC88BA6NC98 1476 aa31.86■■■□□ 2.69
PAK1-220ENST00000533568 MAGI1Q96QZ7 1491 aaPredicted RBP31.78■■■□□ 2.68
PAK1-220ENST00000533568 SOGA1O94964 1423 aa31.75■■■□□ 2.67
PAK1-220ENST00000533568 SYNJ2O15056 1496 aa31.72■■■□□ 2.67
PAK1-220ENST00000533568 KDM4FA0A1W2PPD8 638 aa31.69■■■□□ 2.66
PAK1-220ENST00000533568 WDR97A6NE52 1622 aa31.68■■■□□ 2.66
PAK1-220ENST00000533568 GRIN2BQ13224 1484 aa31.64■■■□□ 2.66
PAK1-220ENST00000533568 ERCC6L2Q5T890 1561 aa31.61■■■□□ 2.65
PAK1-220ENST00000533568 KIF13AQ9H1H9 1805 aa31.61■■■□□ 2.65
PAK1-220ENST00000533568 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
PAK1-220ENST00000533568 CEP170Q5SW79 1584 aa31.37■■■□□ 2.61
PAK1-220ENST00000533568 PBRM1Q86U86 1689 aa31.35■■■□□ 2.61
PAK1-220ENST00000533568 FAM69CQ0P6D2 419 aa31.32■■■□□ 2.6
PAK1-220ENST00000533568 ABCC10Q5T3U5 1492 aa31.29■■■□□ 2.6
PAK1-220ENST00000533568 CUX1P39880 1505 aa31.28■■■□□ 2.6
PAK1-220ENST00000533568 GRIN2AQ12879 1464 aa31.24■■■□□ 2.59
PAK1-220ENST00000533568 NUP160Q12769 1436 aa31.23■■■□□ 2.59
PAK1-220ENST00000533568 KDM6BO15054 1643 aa31.22■■■□□ 2.59
PAK1-220ENST00000533568 SHROOM2Q13796 1616 aa31.22■■■□□ 2.59
PAK1-220ENST00000533568 ABCA5Q8WWZ7 1642 aa31.15■■■□□ 2.58
PAK1-220ENST00000533568 DIP2BQ9P265 1576 aa31.14■■■□□ 2.58
PAK1-220ENST00000533568 MAPKBP1O60336 1514 aa31.09■■■□□ 2.57
PAK1-220ENST00000533568 ABCA10Q8WWZ4 1543 aa31.08■■■□□ 2.57
PAK1-220ENST00000533568 HECW2Q9P2P5 1572 aa31.06■■■□□ 2.56
PAK1-220ENST00000533568 PRG4Q92954 1404 aaPredicted RBP31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms