RNA–Protein interactions for RNA: ENST00000533116.1

AMPD3-217, Transcript of adenosine monophosphate deaminase 3, humanhuman

TSL 3

Gene AMPD3, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPD3-217ENST00000533116 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
AMPD3-217ENST00000533116 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
AMPD3-217ENST00000533116 ABCC9O60706 1549 aa27.88■■■□□ 2.05
AMPD3-217ENST00000533116 RB1CC1Q8TDY2 1594 aa26.74■■□□□ 1.87
AMPD3-217ENST00000533116 NACADO15069 1562 aa26.61■■□□□ 1.85
AMPD3-217ENST00000533116 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
AMPD3-217ENST00000533116 MYO15BQ96JP2 1530 aa26.31■■□□□ 1.8
AMPD3-217ENST00000533116 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
AMPD3-217ENST00000533116 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
AMPD3-217ENST00000533116 UNC13AQ9UPW8 1703 aa26.04■■□□□ 1.76
AMPD3-217ENST00000533116 PABPN1Q86U42 306 aaKnown RBP eCLIP25.97■■□□□ 1.75
AMPD3-217ENST00000533116 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
AMPD3-217ENST00000533116 DNAJC5BQ9UF47 199 aa25.77■■□□□ 1.72
AMPD3-217ENST00000533116 SCRIBQ14160 1630 aa25.69■■□□□ 1.7
AMPD3-217ENST00000533116 SHROOM4Q9ULL8 1493 aa25.65■■□□□ 1.7
AMPD3-217ENST00000533116 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
AMPD3-217ENST00000533116 CC2D2AQ9P2K1 1620 aa25.2■■□□□ 1.62
AMPD3-217ENST00000533116 CECR2Q9BXF3 1484 aa25.11■■□□□ 1.61
AMPD3-217ENST00000533116 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
AMPD3-217ENST00000533116 NCAPD3P42695 1498 aa24.51■■□□□ 1.51
AMPD3-217ENST00000533116 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
AMPD3-217ENST00000533116 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
AMPD3-217ENST00000533116 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.51
AMPD3-217ENST00000533116 HMGXB3Q12766 1538 aa24.39■■□□□ 1.49
AMPD3-217ENST00000533116 BAZ1BQ9UIG0 1483 aaKnown RBP24.31■■□□□ 1.48
AMPD3-217ENST00000533116 PEG3Q9GZU2 1588 aa24.28■■□□□ 1.48
AMPD3-217ENST00000533116 MROH2BQ7Z745 1585 aa24.24■■□□□ 1.47
AMPD3-217ENST00000533116 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
AMPD3-217ENST00000533116 WIZO95785 1651 aa23.99■■□□□ 1.43
AMPD3-217ENST00000533116 CUX2O14529 1486 aa23.98■■□□□ 1.43
AMPD3-217ENST00000533116 NESP48681 1621 aa23.98■■□□□ 1.43
AMPD3-217ENST00000533116 LAMC3Q9Y6N6 1575 aa23.97■■□□□ 1.43
AMPD3-217ENST00000533116 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
AMPD3-217ENST00000533116 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
AMPD3-217ENST00000533116 CADPSQ9ULU8 1353 aa23.79■■□□□ 1.4
AMPD3-217ENST00000533116 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
AMPD3-217ENST00000533116 KIF21AQ7Z4S6 1674 aa23.74■■□□□ 1.39
AMPD3-217ENST00000533116 THOC2Q8NI27 1593 aaKnown RBP23.72■■□□□ 1.39
AMPD3-217ENST00000533116 MRC2Q9UBG0 1479 aa23.58■■□□□ 1.37
AMPD3-217ENST00000533116 DNAJC5Q9H3Z4 198 aa23.58■■□□□ 1.37
AMPD3-217ENST00000533116 CEP164Q9UPV0 1460 aa23.57■■□□□ 1.36
AMPD3-217ENST00000533116 CFTRP13569 1480 aa23.56■■□□□ 1.36
AMPD3-217ENST00000533116 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
AMPD3-217ENST00000533116 WDR62O43379 1518 aa23.49■■□□□ 1.35
AMPD3-217ENST00000533116 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
AMPD3-217ENST00000533116 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
AMPD3-217ENST00000533116 URB2Q14146 1524 aaKnown RBP23.26■■□□□ 1.31
AMPD3-217ENST00000533116 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
AMPD3-217ENST00000533116 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
AMPD3-217ENST00000533116 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
AMPD3-217ENST00000533116 IFT140Q96RY7 1462 aa23.08■■□□□ 1.29
AMPD3-217ENST00000533116 DNMBPQ6XZF7 1577 aa23.07■■□□□ 1.28
AMPD3-217ENST00000533116 OSCARQ8IYS5 282 aa22.94■■□□□ 1.26
AMPD3-217ENST00000533116 ZNF608Q9ULD9 1512 aaPredicted RBP22.92■■□□□ 1.26
AMPD3-217ENST00000533116 POLA1P09884 1462 aaPredicted RBP22.87■■□□□ 1.25
AMPD3-217ENST00000533116 EIF4G3O43432 1585 aaKnown RBP22.87■■□□□ 1.25
AMPD3-217ENST00000533116 TARBP1Q13395 1621 aaKnown RBP22.85■■□□□ 1.25
AMPD3-217ENST00000533116 SOGA1O94964 1423 aa22.82■■□□□ 1.24
AMPD3-217ENST00000533116 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
AMPD3-217ENST00000533116 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.24
AMPD3-217ENST00000533116 CUX1P39880 1505 aa22.77■■□□□ 1.24
AMPD3-217ENST00000533116 RAD54L2Q9Y4B4 1467 aa22.75■■□□□ 1.23
AMPD3-217ENST00000533116 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
AMPD3-217ENST00000533116 TRIM41Q8WV44 630 aa22.72■■□□□ 1.23
AMPD3-217ENST00000533116 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
AMPD3-217ENST00000533116 FBLN2P98095 1184 aa22.67■■□□□ 1.22
AMPD3-217ENST00000533116 CHD1O14646 1710 aa22.65■■□□□ 1.22
AMPD3-217ENST00000533116 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
AMPD3-217ENST00000533116 SNAPC4Q5SXM2 1469 aa22.59■■□□□ 1.21
AMPD3-217ENST00000533116 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.2
AMPD3-217ENST00000533116 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
AMPD3-217ENST00000533116 RIMBP3CA6NJZ7 1639 aa22.56■■□□□ 1.2
AMPD3-217ENST00000533116 RIMBP3BA6NNM3 1639 aa22.56■■□□□ 1.2
AMPD3-217ENST00000533116 RIMBP3Q9UFD9 1639 aa22.56■■□□□ 1.2
AMPD3-217ENST00000533116 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
AMPD3-217ENST00000533116 ABCA10Q8WWZ4 1543 aa22.55■■□□□ 1.2
AMPD3-217ENST00000533116 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
AMPD3-217ENST00000533116 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
AMPD3-217ENST00000533116 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
AMPD3-217ENST00000533116 PBRM1Q86U86 1689 aa22.52■■□□□ 1.2
AMPD3-217ENST00000533116 ARHGEF11O15085 1522 aa22.52■■□□□ 1.19
AMPD3-217ENST00000533116 SYNJ2O15056 1496 aa22.48■■□□□ 1.19
AMPD3-217ENST00000533116 SYNJ1O43426 1573 aa22.48■■□□□ 1.19
AMPD3-217ENST00000533116 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
AMPD3-217ENST00000533116 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
AMPD3-217ENST00000533116 CYB5RLQ6IPT4 315 aa22.36■■□□□ 1.17
AMPD3-217ENST00000533116 ADAMTS12P58397 1594 aa22.3■■□□□ 1.16
AMPD3-217ENST00000533116 ERICH3Q5RHP9 1530 aa22.3■■□□□ 1.16
AMPD3-217ENST00000533116 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
AMPD3-217ENST00000533116 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
AMPD3-217ENST00000533116 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
AMPD3-217ENST00000533116 NUP160Q12769 1436 aa22.16■■□□□ 1.14
AMPD3-217ENST00000533116 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
AMPD3-217ENST00000533116 KIF27Q86VH2 1401 aa22.15■■□□□ 1.14
AMPD3-217ENST00000533116 TRHP20396 242 aaPredicted RBP22.09■■□□□ 1.13
AMPD3-217ENST00000533116 CUL7Q14999 1698 aa22.07■■□□□ 1.12
AMPD3-217ENST00000533116 SHROOM2Q13796 1616 aa22.05■■□□□ 1.12
AMPD3-217ENST00000533116 IGF1RP08069 1367 aa22■■□□□ 1.11
AMPD3-217ENST00000533116 JPH4Q96JJ6 628 aa21.98■■□□□ 1.11
AMPD3-217ENST00000533116 ERCC6L2Q5T890 1561 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms