RNA–Protein interactions for RNA: ENST00000533348.5

GSDMD-213, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-213ENST00000533348 NISCHQ9Y2I1 1504 aa37.73■■■■□ 3.63
GSDMD-213ENST00000533348 CCDC180Q9P1Z9 1646 aa33.88■■■■□ 3.01
GSDMD-213ENST00000533348 ABCC9O60706 1549 aa33.62■■■□□ 2.97
GSDMD-213ENST00000533348 RB1CC1Q8TDY2 1594 aa32.14■■■□□ 2.74
GSDMD-213ENST00000533348 NACADO15069 1562 aa31.97■■■□□ 2.71
GSDMD-213ENST00000533348 DCAF8L2P0C7V8 631 aa31.7■■■□□ 2.67
GSDMD-213ENST00000533348 MYO15BQ96JP2 1530 aa31.59■■■□□ 2.65
GSDMD-213ENST00000533348 UNC13AQ9UPW8 1703 aa31.47■■■□□ 2.63
GSDMD-213ENST00000533348 DNAJC5BQ9UF47 199 aa31.41■■■□□ 2.62
GSDMD-213ENST00000533348 ZCCHC6Q5VYS8 1495 aaKnown RBP31.29■■■□□ 2.6
GSDMD-213ENST00000533348 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.6
GSDMD-213ENST00000533348 DCAF1Q9Y4B6 1507 aa31.23■■■□□ 2.59
GSDMD-213ENST00000533348 BICRAQ9NZM4 1560 aa31.19■■■□□ 2.58
GSDMD-213ENST00000533348 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.53
GSDMD-213ENST00000533348 SCRIBQ14160 1630 aa30.77■■■□□ 2.52
GSDMD-213ENST00000533348 CC2D2AQ9P2K1 1620 aa30.44■■■□□ 2.46
GSDMD-213ENST00000533348 EIF4G1Q04637 1599 aaKnown RBP30.4■■■□□ 2.46
GSDMD-213ENST00000533348 CECR2Q9BXF3 1484 aa30.3■■■□□ 2.44
GSDMD-213ENST00000533348 NCAPD3P42695 1498 aa29.48■■■□□ 2.31
GSDMD-213ENST00000533348 SMARCA4P51532 1647 aa29.42■■■□□ 2.3
GSDMD-213ENST00000533348 ATAD2BQ9ULI0 1458 aa29.39■■■□□ 2.3
GSDMD-213ENST00000533348 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
GSDMD-213ENST00000533348 BAZ1AQ9NRL2 1556 aaPredicted RBP29.3■■■□□ 2.28
GSDMD-213ENST00000533348 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
GSDMD-213ENST00000533348 PEG3Q9GZU2 1588 aa29.17■■■□□ 2.26
GSDMD-213ENST00000533348 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
GSDMD-213ENST00000533348 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
GSDMD-213ENST00000533348 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
GSDMD-213ENST00000533348 CUX2O14529 1486 aa28.98■■■□□ 2.23
GSDMD-213ENST00000533348 NESP48681 1621 aa28.92■■■□□ 2.22
GSDMD-213ENST00000533348 LAMC3Q9Y6N6 1575 aa28.83■■■□□ 2.21
GSDMD-213ENST00000533348 DNAJC5Q9H3Z4 198 aa28.8■■■□□ 2.2
GSDMD-213ENST00000533348 WIZO95785 1651 aa28.74■■■□□ 2.19
GSDMD-213ENST00000533348 THOC2Q8NI27 1593 aaKnown RBP28.66■■■□□ 2.18
GSDMD-213ENST00000533348 KIF21AQ7Z4S6 1674 aa28.64■■■□□ 2.17
GSDMD-213ENST00000533348 PDS5BQ9NTI5 1447 aa28.62■■■□□ 2.17
GSDMD-213ENST00000533348 CADPSQ9ULU8 1353 aa28.57■■■□□ 2.16
GSDMD-213ENST00000533348 RSF1Q96T23 1441 aaPredicted RBP28.5■■■□□ 2.15
GSDMD-213ENST00000533348 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
GSDMD-213ENST00000533348 MRC2Q9UBG0 1479 aa28.35■■■□□ 2.13
GSDMD-213ENST00000533348 WDR62O43379 1518 aa28.3■■■□□ 2.12
GSDMD-213ENST00000533348 CFTRP13569 1480 aa28.29■■■□□ 2.12
GSDMD-213ENST00000533348 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
GSDMD-213ENST00000533348 FANCD2Q9BXW9 1451 aa28.24■■■□□ 2.11
GSDMD-213ENST00000533348 PRDM2Q13029 1718 aa28.12■■■□□ 2.09
GSDMD-213ENST00000533348 CCDC88BA6NC98 1476 aa28.04■■■□□ 2.08
GSDMD-213ENST00000533348 URB2Q14146 1524 aaKnown RBP28■■■□□ 2.07
GSDMD-213ENST00000533348 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
GSDMD-213ENST00000533348 TOPBP1Q92547 1522 aa27.73■■■□□ 2.03
GSDMD-213ENST00000533348 IFT140Q96RY7 1462 aa27.7■■■□□ 2.03
GSDMD-213ENST00000533348 OSCARQ8IYS5 282 aa27.67■■■□□ 2.02
GSDMD-213ENST00000533348 DNMBPQ6XZF7 1577 aa27.66■■■□□ 2.02
GSDMD-213ENST00000533348 ZNF608Q9ULD9 1512 aaPredicted RBP27.61■■■□□ 2.01
GSDMD-213ENST00000533348 TRIM41Q8WV44 630 aa27.51■■□□□ 1.99
GSDMD-213ENST00000533348 TARBP1Q13395 1621 aaKnown RBP27.51■■□□□ 1.99
GSDMD-213ENST00000533348 EIF4G3O43432 1585 aaKnown RBP27.51■■□□□ 1.99
GSDMD-213ENST00000533348 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
GSDMD-213ENST00000533348 AQRO60306 1485 aaKnown RBP eCLIP27.38■■□□□ 1.97
GSDMD-213ENST00000533348 SOGA1O94964 1423 aa27.33■■□□□ 1.96
GSDMD-213ENST00000533348 RAD54L2Q9Y4B4 1467 aa27.32■■□□□ 1.96
GSDMD-213ENST00000533348 CHD1O14646 1710 aa27.31■■□□□ 1.96
GSDMD-213ENST00000533348 RIMBP3CA6NJZ7 1639 aa27.3■■□□□ 1.96
GSDMD-213ENST00000533348 RIMBP3BA6NNM3 1639 aa27.3■■□□□ 1.96
GSDMD-213ENST00000533348 RIMBP3Q9UFD9 1639 aa27.3■■□□□ 1.96
GSDMD-213ENST00000533348 FGD5Q6ZNL6 1462 aa27.29■■□□□ 1.96
GSDMD-213ENST00000533348 CUX1P39880 1505 aa27.29■■□□□ 1.96
GSDMD-213ENST00000533348 WDR97A6NE52 1622 aa27.28■■□□□ 1.96
GSDMD-213ENST00000533348 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
GSDMD-213ENST00000533348 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
GSDMD-213ENST00000533348 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
GSDMD-213ENST00000533348 FBLN2P98095 1184 aa27.14■■□□□ 1.94
GSDMD-213ENST00000533348 SNAPC4Q5SXM2 1469 aa27.11■■□□□ 1.93
GSDMD-213ENST00000533348 MAGI1Q96QZ7 1491 aaPredicted RBP27.09■■□□□ 1.93
GSDMD-213ENST00000533348 GRIN2BQ13224 1484 aa27.08■■□□□ 1.93
GSDMD-213ENST00000533348 PBRM1Q86U86 1689 aa27.04■■□□□ 1.92
GSDMD-213ENST00000533348 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
GSDMD-213ENST00000533348 GAPVD1Q14C86 1478 aa27■■□□□ 1.91
GSDMD-213ENST00000533348 CHMP7Q8WUX9 453 aaPredicted RBP27■■□□□ 1.91
GSDMD-213ENST00000533348 SYNJ2O15056 1496 aa26.99■■□□□ 1.91
GSDMD-213ENST00000533348 SYNJ1O43426 1573 aa26.98■■□□□ 1.91
GSDMD-213ENST00000533348 ABCA5Q8WWZ7 1642 aa26.98■■□□□ 1.91
GSDMD-213ENST00000533348 CLASP1Q7Z460 1538 aa26.97■■□□□ 1.91
GSDMD-213ENST00000533348 CYB5RLQ6IPT4 315 aa26.97■■□□□ 1.91
GSDMD-213ENST00000533348 BIVM-ERCC5R4GMW8 1640 aa26.95■■□□□ 1.91
GSDMD-213ENST00000533348 ARAP1Q96P48 1450 aa26.94■■□□□ 1.9
GSDMD-213ENST00000533348 TOP2BQ02880 1626 aa26.93■■□□□ 1.9
GSDMD-213ENST00000533348 WRNQ14191 1432 aaPredicted RBP eCLIP26.91■■□□□ 1.9
GSDMD-213ENST00000533348 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
GSDMD-213ENST00000533348 GRIN2AQ12879 1464 aa26.73■■□□□ 1.87
GSDMD-213ENST00000533348 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.86
GSDMD-213ENST00000533348 FHAD1B1AJZ9 1412 aa26.67■■□□□ 1.86
GSDMD-213ENST00000533348 NUP160Q12769 1436 aa26.65■■□□□ 1.86
GSDMD-213ENST00000533348 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
GSDMD-213ENST00000533348 TRHP20396 242 aaPredicted RBP26.62■■□□□ 1.85
GSDMD-213ENST00000533348 SHROOM2Q13796 1616 aa26.55■■□□□ 1.84
GSDMD-213ENST00000533348 ERCC6L2Q5T890 1561 aa26.52■■□□□ 1.84
GSDMD-213ENST00000533348 KIF27Q86VH2 1401 aa26.38■■□□□ 1.81
GSDMD-213ENST00000533348 RUSC2Q8N2Y8 1516 aa26.36■■□□□ 1.81
GSDMD-213ENST00000533348 JPH4Q96JJ6 628 aa26.36■■□□□ 1.81
GSDMD-213ENST00000533348 CUL7Q14999 1698 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms