RNA–Protein interactions for RNA: ENST00000533342.5

ANKRD42-209, Transcript of ankyrin repeat domain 42, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ANKRD42, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42-209ENST00000533342 NISCHQ9Y2I1 1504 aa26.5■■□□□ 1.83
ANKRD42-209ENST00000533342 CCDC180Q9P1Z9 1646 aa23.58■■□□□ 1.36
ANKRD42-209ENST00000533342 ABCC9O60706 1549 aa23.4■■□□□ 1.34
ANKRD42-209ENST00000533342 DCAF8L2P0C7V8 631 aa22.41■■□□□ 1.18
ANKRD42-209ENST00000533342 RB1CC1Q8TDY2 1594 aa22.29■■□□□ 1.16
ANKRD42-209ENST00000533342 NACADO15069 1562 aa22.19■■□□□ 1.14
ANKRD42-209ENST00000533342 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
ANKRD42-209ENST00000533342 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
ANKRD42-209ENST00000533342 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.09
ANKRD42-209ENST00000533342 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
ANKRD42-209ENST00000533342 DCAF1Q9Y4B6 1507 aa21.78■■□□□ 1.08
ANKRD42-209ENST00000533342 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
ANKRD42-209ENST00000533342 SCRIBQ14160 1630 aa21.68■■□□□ 1.06
ANKRD42-209ENST00000533342 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
ANKRD42-209ENST00000533342 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
ANKRD42-209ENST00000533342 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
ANKRD42-209ENST00000533342 CC2D2AQ9P2K1 1620 aa21.1■□□□□ 0.97
ANKRD42-209ENST00000533342 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
ANKRD42-209ENST00000533342 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
ANKRD42-209ENST00000533342 ATAD2BQ9ULI0 1458 aa20.53■□□□□ 0.88
ANKRD42-209ENST00000533342 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
ANKRD42-209ENST00000533342 MROH2BQ7Z745 1585 aa20.5■□□□□ 0.87
ANKRD42-209ENST00000533342 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
ANKRD42-209ENST00000533342 SMARCA2P51531 1590 aa20.45■□□□□ 0.86
ANKRD42-209ENST00000533342 BAZ1BQ9UIG0 1483 aaKnown RBP20.36■□□□□ 0.85
ANKRD42-209ENST00000533342 HMGXB3Q12766 1538 aa20.36■□□□□ 0.85
ANKRD42-209ENST00000533342 WIZO95785 1651 aa20.32■□□□□ 0.84
ANKRD42-209ENST00000533342 PEG3Q9GZU2 1588 aa20.32■□□□□ 0.84
ANKRD42-209ENST00000533342 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
ANKRD42-209ENST00000533342 NESP48681 1621 aa20.22■□□□□ 0.83
ANKRD42-209ENST00000533342 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
ANKRD42-209ENST00000533342 ERCC6Q03468 1493 aa20.12■□□□□ 0.81
ANKRD42-209ENST00000533342 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
ANKRD42-209ENST00000533342 TOP2AP11388 1531 aaKnown RBP19.98■□□□□ 0.79
ANKRD42-209ENST00000533342 LAMC3Q9Y6N6 1575 aa19.98■□□□□ 0.79
ANKRD42-209ENST00000533342 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
ANKRD42-209ENST00000533342 CADPSQ9ULU8 1353 aa19.91■□□□□ 0.78
ANKRD42-209ENST00000533342 THOC2Q8NI27 1593 aaKnown RBP19.85■□□□□ 0.77
ANKRD42-209ENST00000533342 CUX2O14529 1486 aa19.84■□□□□ 0.77
ANKRD42-209ENST00000533342 PDS5BQ9NTI5 1447 aa19.84■□□□□ 0.77
ANKRD42-209ENST00000533342 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
ANKRD42-209ENST00000533342 CFTRP13569 1480 aa19.75■□□□□ 0.75
ANKRD42-209ENST00000533342 FANCD2Q9BXW9 1451 aa19.72■□□□□ 0.75
ANKRD42-209ENST00000533342 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
ANKRD42-209ENST00000533342 CEP164Q9UPV0 1460 aa19.7■□□□□ 0.74
ANKRD42-209ENST00000533342 MRC2Q9UBG0 1479 aa19.7■□□□□ 0.74
ANKRD42-209ENST00000533342 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
ANKRD42-209ENST00000533342 WDR62O43379 1518 aa19.62■□□□□ 0.73
ANKRD42-209ENST00000533342 URB2Q14146 1524 aaKnown RBP19.57■□□□□ 0.72
ANKRD42-209ENST00000533342 DNAJC5Q9H3Z4 198 aa19.48■□□□□ 0.71
ANKRD42-209ENST00000533342 TOPBP1Q92547 1522 aa19.4■□□□□ 0.7
ANKRD42-209ENST00000533342 DNMBPQ6XZF7 1577 aa19.34■□□□□ 0.69
ANKRD42-209ENST00000533342 ZNF608Q9ULD9 1512 aaPredicted RBP19.31■□□□□ 0.68
ANKRD42-209ENST00000533342 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
ANKRD42-209ENST00000533342 IFT140Q96RY7 1462 aa19.25■□□□□ 0.67
ANKRD42-209ENST00000533342 CUX1P39880 1505 aa19.23■□□□□ 0.67
ANKRD42-209ENST00000533342 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
ANKRD42-209ENST00000533342 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
ANKRD42-209ENST00000533342 TARBP1Q13395 1621 aaKnown RBP19.2■□□□□ 0.66
ANKRD42-209ENST00000533342 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
ANKRD42-209ENST00000533342 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
ANKRD42-209ENST00000533342 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.66
ANKRD42-209ENST00000533342 SOGA1O94964 1423 aa19.14■□□□□ 0.65
ANKRD42-209ENST00000533342 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
ANKRD42-209ENST00000533342 OSCARQ8IYS5 282 aa19.06■□□□□ 0.64
ANKRD42-209ENST00000533342 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
ANKRD42-209ENST00000533342 CHD1O14646 1710 aa19.03■□□□□ 0.64
ANKRD42-209ENST00000533342 FBLN2P98095 1184 aa19.03■□□□□ 0.64
ANKRD42-209ENST00000533342 WDR97A6NE52 1622 aa19.02■□□□□ 0.63
ANKRD42-209ENST00000533342 WRNQ14191 1432 aaPredicted RBP eCLIP19.01■□□□□ 0.63
ANKRD42-209ENST00000533342 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
ANKRD42-209ENST00000533342 TOP2BQ02880 1626 aa18.97■□□□□ 0.63
ANKRD42-209ENST00000533342 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
ANKRD42-209ENST00000533342 TRIM41Q8WV44 630 aa18.96■□□□□ 0.63
ANKRD42-209ENST00000533342 PBRM1Q86U86 1689 aa18.94■□□□□ 0.62
ANKRD42-209ENST00000533342 ABCA10Q8WWZ4 1543 aa18.91■□□□□ 0.62
ANKRD42-209ENST00000533342 GAPVD1Q14C86 1478 aa18.91■□□□□ 0.62
ANKRD42-209ENST00000533342 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
ANKRD42-209ENST00000533342 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.61
ANKRD42-209ENST00000533342 CHMP7Q8WUX9 453 aaPredicted RBP18.86■□□□□ 0.61
ANKRD42-209ENST00000533342 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
ANKRD42-209ENST00000533342 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
ANKRD42-209ENST00000533342 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
ANKRD42-209ENST00000533342 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.61
ANKRD42-209ENST00000533342 SYNJ2O15056 1496 aa18.79■□□□□ 0.6
ANKRD42-209ENST00000533342 ARHGEF11O15085 1522 aa18.78■□□□□ 0.6
ANKRD42-209ENST00000533342 ADAMTS12P58397 1594 aa18.73■□□□□ 0.59
ANKRD42-209ENST00000533342 CLASP1Q7Z460 1538 aa18.72■□□□□ 0.59
ANKRD42-209ENST00000533342 CYB5RLQ6IPT4 315 aa18.69■□□□□ 0.58
ANKRD42-209ENST00000533342 GRIN2AQ12879 1464 aa18.68■□□□□ 0.58
ANKRD42-209ENST00000533342 ERICH3Q5RHP9 1530 aa18.66■□□□□ 0.58
ANKRD42-209ENST00000533342 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
ANKRD42-209ENST00000533342 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.58
ANKRD42-209ENST00000533342 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
ANKRD42-209ENST00000533342 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
ANKRD42-209ENST00000533342 ERCC6L2Q5T890 1561 aa18.58■□□□□ 0.56
ANKRD42-209ENST00000533342 NUP160Q12769 1436 aa18.56■□□□□ 0.56
ANKRD42-209ENST00000533342 IGF1RP08069 1367 aa18.56■□□□□ 0.56
ANKRD42-209ENST00000533342 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
ANKRD42-209ENST00000533342 CUL7Q14999 1698 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms