RNA–Protein interactions for RNA: ENST00000533270.1

COMMD5-206, Transcript of COMM domain containing 5, humanhuman

TSL 3

Gene COMMD5, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-206ENST00000533270 NISCHQ9Y2I1 1504 aa54.39■■■■■ 6.3
COMMD5-206ENST00000533270 CCDC180Q9P1Z9 1646 aa48.47■■■■■ 5.35
COMMD5-206ENST00000533270 ABCC9O60706 1549 aa47.51■■■■■ 5.2
COMMD5-206ENST00000533270 RB1CC1Q8TDY2 1594 aa45.65■■■■■ 4.9
COMMD5-206ENST00000533270 NACADO15069 1562 aa45.56■■■■■ 4.88
COMMD5-206ENST00000533270 DCAF8L2P0C7V8 631 aa45.35■■■■■ 4.85
COMMD5-206ENST00000533270 ZCCHC6Q5VYS8 1495 aaKnown RBP45.31■■■■■ 4.84
COMMD5-206ENST00000533270 MYO15BQ96JP2 1530 aa45.26■■■■■ 4.84
COMMD5-206ENST00000533270 DCAF1Q9Y4B6 1507 aa45.01■■■■■ 4.8
COMMD5-206ENST00000533270 UNC13AQ9UPW8 1703 aa44.72■■■■■ 4.75
COMMD5-206ENST00000533270 BICRAQ9NZM4 1560 aa44.35■■■■■ 4.69
COMMD5-206ENST00000533270 PABPN1Q86U42 306 aaKnown RBP eCLIP44.33■■■■■ 4.69
COMMD5-206ENST00000533270 SCRIBQ14160 1630 aa44.18■■■■■ 4.66
COMMD5-206ENST00000533270 SHROOM4Q9ULL8 1493 aa43.81■■■■■ 4.6
COMMD5-206ENST00000533270 DNAJC5BQ9UF47 199 aa43.77■■■■■ 4.6
COMMD5-206ENST00000533270 EIF4G1Q04637 1599 aaKnown RBP43.15■■■■■ 4.5
COMMD5-206ENST00000533270 CC2D2AQ9P2K1 1620 aa43■■■■■ 4.47
COMMD5-206ENST00000533270 CECR2Q9BXF3 1484 aa42.7■■■■■ 4.43
COMMD5-206ENST00000533270 SMARCA4P51532 1647 aa42.27■■■■■ 4.36
COMMD5-206ENST00000533270 BAZ1AQ9NRL2 1556 aaPredicted RBP42.16■■■■■ 4.34
COMMD5-206ENST00000533270 NCAPD3P42695 1498 aa42.04■■■■■ 4.32
COMMD5-206ENST00000533270 ATAD2BQ9ULI0 1458 aa42.04■■■■■ 4.32
COMMD5-206ENST00000533270 SMARCA2P51531 1590 aa41.97■■■■■ 4.31
COMMD5-206ENST00000533270 MROH2BQ7Z745 1585 aa41.93■■■■■ 4.3
COMMD5-206ENST00000533270 PEG3Q9GZU2 1588 aa41.87■■■■■ 4.29
COMMD5-206ENST00000533270 HMGXB3Q12766 1538 aa41.85■■■■■ 4.29
COMMD5-206ENST00000533270 BAZ1BQ9UIG0 1483 aaKnown RBP41.66■■■■■ 4.26
COMMD5-206ENST00000533270 WIZO95785 1651 aa41.49■■■■■ 4.23
COMMD5-206ENST00000533270 RSF1Q96T23 1441 aaPredicted RBP41.37■■■■■ 4.21
COMMD5-206ENST00000533270 NESP48681 1621 aa41.11■■■■■ 4.17
COMMD5-206ENST00000533270 TOP2AP11388 1531 aaKnown RBP41.03■■■■■ 4.16
COMMD5-206ENST00000533270 LAMC3Q9Y6N6 1575 aa40.97■■■■■ 4.15
COMMD5-206ENST00000533270 ERCC6Q03468 1493 aa40.92■■■■■ 4.14
COMMD5-206ENST00000533270 CADPSQ9ULU8 1353 aa40.78■■■■■ 4.12
COMMD5-206ENST00000533270 KIF21AQ7Z4S6 1674 aa40.66■■■■■ 4.1
COMMD5-206ENST00000533270 PDS5BQ9NTI5 1447 aa40.64■■■■■ 4.1
COMMD5-206ENST00000533270 CUX2O14529 1486 aa40.59■■■■■ 4.09
COMMD5-206ENST00000533270 THOC2Q8NI27 1593 aaKnown RBP40.56■■■■■ 4.08
COMMD5-206ENST00000533270 CFTRP13569 1480 aa40.54■■■■■ 4.08
COMMD5-206ENST00000533270 CCDC88BA6NC98 1476 aa40.51■■■■■ 4.08
COMMD5-206ENST00000533270 FANCD2Q9BXW9 1451 aa40.32■■■■■ 4.05
COMMD5-206ENST00000533270 PRDM2Q13029 1718 aa40.29■■■■■ 4.04
COMMD5-206ENST00000533270 CEP164Q9UPV0 1460 aa40.29■■■■■ 4.04
COMMD5-206ENST00000533270 MRC2Q9UBG0 1479 aa40.28■■■■■ 4.04
COMMD5-206ENST00000533270 WDR62O43379 1518 aa40.18■■■■■ 4.02
COMMD5-206ENST00000533270 SUPT5HO00267 1087 aaKnown RBP40.11■■■■■ 4.01
COMMD5-206ENST00000533270 URB2Q14146 1524 aaKnown RBP39.97■■■■□ 3.99
COMMD5-206ENST00000533270 TOPBP1Q92547 1522 aa39.69■■■■□ 3.94
COMMD5-206ENST00000533270 DNMBPQ6XZF7 1577 aa39.63■■■■□ 3.94
COMMD5-206ENST00000533270 ABCC8Q09428 1581 aa39.63■■■■□ 3.93
COMMD5-206ENST00000533270 DNAJC5Q9H3Z4 198 aa39.5■■■■□ 3.91
COMMD5-206ENST00000533270 IFT140Q96RY7 1462 aa39.45■■■■□ 3.91
COMMD5-206ENST00000533270 POLA1P09884 1462 aaPredicted RBP39.35■■■■□ 3.89
COMMD5-206ENST00000533270 CUX1P39880 1505 aa39.35■■■■□ 3.89
COMMD5-206ENST00000533270 ZNF608Q9ULD9 1512 aaPredicted RBP39.32■■■■□ 3.89
COMMD5-206ENST00000533270 TARBP1Q13395 1621 aaKnown RBP39.31■■■■□ 3.88
COMMD5-206ENST00000533270 FGD5Q6ZNL6 1462 aa39.23■■■■□ 3.87
COMMD5-206ENST00000533270 EIF4G3O43432 1585 aaKnown RBP39.18■■■■□ 3.86
COMMD5-206ENST00000533270 RAD54L2Q9Y4B4 1467 aa39.17■■■■□ 3.86
COMMD5-206ENST00000533270 SOGA1O94964 1423 aa39.13■■■■□ 3.85
COMMD5-206ENST00000533270 AQRO60306 1485 aaKnown RBP eCLIP39.05■■■■□ 3.84
COMMD5-206ENST00000533270 WRNQ14191 1432 aaPredicted RBP eCLIP38.99■■■■□ 3.83
COMMD5-206ENST00000533270 WDR97A6NE52 1622 aa38.99■■■■□ 3.83
COMMD5-206ENST00000533270 BIVM-ERCC5R4GMW8 1640 aa38.99■■■■□ 3.83
COMMD5-206ENST00000533270 TOP2BQ02880 1626 aa38.97■■■■□ 3.83
COMMD5-206ENST00000533270 SYNJ1O43426 1573 aa38.96■■■■□ 3.83
COMMD5-206ENST00000533270 TDRD9Q8NDG6 1382 aaKnown RBP38.94■■■■□ 3.82
COMMD5-206ENST00000533270 ABCA10Q8WWZ4 1543 aa38.84■■■■□ 3.81
COMMD5-206ENST00000533270 OSCARQ8IYS5 282 aa38.81■■■■□ 3.8
COMMD5-206ENST00000533270 CHD1O14646 1710 aa38.74■■■■□ 3.79
COMMD5-206ENST00000533270 ABCA5Q8WWZ7 1642 aa38.74■■■■□ 3.79
COMMD5-206ENST00000533270 GRIN2BQ13224 1484 aa38.71■■■■□ 3.79
COMMD5-206ENST00000533270 SNAPC4Q5SXM2 1469 aa38.7■■■■□ 3.79
COMMD5-206ENST00000533270 PBRM1Q86U86 1689 aa38.69■■■■□ 3.78
COMMD5-206ENST00000533270 GAPVD1Q14C86 1478 aa38.69■■■■□ 3.78
COMMD5-206ENST00000533270 MAGI1Q96QZ7 1491 aaPredicted RBP38.64■■■■□ 3.78
COMMD5-206ENST00000533270 FBLN2P98095 1184 aa38.52■■■■□ 3.76
COMMD5-206ENST00000533270 SYNJ2O15056 1496 aa38.49■■■■□ 3.75
COMMD5-206ENST00000533270 CHMP7Q8WUX9 453 aaPredicted RBP38.4■■■■□ 3.74
COMMD5-206ENST00000533270 ADAMTS12P58397 1594 aa38.37■■■■□ 3.73
COMMD5-206ENST00000533270 ERICH3Q5RHP9 1530 aa38.36■■■■□ 3.73
COMMD5-206ENST00000533270 RIMBP3CA6NJZ7 1639 aa38.32■■■■□ 3.73
COMMD5-206ENST00000533270 RIMBP3BA6NNM3 1639 aa38.32■■■■□ 3.73
COMMD5-206ENST00000533270 RIMBP3Q9UFD9 1639 aa38.32■■■■□ 3.73
COMMD5-206ENST00000533270 CLASP1Q7Z460 1538 aa38.31■■■■□ 3.72
COMMD5-206ENST00000533270 ARHGEF11O15085 1522 aa38.28■■■■□ 3.72
COMMD5-206ENST00000533270 FHAD1B1AJZ9 1412 aa38.24■■■■□ 3.71
COMMD5-206ENST00000533270 GRIN2AQ12879 1464 aa38.23■■■■□ 3.71
COMMD5-206ENST00000533270 KIF27Q86VH2 1401 aa38.16■■■■□ 3.7
COMMD5-206ENST00000533270 CEP170Q5SW79 1584 aa38.1■■■■□ 3.69
COMMD5-206ENST00000533270 NUP160Q12769 1436 aa38.08■■■■□ 3.69
COMMD5-206ENST00000533270 TRIM41Q8WV44 630 aa38.08■■■■□ 3.69
COMMD5-206ENST00000533270 IGF1RP08069 1367 aa38.05■■■■□ 3.68
COMMD5-206ENST00000533270 CUL7Q14999 1698 aa38■■■■□ 3.67
COMMD5-206ENST00000533270 ARAP1Q96P48 1450 aa37.97■■■■□ 3.67
COMMD5-206ENST00000533270 SHROOM2Q13796 1616 aa37.86■■■■□ 3.65
COMMD5-206ENST00000533270 RUSC2Q8N2Y8 1516 aa37.84■■■■□ 3.65
COMMD5-206ENST00000533270 CYB5RLQ6IPT4 315 aa37.84■■■■□ 3.65
COMMD5-206ENST00000533270 CARMIL1Q5VZK9 1371 aa37.8■■■■□ 3.64
COMMD5-206ENST00000533270 ERCC6L2Q5T890 1561 aa37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms