RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 NISCHQ9Y2I1 1504 aa50.6■■■■■ 5.69
VPS51-211ENST00000533487 CCDC180Q9P1Z9 1646 aa45.04■■■■■ 4.8
VPS51-211ENST00000533487 ABCC9O60706 1549 aa43.59■■■■■ 4.57
VPS51-211ENST00000533487 NACADO15069 1562 aa42.27■■■■■ 4.36
VPS51-211ENST00000533487 RB1CC1Q8TDY2 1594 aa42.24■■■■■ 4.35
VPS51-211ENST00000533487 ZCCHC6Q5VYS8 1495 aaKnown RBP42.19■■■■■ 4.34
VPS51-211ENST00000533487 MYO15BQ96JP2 1530 aa42.17■■■■■ 4.34
VPS51-211ENST00000533487 DCAF1Q9Y4B6 1507 aa42.02■■■■■ 4.32
VPS51-211ENST00000533487 DCAF8L2P0C7V8 631 aa41.97■■■■■ 4.31
VPS51-211ENST00000533487 UNC13AQ9UPW8 1703 aa41.21■■■■■ 4.19
VPS51-211ENST00000533487 SCRIBQ14160 1630 aa40.87■■■■■ 4.13
VPS51-211ENST00000533487 BICRAQ9NZM4 1560 aa40.84■■■■■ 4.13
VPS51-211ENST00000533487 SHROOM4Q9ULL8 1493 aa40.69■■■■■ 4.1
VPS51-211ENST00000533487 PABPN1Q86U42 306 aaKnown RBP eCLIP40.68■■■■■ 4.1
VPS51-211ENST00000533487 EIF4G1Q04637 1599 aaKnown RBP39.77■■■■□ 3.96
VPS51-211ENST00000533487 DNAJC5BQ9UF47 199 aa39.72■■■■□ 3.95
VPS51-211ENST00000533487 CC2D2AQ9P2K1 1620 aa39.54■■■■□ 3.92
VPS51-211ENST00000533487 BAZ1AQ9NRL2 1556 aaPredicted RBP39.26■■■■□ 3.88
VPS51-211ENST00000533487 CECR2Q9BXF3 1484 aa39.25■■■■□ 3.87
VPS51-211ENST00000533487 SMARCA4P51532 1647 aa39.22■■■■□ 3.87
VPS51-211ENST00000533487 SMARCA2P51531 1590 aa39■■■■□ 3.83
VPS51-211ENST00000533487 NCAPD3P42695 1498 aa38.95■■■■□ 3.83
VPS51-211ENST00000533487 ATAD2BQ9ULI0 1458 aa38.93■■■■□ 3.82
VPS51-211ENST00000533487 PEG3Q9GZU2 1588 aa38.93■■■■□ 3.82
VPS51-211ENST00000533487 MROH2BQ7Z745 1585 aa38.91■■■■□ 3.82
VPS51-211ENST00000533487 HMGXB3Q12766 1538 aa38.82■■■■□ 3.8
VPS51-211ENST00000533487 BAZ1BQ9UIG0 1483 aaKnown RBP38.64■■■■□ 3.78
VPS51-211ENST00000533487 RSF1Q96T23 1441 aaPredicted RBP38.55■■■■□ 3.76
VPS51-211ENST00000533487 WIZO95785 1651 aa38.5■■■■□ 3.75
VPS51-211ENST00000533487 TOP2AP11388 1531 aaKnown RBP38.2■■■■□ 3.71
VPS51-211ENST00000533487 LAMC3Q9Y6N6 1575 aa37.93■■■■□ 3.66
VPS51-211ENST00000533487 CADPSQ9ULU8 1353 aa37.78■■■■□ 3.64
VPS51-211ENST00000533487 NESP48681 1621 aa37.76■■■■□ 3.63
VPS51-211ENST00000533487 CCDC88BA6NC98 1476 aa37.67■■■■□ 3.62
VPS51-211ENST00000533487 ERCC6Q03468 1493 aa37.64■■■■□ 3.62
VPS51-211ENST00000533487 PDS5BQ9NTI5 1447 aa37.64■■■■□ 3.62
VPS51-211ENST00000533487 CFTRP13569 1480 aa37.62■■■■□ 3.61
VPS51-211ENST00000533487 SUPT5HO00267 1087 aaKnown RBP37.58■■■■□ 3.61
VPS51-211ENST00000533487 PRDM2Q13029 1718 aa37.47■■■■□ 3.59
VPS51-211ENST00000533487 KIF21AQ7Z4S6 1674 aa37.44■■■■□ 3.58
VPS51-211ENST00000533487 FANCD2Q9BXW9 1451 aa37.32■■■■□ 3.56
VPS51-211ENST00000533487 CUX2O14529 1486 aa37.29■■■■□ 3.56
VPS51-211ENST00000533487 CEP164Q9UPV0 1460 aa37.29■■■■□ 3.56
VPS51-211ENST00000533487 THOC2Q8NI27 1593 aaKnown RBP37.29■■■■□ 3.56
VPS51-211ENST00000533487 MRC2Q9UBG0 1479 aa37.19■■■■□ 3.54
VPS51-211ENST00000533487 WDR62O43379 1518 aa37.09■■■■□ 3.53
VPS51-211ENST00000533487 ABCC8Q09428 1581 aa36.93■■■■□ 3.5
VPS51-211ENST00000533487 URB2Q14146 1524 aaKnown RBP36.89■■■■□ 3.5
VPS51-211ENST00000533487 DNMBPQ6XZF7 1577 aa36.78■■■■□ 3.48
VPS51-211ENST00000533487 TOPBP1Q92547 1522 aa36.75■■■■□ 3.47
VPS51-211ENST00000533487 IFT140Q96RY7 1462 aa36.52■■■■□ 3.44
VPS51-211ENST00000533487 CUX1P39880 1505 aa36.5■■■■□ 3.43
VPS51-211ENST00000533487 POLA1P09884 1462 aaPredicted RBP36.43■■■■□ 3.42
VPS51-211ENST00000533487 WRNQ14191 1432 aaPredicted RBP eCLIP36.39■■■■□ 3.42
VPS51-211ENST00000533487 FGD5Q6ZNL6 1462 aa36.37■■■■□ 3.41
VPS51-211ENST00000533487 TARBP1Q13395 1621 aaKnown RBP36.36■■■■□ 3.41
VPS51-211ENST00000533487 BIVM-ERCC5R4GMW8 1640 aa36.36■■■■□ 3.41
VPS51-211ENST00000533487 TOP2BQ02880 1626 aa36.34■■■■□ 3.41
VPS51-211ENST00000533487 SOGA1O94964 1423 aa36.29■■■■□ 3.4
VPS51-211ENST00000533487 WDR97A6NE52 1622 aa36.27■■■■□ 3.4
VPS51-211ENST00000533487 SYNJ1O43426 1573 aa36.23■■■■□ 3.39
VPS51-211ENST00000533487 ZNF608Q9ULD9 1512 aaPredicted RBP36.18■■■■□ 3.38
VPS51-211ENST00000533487 RAD54L2Q9Y4B4 1467 aa36.18■■■■□ 3.38
VPS51-211ENST00000533487 EIF4G3O43432 1585 aaKnown RBP36.16■■■■□ 3.38
VPS51-211ENST00000533487 ABCA10Q8WWZ4 1543 aa36.1■■■■□ 3.37
VPS51-211ENST00000533487 AQRO60306 1485 aaKnown RBP eCLIP36.02■■■■□ 3.363e-7■■■■□ 21.2
VPS51-211ENST00000533487 TDRD9Q8NDG6 1382 aaKnown RBP35.97■■■■□ 3.35
VPS51-211ENST00000533487 ABCA5Q8WWZ7 1642 aa35.93■■■■□ 3.34
VPS51-211ENST00000533487 GAPVD1Q14C86 1478 aa35.91■■■■□ 3.34
VPS51-211ENST00000533487 GRIN2BQ13224 1484 aa35.9■■■■□ 3.34
VPS51-211ENST00000533487 PBRM1Q86U86 1689 aa35.84■■■■□ 3.33
VPS51-211ENST00000533487 MAGI1Q96QZ7 1491 aaPredicted RBP35.83■■■■□ 3.33
VPS51-211ENST00000533487 DNAJC5Q9H3Z4 198 aa35.79■■■■□ 3.32
VPS51-211ENST00000533487 SNAPC4Q5SXM2 1469 aa35.73■■■■□ 3.31
VPS51-211ENST00000533487 ERICH3Q5RHP9 1530 aa35.72■■■■□ 3.31
VPS51-211ENST00000533487 OSCARQ8IYS5 282 aa35.7■■■■□ 3.31
VPS51-211ENST00000533487 CHD1O14646 1710 aa35.67■■■■□ 3.3
VPS51-211ENST00000533487 KIF27Q86VH2 1401 aa35.66■■■■□ 3.3
VPS51-211ENST00000533487 SYNJ2O15056 1496 aa35.65■■■■□ 3.3
VPS51-211ENST00000533487 TRIM41Q8WV44 630 aa35.62■■■■□ 3.29
VPS51-211ENST00000533487 ADAMTS12P58397 1594 aa35.55■■■■□ 3.28
VPS51-211ENST00000533487 CHMP7Q8WUX9 453 aaPredicted RBP35.55■■■■□ 3.28
VPS51-211ENST00000533487 FHAD1B1AJZ9 1412 aa35.53■■■■□ 3.28
VPS51-211ENST00000533487 FBLN2P98095 1184 aa35.51■■■■□ 3.28
VPS51-211ENST00000533487 CUL7Q14999 1698 aa35.46■■■■□ 3.27
VPS51-211ENST00000533487 GRIN2AQ12879 1464 aa35.41■■■■□ 3.26
VPS51-211ENST00000533487 IGF1RP08069 1367 aa35.41■■■■□ 3.26
VPS51-211ENST00000533487 CLASP1Q7Z460 1538 aa35.3■■■■□ 3.24
VPS51-211ENST00000533487 NUP160Q12769 1436 aa35.27■■■■□ 3.24
VPS51-211ENST00000533487 CHIC1Q5VXU3 224 aa35.25■■■■□ 3.23
VPS51-211ENST00000533487 CARMIL1Q5VZK9 1371 aa35.24■■■■□ 3.23
VPS51-211ENST00000533487 EEA1Q15075 1411 aa35.2■■■■□ 3.23
VPS51-211ENST00000533487 RUSC2Q8N2Y8 1516 aa35.19■■■■□ 3.22
VPS51-211ENST00000533487 CEP170Q5SW79 1584 aa35.17■■■■□ 3.22
VPS51-211ENST00000533487 ARHGEF11O15085 1522 aa35.1■■■■□ 3.21
VPS51-211ENST00000533487 RAPGEF2Q9Y4G8 1499 aa35.08■■■■□ 3.21
VPS51-211ENST00000533487 RIMBP3CA6NJZ7 1639 aa35.07■■■■□ 3.21
VPS51-211ENST00000533487 RIMBP3BA6NNM3 1639 aa35.07■■■■□ 3.21
VPS51-211ENST00000533487 RIMBP3Q9UFD9 1639 aa35.07■■■■□ 3.21
VPS51-211ENST00000533487 SHROOM2Q13796 1616 aa35.01■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms