RNA–Protein interactions for RNA: ENST00000533168.1

CTSF-209, Transcript of cathepsin F, humanhuman

TSL 2

Gene CTSF, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-209ENST00000533168 NISCHQ9Y2I1 1504 aa33.27■■■□□ 2.92
CTSF-209ENST00000533168 ABCC9O60706 1549 aa30.34■■■□□ 2.45
CTSF-209ENST00000533168 CCDC180Q9P1Z9 1646 aa29.95■■■□□ 2.38
CTSF-209ENST00000533168 DNAJC5BQ9UF47 199 aa28.84■■■□□ 2.21
CTSF-209ENST00000533168 RB1CC1Q8TDY2 1594 aa28.67■■■□□ 2.18
CTSF-209ENST00000533168 NACADO15069 1562 aa28.38■■■□□ 2.13
CTSF-209ENST00000533168 DCAF8L2P0C7V8 631 aa28.26■■■□□ 2.11
CTSF-209ENST00000533168 PABPN1Q86U42 306 aaKnown RBP eCLIP28.24■■■□□ 2.11
CTSF-209ENST00000533168 UNC13AQ9UPW8 1703 aa28.13■■■□□ 2.09
CTSF-209ENST00000533168 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
CTSF-209ENST00000533168 MYO15BQ96JP2 1530 aa27.86■■■□□ 2.05
CTSF-209ENST00000533168 ZCCHC6Q5VYS8 1495 aaKnown RBP27.49■■□□□ 1.99
CTSF-209ENST00000533168 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
CTSF-209ENST00000533168 CC2D2AQ9P2K1 1620 aa27.38■■□□□ 1.97
CTSF-209ENST00000533168 SHROOM4Q9ULL8 1493 aa27.36■■□□□ 1.97
CTSF-209ENST00000533168 SCRIBQ14160 1630 aa27.34■■□□□ 1.97
CTSF-209ENST00000533168 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
CTSF-209ENST00000533168 EIF4G1Q04637 1599 aaKnown RBP27.23■■□□□ 1.95
CTSF-209ENST00000533168 DNAJC5Q9H3Z4 198 aa26.63■■□□□ 1.85
CTSF-209ENST00000533168 NCAPD3P42695 1498 aa26.23■■□□□ 1.79
CTSF-209ENST00000533168 CUX2O14529 1486 aa26.2■■□□□ 1.78
CTSF-209ENST00000533168 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
CTSF-209ENST00000533168 ATAD2BQ9ULI0 1458 aa26.13■■□□□ 1.77
CTSF-209ENST00000533168 SMARCA4P51532 1647 aa26.02■■□□□ 1.76
CTSF-209ENST00000533168 NESP48681 1621 aa26.01■■□□□ 1.75
CTSF-209ENST00000533168 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
CTSF-209ENST00000533168 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
CTSF-209ENST00000533168 BAZ1BQ9UIG0 1483 aaKnown RBP25.83■■□□□ 1.73
CTSF-209ENST00000533168 BAZ1AQ9NRL2 1556 aaPredicted RBP25.81■■□□□ 1.72
CTSF-209ENST00000533168 THOC2Q8NI27 1593 aaKnown RBP25.76■■□□□ 1.71
CTSF-209ENST00000533168 PEG3Q9GZU2 1588 aa25.75■■□□□ 1.71
CTSF-209ENST00000533168 LAMC3Q9Y6N6 1575 aa25.68■■□□□ 1.7
CTSF-209ENST00000533168 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
CTSF-209ENST00000533168 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.7
CTSF-209ENST00000533168 PDS5BQ9NTI5 1447 aa25.53■■□□□ 1.68
CTSF-209ENST00000533168 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
CTSF-209ENST00000533168 WIZO95785 1651 aa25.36■■□□□ 1.65
CTSF-209ENST00000533168 MRC2Q9UBG0 1479 aa25.35■■□□□ 1.65
CTSF-209ENST00000533168 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
CTSF-209ENST00000533168 WDR62O43379 1518 aa25.31■■□□□ 1.64
CTSF-209ENST00000533168 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
CTSF-209ENST00000533168 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
CTSF-209ENST00000533168 CFTRP13569 1480 aa25.08■■□□□ 1.6
CTSF-209ENST00000533168 RSF1Q96T23 1441 aaPredicted RBP25.01■■□□□ 1.59
CTSF-209ENST00000533168 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
CTSF-209ENST00000533168 OSCARQ8IYS5 282 aa24.99■■□□□ 1.59
CTSF-209ENST00000533168 TOP2AP11388 1531 aaKnown RBP24.95■■□□□ 1.58
CTSF-209ENST00000533168 PRDM2Q13029 1718 aa24.79■■□□□ 1.56
CTSF-209ENST00000533168 ZNF608Q9ULD9 1512 aaPredicted RBP24.76■■□□□ 1.55
CTSF-209ENST00000533168 RIMBP3CA6NJZ7 1639 aa24.74■■□□□ 1.55
CTSF-209ENST00000533168 RIMBP3BA6NNM3 1639 aa24.74■■□□□ 1.55
CTSF-209ENST00000533168 RIMBP3Q9UFD9 1639 aa24.74■■□□□ 1.55
CTSF-209ENST00000533168 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
CTSF-209ENST00000533168 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
CTSF-209ENST00000533168 TOPBP1Q92547 1522 aa24.64■■□□□ 1.53
CTSF-209ENST00000533168 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
CTSF-209ENST00000533168 EIF4G3O43432 1585 aaKnown RBP24.56■■□□□ 1.52
CTSF-209ENST00000533168 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
CTSF-209ENST00000533168 AQRO60306 1485 aaKnown RBP eCLIP24.49■■□□□ 1.51
CTSF-209ENST00000533168 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
CTSF-209ENST00000533168 CHD1O14646 1710 aa24.47■■□□□ 1.51
CTSF-209ENST00000533168 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
CTSF-209ENST00000533168 CYB5RLQ6IPT4 315 aa24.47■■□□□ 1.51
CTSF-209ENST00000533168 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
CTSF-209ENST00000533168 FBLN2P98095 1184 aa24.37■■□□□ 1.49
CTSF-209ENST00000533168 ARAP1Q96P48 1450 aa24.36■■□□□ 1.49
CTSF-209ENST00000533168 RAD54L2Q9Y4B4 1467 aa24.33■■□□□ 1.49
CTSF-209ENST00000533168 TRHP20396 242 aaPredicted RBP24.29■■□□□ 1.48
CTSF-209ENST00000533168 TDRD9Q8NDG6 1382 aaKnown RBP24.29■■□□□ 1.48
CTSF-209ENST00000533168 SOGA1O94964 1423 aa24.25■■□□□ 1.47
CTSF-209ENST00000533168 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
CTSF-209ENST00000533168 FGD5Q6ZNL6 1462 aa24.18■■□□□ 1.46
CTSF-209ENST00000533168 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
CTSF-209ENST00000533168 CUX1P39880 1505 aa24.13■■□□□ 1.45
CTSF-209ENST00000533168 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
CTSF-209ENST00000533168 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
CTSF-209ENST00000533168 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
CTSF-209ENST00000533168 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
CTSF-209ENST00000533168 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
CTSF-209ENST00000533168 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
CTSF-209ENST00000533168 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
CTSF-209ENST00000533168 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
CTSF-209ENST00000533168 ABCA5Q8WWZ7 1642 aa23.87■■□□□ 1.41
CTSF-209ENST00000533168 ABCA10Q8WWZ4 1543 aa23.86■■□□□ 1.41
CTSF-209ENST00000533168 ERCC6L2Q5T890 1561 aa23.82■■□□□ 1.4
CTSF-209ENST00000533168 AEBP2Q6ZN18 517 aaPredicted RBP23.77■■□□□ 1.4
CTSF-209ENST00000533168 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
CTSF-209ENST00000533168 CEP170Q5SW79 1584 aa23.73■■□□□ 1.39
CTSF-209ENST00000533168 ADAMTS12P58397 1594 aa23.7■■□□□ 1.38
CTSF-209ENST00000533168 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
CTSF-209ENST00000533168 NUP160Q12769 1436 aa23.68■■□□□ 1.38
CTSF-209ENST00000533168 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
CTSF-209ENST00000533168 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
CTSF-209ENST00000533168 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
CTSF-209ENST00000533168 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
CTSF-209ENST00000533168 FHAD1B1AJZ9 1412 aa23.6■■□□□ 1.37
CTSF-209ENST00000533168 KIF13AQ9H1H9 1805 aa23.54■■□□□ 1.36
CTSF-209ENST00000533168 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
CTSF-209ENST00000533168 PRG4Q92954 1404 aaPredicted RBP23.5■■□□□ 1.35
CTSF-209ENST00000533168 JPH4Q96JJ6 628 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms