RNA–Protein interactions for RNA: ENST00000533226.2

NCAM1-216, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 2

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-216ENST00000533226 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
NCAM1-216ENST00000533226 ABCC9O60706 1549 aa27.09■■□□□ 1.93
NCAM1-216ENST00000533226 CCDC180Q9P1Z9 1646 aa26.79■■□□□ 1.88
NCAM1-216ENST00000533226 DNAJC5BQ9UF47 199 aa25.65■■□□□ 1.7
NCAM1-216ENST00000533226 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.69
NCAM1-216ENST00000533226 NACADO15069 1562 aa25.38■■□□□ 1.65
NCAM1-216ENST00000533226 DCAF8L2P0C7V8 631 aa25.22■■□□□ 1.63
NCAM1-216ENST00000533226 PABPN1Q86U42 306 aaKnown RBP eCLIP25.17■■□□□ 1.62
NCAM1-216ENST00000533226 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
NCAM1-216ENST00000533226 MYO15BQ96JP2 1530 aa24.92■■□□□ 1.58
NCAM1-216ENST00000533226 BICRAQ9NZM4 1560 aa24.92■■□□□ 1.58
NCAM1-216ENST00000533226 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
NCAM1-216ENST00000533226 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
NCAM1-216ENST00000533226 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
NCAM1-216ENST00000533226 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
NCAM1-216ENST00000533226 CECR2Q9BXF3 1484 aa24.42■■□□□ 1.5
NCAM1-216ENST00000533226 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
NCAM1-216ENST00000533226 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
NCAM1-216ENST00000533226 DNAJC5Q9H3Z4 198 aa23.74■■□□□ 1.39
NCAM1-216ENST00000533226 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
NCAM1-216ENST00000533226 CUX2O14529 1486 aa23.43■■□□□ 1.34
NCAM1-216ENST00000533226 ERCC6Q03468 1493 aa23.4■■□□□ 1.34
NCAM1-216ENST00000533226 ATAD2BQ9ULI0 1458 aa23.33■■□□□ 1.33
NCAM1-216ENST00000533226 SMARCA2P51531 1590 aa23.25■■□□□ 1.31
NCAM1-216ENST00000533226 SMARCA4P51532 1647 aa23.25■■□□□ 1.31
NCAM1-216ENST00000533226 HMGXB3Q12766 1538 aa23.24■■□□□ 1.31
NCAM1-216ENST00000533226 NESP48681 1621 aa23.19■■□□□ 1.3
NCAM1-216ENST00000533226 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
NCAM1-216ENST00000533226 BAZ1AQ9NRL2 1556 aaPredicted RBP23.08■■□□□ 1.29
NCAM1-216ENST00000533226 THOC2Q8NI27 1593 aaKnown RBP23.01■■□□□ 1.27
NCAM1-216ENST00000533226 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
NCAM1-216ENST00000533226 LAMC3Q9Y6N6 1575 aa22.96■■□□□ 1.27
NCAM1-216ENST00000533226 MROH2BQ7Z745 1585 aa22.9■■□□□ 1.26
NCAM1-216ENST00000533226 KIF21AQ7Z4S6 1674 aa22.88■■□□□ 1.25
NCAM1-216ENST00000533226 PDS5BQ9NTI5 1447 aa22.83■■□□□ 1.25
NCAM1-216ENST00000533226 CADPSQ9ULU8 1353 aa22.71■■□□□ 1.23
NCAM1-216ENST00000533226 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
NCAM1-216ENST00000533226 WIZO95785 1651 aa22.62■■□□□ 1.21
NCAM1-216ENST00000533226 TRIM41Q8WV44 630 aa22.62■■□□□ 1.21
NCAM1-216ENST00000533226 WDR62O43379 1518 aa22.62■■□□□ 1.21
NCAM1-216ENST00000533226 CEP164Q9UPV0 1460 aa22.52■■□□□ 1.2
NCAM1-216ENST00000533226 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
NCAM1-216ENST00000533226 CFTRP13569 1480 aa22.4■■□□□ 1.18
NCAM1-216ENST00000533226 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
NCAM1-216ENST00000533226 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
NCAM1-216ENST00000533226 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
NCAM1-216ENST00000533226 URB2Q14146 1524 aaKnown RBP22.31■■□□□ 1.16
NCAM1-216ENST00000533226 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
NCAM1-216ENST00000533226 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.13
NCAM1-216ENST00000533226 RIMBP3CA6NJZ7 1639 aa22.08■■□□□ 1.13
NCAM1-216ENST00000533226 RIMBP3BA6NNM3 1639 aa22.08■■□□□ 1.13
NCAM1-216ENST00000533226 RIMBP3Q9UFD9 1639 aa22.08■■□□□ 1.13
NCAM1-216ENST00000533226 IFT140Q96RY7 1462 aa22.07■■□□□ 1.12
NCAM1-216ENST00000533226 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
NCAM1-216ENST00000533226 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
NCAM1-216ENST00000533226 ARHGEF11O15085 1522 aa21.97■■□□□ 1.11
NCAM1-216ENST00000533226 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.11
NCAM1-216ENST00000533226 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
NCAM1-216ENST00000533226 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
NCAM1-216ENST00000533226 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
NCAM1-216ENST00000533226 AQRO60306 1485 aaKnown RBP eCLIP21.84■■□□□ 1.09
NCAM1-216ENST00000533226 CHD1O14646 1710 aa21.84■■□□□ 1.09
NCAM1-216ENST00000533226 CYB5RLQ6IPT4 315 aa21.84■■□□□ 1.09
NCAM1-216ENST00000533226 POLA1P09884 1462 aaPredicted RBP21.77■■□□□ 1.08
NCAM1-216ENST00000533226 FBLN2P98095 1184 aa21.77■■□□□ 1.08
NCAM1-216ENST00000533226 ARAP1Q96P48 1450 aa21.75■■□□□ 1.07
NCAM1-216ENST00000533226 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
NCAM1-216ENST00000533226 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
NCAM1-216ENST00000533226 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
NCAM1-216ENST00000533226 SOGA1O94964 1423 aa21.66■■□□□ 1.06
NCAM1-216ENST00000533226 SNAPC4Q5SXM2 1469 aa21.62■■□□□ 1.05
NCAM1-216ENST00000533226 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
NCAM1-216ENST00000533226 CLASP1Q7Z460 1538 aa21.57■■□□□ 1.04
NCAM1-216ENST00000533226 WDR97A6NE52 1622 aa21.57■■□□□ 1.04
NCAM1-216ENST00000533226 CHMP7Q8WUX9 453 aaPredicted RBP21.54■■□□□ 1.04
NCAM1-216ENST00000533226 CUX1P39880 1505 aa21.54■■□□□ 1.04
NCAM1-216ENST00000533226 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
NCAM1-216ENST00000533226 MAGI1Q96QZ7 1491 aaPredicted RBP21.53■■□□□ 1.04
NCAM1-216ENST00000533226 GRIN2BQ13224 1484 aa21.51■■□□□ 1.03
NCAM1-216ENST00000533226 SYNJ2O15056 1496 aa21.47■■□□□ 1.03
NCAM1-216ENST00000533226 PBRM1Q86U86 1689 aa21.41■■□□□ 1.02
NCAM1-216ENST00000533226 GAPVD1Q14C86 1478 aa21.39■■□□□ 1.02
NCAM1-216ENST00000533226 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1.01
NCAM1-216ENST00000533226 ABCA10Q8WWZ4 1543 aa21.32■■□□□ 1
NCAM1-216ENST00000533226 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
NCAM1-216ENST00000533226 ERCC6L2Q5T890 1561 aa21.24■□□□□ 0.99
NCAM1-216ENST00000533226 GRIN2AQ12879 1464 aa21.24■□□□□ 0.99
NCAM1-216ENST00000533226 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
NCAM1-216ENST00000533226 WRNQ14191 1432 aaPredicted RBP eCLIP21.19■□□□□ 0.98
NCAM1-216ENST00000533226 CEP170Q5SW79 1584 aa21.19■□□□□ 0.98
NCAM1-216ENST00000533226 NUP160Q12769 1436 aa21.16■□□□□ 0.98
NCAM1-216ENST00000533226 SUPT5HO00267 1087 aaKnown RBP21.14■□□□□ 0.97
NCAM1-216ENST00000533226 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
NCAM1-216ENST00000533226 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
NCAM1-216ENST00000533226 SHROOM2Q13796 1616 aa21.11■□□□□ 0.97
NCAM1-216ENST00000533226 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
NCAM1-216ENST00000533226 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
NCAM1-216ENST00000533226 PRG4Q92954 1404 aaPredicted RBP21■□□□□ 0.95
NCAM1-216ENST00000533226 KIF13AQ9H1H9 1805 aa20.99■□□□□ 0.95
NCAM1-216ENST00000533226 JPH4Q96JJ6 628 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms