RNA–Protein interactions for RNA: ENST00000533304.1

LINC01016-205, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 4

Gene LINC01016, Length 592 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-205ENST00000533304 NISCHQ9Y2I1 1504 aa15.73■□□□□ 0.11
LINC01016-205ENST00000533304 CCDC180Q9P1Z9 1646 aa13.71□□□□□ -0.22
LINC01016-205ENST00000533304 ZCCHC6Q5VYS8 1495 aaKnown RBP13.21□□□□□ -0.3
LINC01016-205ENST00000533304 DCAF8L2P0C7V8 631 aa13.07□□□□□ -0.32
LINC01016-205ENST00000533304 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
LINC01016-205ENST00000533304 ABCC9O60706 1549 aa12.94□□□□□ -0.34
LINC01016-205ENST00000533304 SHROOM4Q9ULL8 1493 aa12.9□□□□□ -0.34
LINC01016-205ENST00000533304 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.35
LINC01016-205ENST00000533304 NACADO15069 1562 aa12.78□□□□□ -0.36
LINC01016-205ENST00000533304 RB1CC1Q8TDY2 1594 aa12.67□□□□□ -0.38
LINC01016-205ENST00000533304 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
LINC01016-205ENST00000533304 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
LINC01016-205ENST00000533304 UNC13AQ9UPW8 1703 aa12.32□□□□□ -0.44
LINC01016-205ENST00000533304 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC01016-205ENST00000533304 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
LINC01016-205ENST00000533304 BICRAQ9NZM4 1560 aa12.2□□□□□ -0.46
LINC01016-205ENST00000533304 CECR2Q9BXF3 1484 aa12.19□□□□□ -0.46
LINC01016-205ENST00000533304 BAZ1AQ9NRL2 1556 aaPredicted RBP12.17□□□□□ -0.46
LINC01016-205ENST00000533304 MROH2BQ7Z745 1585 aa12.13□□□□□ -0.47
LINC01016-205ENST00000533304 SMARCA4P51532 1647 aa12.08□□□□□ -0.48
LINC01016-205ENST00000533304 WIZO95785 1651 aa12.03□□□□□ -0.48
LINC01016-205ENST00000533304 TOP2AP11388 1531 aaKnown RBP11.95□□□□□ -0.5
LINC01016-205ENST00000533304 SMARCA2P51531 1590 aa11.92□□□□□ -0.5
LINC01016-205ENST00000533304 PEG3Q9GZU2 1588 aa11.9□□□□□ -0.5
LINC01016-205ENST00000533304 CHIC1Q5VXU3 224 aa11.89□□□□□ -0.51
LINC01016-205ENST00000533304 ATAD2BQ9ULI0 1458 aa11.88□□□□□ -0.51
LINC01016-205ENST00000533304 EIF4G1Q04637 1599 aaKnown RBP11.88□□□□□ -0.51
LINC01016-205ENST00000533304 BAZ1BQ9UIG0 1483 aaKnown RBP11.85□□□□□ -0.51
LINC01016-205ENST00000533304 CCDC88BA6NC98 1476 aa11.81□□□□□ -0.52
LINC01016-205ENST00000533304 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
LINC01016-205ENST00000533304 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
LINC01016-205ENST00000533304 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
LINC01016-205ENST00000533304 CC2D2AQ9P2K1 1620 aa11.69□□□□□ -0.54
LINC01016-205ENST00000533304 ABCC8Q09428 1581 aa11.56□□□□□ -0.56
LINC01016-205ENST00000533304 WRNQ14191 1432 aaPredicted RBP eCLIP11.53□□□□□ -0.56
LINC01016-205ENST00000533304 CFTRP13569 1480 aa11.51□□□□□ -0.57
LINC01016-205ENST00000533304 FAM9AQ8IZU1 332 aaPredicted RBP11.5□□□□□ -0.57
LINC01016-205ENST00000533304 CADPSQ9ULU8 1353 aa11.49□□□□□ -0.57
LINC01016-205ENST00000533304 PRDM2Q13029 1718 aa11.46□□□□□ -0.57
LINC01016-205ENST00000533304 SYNJ1O43426 1573 aa11.43□□□□□ -0.58
LINC01016-205ENST00000533304 LOC105371045A0A1W2PR82 267 aa11.43□□□□□ -0.58
LINC01016-205ENST00000533304 EEA1Q15075 1411 aa11.43□□□□□ -0.58
LINC01016-205ENST00000533304 TOP2BQ02880 1626 aa11.4□□□□□ -0.58
LINC01016-205ENST00000533304 BIVM-ERCC5R4GMW8 1640 aa11.38□□□□□ -0.59
LINC01016-205ENST00000533304 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
LINC01016-205ENST00000533304 FANCD2Q9BXW9 1451 aa11.37□□□□□ -0.59
LINC01016-205ENST00000533304 SOGA1O94964 1423 aa11.35□□□□□ -0.59
LINC01016-205ENST00000533304 CUX1P39880 1505 aa11.35□□□□□ -0.59
LINC01016-205ENST00000533304 NESP48681 1621 aa11.34□□□□□ -0.59
LINC01016-205ENST00000533304 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
LINC01016-205ENST00000533304 EHMT2Q96KQ7 1210 aa11.33□□□□□ -0.6
LINC01016-205ENST00000533304 PDS5BQ9NTI5 1447 aa11.33□□□□□ -0.6
LINC01016-205ENST00000533304 CEP164Q9UPV0 1460 aa11.32□□□□□ -0.6
LINC01016-205ENST00000533304 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
LINC01016-205ENST00000533304 RUSC2Q8N2Y8 1516 aa11.29□□□□□ -0.6
LINC01016-205ENST00000533304 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
LINC01016-205ENST00000533304 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
LINC01016-205ENST00000533304 GOLGA3Q08378 1498 aa11.25□□□□□ -0.61
LINC01016-205ENST00000533304 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
LINC01016-205ENST00000533304 UBTFP17480 764 aaKnown RBP11.24□□□□□ -0.61
LINC01016-205ENST00000533304 TOPBP1Q92547 1522 aa11.24□□□□□ -0.61
LINC01016-205ENST00000533304 KIF21BO75037 1637 aa11.22□□□□□ -0.61
LINC01016-205ENST00000533304 CUX2O14529 1486 aa11.21□□□□□ -0.61
LINC01016-205ENST00000533304 TNIKQ9UKE5 1360 aa11.21□□□□□ -0.61
LINC01016-205ENST00000533304 KIF21AQ7Z4S6 1674 aa11.2□□□□□ -0.62
LINC01016-205ENST00000533304 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
LINC01016-205ENST00000533304 POLA1P09884 1462 aaPredicted RBP11.18□□□□□ -0.62
LINC01016-205ENST00000533304 MRC2Q9UBG0 1479 aa11.17□□□□□ -0.62
LINC01016-205ENST00000533304 ERCC6Q03468 1493 aa11.16□□□□□ -0.62
LINC01016-205ENST00000533304 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
LINC01016-205ENST00000533304 ABCA10Q8WWZ4 1543 aa11.14□□□□□ -0.63
LINC01016-205ENST00000533304 RAD54L2Q9Y4B4 1467 aa11.14□□□□□ -0.63
LINC01016-205ENST00000533304 CEP162Q5TB80 1403 aa11.14□□□□□ -0.63
LINC01016-205ENST00000533304 PRXQ9BXM0 1461 aa11.13□□□□□ -0.63
LINC01016-205ENST00000533304 RAPGEF2Q9Y4G8 1499 aa11.13□□□□□ -0.63
LINC01016-205ENST00000533304 IGF1RP08069 1367 aa11.1□□□□□ -0.63
LINC01016-205ENST00000533304 CARMIL1Q5VZK9 1371 aa11.09□□□□□ -0.63
LINC01016-205ENST00000533304 WDR97A6NE52 1622 aa11.07□□□□□ -0.64
LINC01016-205ENST00000533304 WDR62O43379 1518 aa11.07□□□□□ -0.64
LINC01016-205ENST00000533304 CLIP1P30622 1438 aa11.07□□□□□ -0.64
LINC01016-205ENST00000533304 GAPVD1Q14C86 1478 aa11.05□□□□□ -0.64
LINC01016-205ENST00000533304 IFT140Q96RY7 1462 aa11.05□□□□□ -0.64
LINC01016-205ENST00000533304 CUL7Q14999 1698 aa11.04□□□□□ -0.64
LINC01016-205ENST00000533304 TDRD9Q8NDG6 1382 aaKnown RBP11.04□□□□□ -0.64
LINC01016-205ENST00000533304 ABCA5Q8WWZ7 1642 aa11.03□□□□□ -0.64
LINC01016-205ENST00000533304 RANGAP1P46060 587 aaPredicted RBP11.03□□□□□ -0.64
LINC01016-205ENST00000533304 TARBP1Q13395 1621 aaKnown RBP11.02□□□□□ -0.64
LINC01016-205ENST00000533304 THOC2Q8NI27 1593 aaKnown RBP11.01□□□□□ -0.65
LINC01016-205ENST00000533304 TRIM26Q12899 539 aaPredicted RBP11□□□□□ -0.65
LINC01016-205ENST00000533304 PCGF6Q9BYE7 350 aa10.99□□□□□ -0.65
LINC01016-205ENST00000533304 APLP2Q06481 763 aa10.98□□□□□ -0.65
LINC01016-205ENST00000533304 VPS8Q8N3P4 1428 aa10.97□□□□□ -0.65
LINC01016-205ENST00000533304 GRIN2BQ13224 1484 aa10.97□□□□□ -0.65
LINC01016-205ENST00000533304 PBRM1Q86U86 1689 aa10.96□□□□□ -0.65
LINC01016-205ENST00000533304 AQRO60306 1485 aaKnown RBP eCLIP10.95□□□□□ -0.66
LINC01016-205ENST00000533304 FHAD1B1AJZ9 1412 aa10.94□□□□□ -0.66
LINC01016-205ENST00000533304 ZNF608Q9ULD9 1512 aaPredicted RBP10.92□□□□□ -0.66
LINC01016-205ENST00000533304 ADAMTS12P58397 1594 aa10.91□□□□□ -0.66
LINC01016-205ENST00000533304 PPARGC1BQ86YN6 1023 aaKnown RBP10.91□□□□□ -0.66
LINC01016-205ENST00000533304 ARAP1Q96P48 1450 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms