RNA–Protein interactions for RNA: ENST00000533395.5

FOXRED1-215, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-215ENST00000533395 NISCHQ9Y2I1 1504 aa45.21■■■■■ 4.83
FOXRED1-215ENST00000533395 CCDC180Q9P1Z9 1646 aa40.23■■■■■ 4.03
FOXRED1-215ENST00000533395 ABCC9O60706 1549 aa39.64■■■■□ 3.94
FOXRED1-215ENST00000533395 DCAF8L2P0C7V8 631 aa38.1■■■■□ 3.69
FOXRED1-215ENST00000533395 RB1CC1Q8TDY2 1594 aa37.98■■■■□ 3.67
FOXRED1-215ENST00000533395 NACADO15069 1562 aa37.85■■■■□ 3.65
FOXRED1-215ENST00000533395 ZCCHC6Q5VYS8 1495 aaKnown RBP37.61■■■■□ 3.61
FOXRED1-215ENST00000533395 MYO15BQ96JP2 1530 aa37.46■■■■□ 3.59
FOXRED1-215ENST00000533395 DCAF1Q9Y4B6 1507 aa37.3■■■■□ 3.56
FOXRED1-215ENST00000533395 UNC13AQ9UPW8 1703 aa37.16■■■■□ 3.54
FOXRED1-215ENST00000533395 PABPN1Q86U42 306 aaKnown RBP eCLIP37.06■■■■□ 3.52
FOXRED1-215ENST00000533395 SCRIBQ14160 1630 aa36.85■■■■□ 3.49
FOXRED1-215ENST00000533395 BICRAQ9NZM4 1560 aa36.81■■■■□ 3.48
FOXRED1-215ENST00000533395 DNAJC5BQ9UF47 199 aa36.47■■■■□ 3.43
FOXRED1-215ENST00000533395 SHROOM4Q9ULL8 1493 aa36.29■■■■□ 3.4
FOXRED1-215ENST00000533395 EIF4G1Q04637 1599 aaKnown RBP35.88■■■■□ 3.33
FOXRED1-215ENST00000533395 CC2D2AQ9P2K1 1620 aa35.79■■■■□ 3.32
FOXRED1-215ENST00000533395 CECR2Q9BXF3 1484 aa35.58■■■■□ 3.29
FOXRED1-215ENST00000533395 SMARCA4P51532 1647 aa35.14■■■■□ 3.22
FOXRED1-215ENST00000533395 BAZ1AQ9NRL2 1556 aaPredicted RBP35.06■■■■□ 3.2
FOXRED1-215ENST00000533395 ATAD2BQ9ULI0 1458 aa34.96■■■■□ 3.19
FOXRED1-215ENST00000533395 SMARCA2P51531 1590 aa34.91■■■■□ 3.18
FOXRED1-215ENST00000533395 NCAPD3P42695 1498 aa34.9■■■■□ 3.18
FOXRED1-215ENST00000533395 MROH2BQ7Z745 1585 aa34.89■■■■□ 3.18
FOXRED1-215ENST00000533395 HMGXB3Q12766 1538 aa34.73■■■■□ 3.15
FOXRED1-215ENST00000533395 BAZ1BQ9UIG0 1483 aaKnown RBP34.71■■■■□ 3.15
FOXRED1-215ENST00000533395 PEG3Q9GZU2 1588 aa34.69■■■■□ 3.14
FOXRED1-215ENST00000533395 WIZO95785 1651 aa34.56■■■■□ 3.12
FOXRED1-215ENST00000533395 RSF1Q96T23 1441 aaPredicted RBP34.41■■■■□ 3.1
FOXRED1-215ENST00000533395 NESP48681 1621 aa34.26■■■■□ 3.07
FOXRED1-215ENST00000533395 ERCC6Q03468 1493 aa34.19■■■■□ 3.06
FOXRED1-215ENST00000533395 TOP2AP11388 1531 aaKnown RBP34.1■■■■□ 3.05
FOXRED1-215ENST00000533395 LAMC3Q9Y6N6 1575 aa34.05■■■■□ 3.04
FOXRED1-215ENST00000533395 CADPSQ9ULU8 1353 aa33.93■■■■□ 3.02
FOXRED1-215ENST00000533395 PDS5BQ9NTI5 1447 aa33.86■■■■□ 3.01
FOXRED1-215ENST00000533395 KIF21AQ7Z4S6 1674 aa33.84■■■■□ 3.01
FOXRED1-215ENST00000533395 CUX2O14529 1486 aa33.74■■■□□ 2.99
FOXRED1-215ENST00000533395 CCDC88BA6NC98 1476 aa33.73■■■□□ 2.99
FOXRED1-215ENST00000533395 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
FOXRED1-215ENST00000533395 CFTRP13569 1480 aa33.68■■■□□ 2.98
FOXRED1-215ENST00000533395 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
FOXRED1-215ENST00000533395 FANCD2Q9BXW9 1451 aa33.59■■■□□ 2.97
FOXRED1-215ENST00000533395 CEP164Q9UPV0 1460 aa33.56■■■□□ 2.96
FOXRED1-215ENST00000533395 MRC2Q9UBG0 1479 aa33.51■■■□□ 2.96
FOXRED1-215ENST00000533395 PRDM2Q13029 1718 aa33.46■■■□□ 2.95
FOXRED1-215ENST00000533395 WDR62O43379 1518 aa33.37■■■□□ 2.93
FOXRED1-215ENST00000533395 URB2Q14146 1524 aaKnown RBP33.25■■■□□ 2.91
FOXRED1-215ENST00000533395 TOPBP1Q92547 1522 aa33.02■■■□□ 2.88
FOXRED1-215ENST00000533395 DNMBPQ6XZF7 1577 aa32.96■■■□□ 2.87
FOXRED1-215ENST00000533395 ABCC8Q09428 1581 aa32.96■■■□□ 2.87
FOXRED1-215ENST00000533395 DNAJC5Q9H3Z4 198 aa32.91■■■□□ 2.86
FOXRED1-215ENST00000533395 IFT140Q96RY7 1462 aa32.82■■■□□ 2.84
FOXRED1-215ENST00000533395 ZNF608Q9ULD9 1512 aaPredicted RBP32.75■■■□□ 2.83
FOXRED1-215ENST00000533395 CUX1P39880 1505 aa32.73■■■□□ 2.83
FOXRED1-215ENST00000533395 POLA1P09884 1462 aaPredicted RBP32.73■■■□□ 2.83
FOXRED1-215ENST00000533395 FGD5Q6ZNL6 1462 aa32.66■■■□□ 2.82
FOXRED1-215ENST00000533395 RAD54L2Q9Y4B4 1467 aa32.65■■■□□ 2.82
FOXRED1-215ENST00000533395 TARBP1Q13395 1621 aaKnown RBP32.65■■■□□ 2.82
FOXRED1-215ENST00000533395 SOGA1O94964 1423 aa32.63■■■□□ 2.81
FOXRED1-215ENST00000533395 EIF4G3O43432 1585 aaKnown RBP32.61■■■□□ 2.81
FOXRED1-215ENST00000533395 AQRO60306 1485 aaKnown RBP eCLIP32.56■■■□□ 2.83e-6■■■□□ 16.8
FOXRED1-215ENST00000533395 TDRD9Q8NDG6 1382 aaKnown RBP32.5■■■□□ 2.79
FOXRED1-215ENST00000533395 WRNQ14191 1432 aaPredicted RBP eCLIP32.48■■■□□ 2.79
FOXRED1-215ENST00000533395 SYNJ1O43426 1573 aa32.43■■■□□ 2.78
FOXRED1-215ENST00000533395 OSCARQ8IYS5 282 aa32.41■■■□□ 2.78
FOXRED1-215ENST00000533395 TOP2BQ02880 1626 aa32.4■■■□□ 2.78
FOXRED1-215ENST00000533395 BIVM-ERCC5R4GMW8 1640 aa32.39■■■□□ 2.78
FOXRED1-215ENST00000533395 WDR97A6NE52 1622 aa32.35■■■□□ 2.77
FOXRED1-215ENST00000533395 FBLN2P98095 1184 aa32.32■■■□□ 2.76
FOXRED1-215ENST00000533395 ABCA10Q8WWZ4 1543 aa32.27■■■□□ 2.76
FOXRED1-215ENST00000533395 CHD1O14646 1710 aa32.26■■■□□ 2.75
FOXRED1-215ENST00000533395 SNAPC4Q5SXM2 1469 aa32.25■■■□□ 2.75
FOXRED1-215ENST00000533395 GRIN2BQ13224 1484 aa32.23■■■□□ 2.75
FOXRED1-215ENST00000533395 GAPVD1Q14C86 1478 aa32.23■■■□□ 2.75
FOXRED1-215ENST00000533395 PBRM1Q86U86 1689 aa32.21■■■□□ 2.75
FOXRED1-215ENST00000533395 ABCA5Q8WWZ7 1642 aa32.18■■■□□ 2.74
FOXRED1-215ENST00000533395 MAGI1Q96QZ7 1491 aaPredicted RBP32.12■■■□□ 2.73
FOXRED1-215ENST00000533395 CHMP7Q8WUX9 453 aaPredicted RBP32.12■■■□□ 2.73
FOXRED1-215ENST00000533395 SYNJ2O15056 1496 aa32.03■■■□□ 2.72
FOXRED1-215ENST00000533395 TRIM41Q8WV44 630 aa31.96■■■□□ 2.71
FOXRED1-215ENST00000533395 RIMBP3CA6NJZ7 1639 aa31.91■■■□□ 2.7
FOXRED1-215ENST00000533395 RIMBP3BA6NNM3 1639 aa31.91■■■□□ 2.7
FOXRED1-215ENST00000533395 RIMBP3Q9UFD9 1639 aa31.91■■■□□ 2.7
FOXRED1-215ENST00000533395 ADAMTS12P58397 1594 aa31.9■■■□□ 2.7
FOXRED1-215ENST00000533395 ERICH3Q5RHP9 1530 aa31.89■■■□□ 2.7
FOXRED1-215ENST00000533395 ARHGEF11O15085 1522 aa31.86■■■□□ 2.69
FOXRED1-215ENST00000533395 FHAD1B1AJZ9 1412 aa31.83■■■□□ 2.69
FOXRED1-215ENST00000533395 GRIN2AQ12879 1464 aa31.82■■■□□ 2.68
FOXRED1-215ENST00000533395 KIF27Q86VH2 1401 aa31.81■■■□□ 2.68
FOXRED1-215ENST00000533395 CLASP1Q7Z460 1538 aa31.8■■■□□ 2.68
FOXRED1-215ENST00000533395 CEP170Q5SW79 1584 aa31.68■■■□□ 2.66
FOXRED1-215ENST00000533395 IGF1RP08069 1367 aa31.68■■■□□ 2.66
FOXRED1-215ENST00000533395 CYB5RLQ6IPT4 315 aa31.66■■■□□ 2.66
FOXRED1-215ENST00000533395 NUP160Q12769 1436 aa31.63■■■□□ 2.65
FOXRED1-215ENST00000533395 CUL7Q14999 1698 aa31.6■■■□□ 2.65
FOXRED1-215ENST00000533395 ARAP1Q96P48 1450 aa31.59■■■□□ 2.65
FOXRED1-215ENST00000533395 RUSC2Q8N2Y8 1516 aa31.54■■■□□ 2.64
FOXRED1-215ENST00000533395 CARMIL1Q5VZK9 1371 aa31.52■■■□□ 2.64
FOXRED1-215ENST00000533395 ERCC6L2Q5T890 1561 aa31.45■■■□□ 2.63
FOXRED1-215ENST00000533395 SHROOM2Q13796 1616 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms