RNA–Protein interactions for RNA: ENST00000533088.1

PPP1R16A-210, Transcript of protein phosphatase 1 regulatory subunit 16A, humanhuman

TSL 2

Gene PPP1R16A, Length 577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R16A-210ENST00000533088 NISCHQ9Y2I1 1504 aa49.73■■■■■ 5.55
PPP1R16A-210ENST00000533088 CCDC180Q9P1Z9 1646 aa44.57■■■■■ 4.72
PPP1R16A-210ENST00000533088 ABCC9O60706 1549 aa44.26■■■■■ 4.68
PPP1R16A-210ENST00000533088 RB1CC1Q8TDY2 1594 aa42.28■■■■■ 4.36
PPP1R16A-210ENST00000533088 NACADO15069 1562 aa42.04■■■■■ 4.32
PPP1R16A-210ENST00000533088 DCAF8L2P0C7V8 631 aa41.87■■■■■ 4.29
PPP1R16A-210ENST00000533088 MYO15BQ96JP2 1530 aa41.54■■■■■ 4.24
PPP1R16A-210ENST00000533088 ZCCHC6Q5VYS8 1495 aaKnown RBP41.31■■■■■ 4.2
PPP1R16A-210ENST00000533088 UNC13AQ9UPW8 1703 aa41.3■■■■■ 4.2
PPP1R16A-210ENST00000533088 DNAJC5BQ9UF47 199 aa41.21■■■■■ 4.19
PPP1R16A-210ENST00000533088 PABPN1Q86U42 306 aaKnown RBP eCLIP41.2■■■■■ 4.19
PPP1R16A-210ENST00000533088 DCAF1Q9Y4B6 1507 aa41.11■■■■■ 4.17
PPP1R16A-210ENST00000533088 BICRAQ9NZM4 1560 aa41■■■■■ 4.15
PPP1R16A-210ENST00000533088 SCRIBQ14160 1630 aa40.63■■■■■ 4.09
PPP1R16A-210ENST00000533088 SHROOM4Q9ULL8 1493 aa40.54■■■■■ 4.08
PPP1R16A-210ENST00000533088 CC2D2AQ9P2K1 1620 aa40.01■■■■■ 4
PPP1R16A-210ENST00000533088 EIF4G1Q04637 1599 aaKnown RBP40■■■■□ 3.99
PPP1R16A-210ENST00000533088 CECR2Q9BXF3 1484 aa39.85■■■■□ 3.97
PPP1R16A-210ENST00000533088 NCAPD3P42695 1498 aa38.77■■■■□ 3.8
PPP1R16A-210ENST00000533088 SMARCA4P51532 1647 aa38.77■■■■□ 3.8
PPP1R16A-210ENST00000533088 ATAD2BQ9ULI0 1458 aa38.71■■■■□ 3.79
PPP1R16A-210ENST00000533088 SMARCA2P51531 1590 aa38.65■■■■□ 3.78
PPP1R16A-210ENST00000533088 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
PPP1R16A-210ENST00000533088 HMGXB3Q12766 1538 aa38.57■■■■□ 3.76
PPP1R16A-210ENST00000533088 BAZ1BQ9UIG0 1483 aaKnown RBP38.38■■■■□ 3.73
PPP1R16A-210ENST00000533088 PEG3Q9GZU2 1588 aa38.38■■■■□ 3.73
PPP1R16A-210ENST00000533088 MROH2BQ7Z745 1585 aa38.32■■■■□ 3.73
PPP1R16A-210ENST00000533088 ERCC6Q03468 1493 aa38.23■■■■□ 3.71
PPP1R16A-210ENST00000533088 NESP48681 1621 aa38.09■■■■□ 3.69
PPP1R16A-210ENST00000533088 CUX2O14529 1486 aa38.07■■■■□ 3.68
PPP1R16A-210ENST00000533088 LAMC3Q9Y6N6 1575 aa37.9■■■■□ 3.66
PPP1R16A-210ENST00000533088 WIZO95785 1651 aa37.88■■■■□ 3.66
PPP1R16A-210ENST00000533088 DNAJC5Q9H3Z4 198 aa37.74■■■■□ 3.63
PPP1R16A-210ENST00000533088 THOC2Q8NI27 1593 aaKnown RBP37.71■■■■□ 3.63
PPP1R16A-210ENST00000533088 PDS5BQ9NTI5 1447 aa37.65■■■■□ 3.62
PPP1R16A-210ENST00000533088 KIF21AQ7Z4S6 1674 aa37.64■■■■□ 3.62
PPP1R16A-210ENST00000533088 CADPSQ9ULU8 1353 aa37.61■■■■□ 3.61
PPP1R16A-210ENST00000533088 RSF1Q96T23 1441 aaPredicted RBP37.61■■■■□ 3.61
PPP1R16A-210ENST00000533088 TOP2AP11388 1531 aaKnown RBP37.46■■■■□ 3.59
PPP1R16A-210ENST00000533088 MRC2Q9UBG0 1479 aa37.34■■■■□ 3.57
PPP1R16A-210ENST00000533088 CEP164Q9UPV0 1460 aa37.26■■■■□ 3.55
PPP1R16A-210ENST00000533088 CFTRP13569 1480 aa37.25■■■■□ 3.55
PPP1R16A-210ENST00000533088 WDR62O43379 1518 aa37.25■■■■□ 3.55
PPP1R16A-210ENST00000533088 FANCD2Q9BXW9 1451 aa37.21■■■■□ 3.55
PPP1R16A-210ENST00000533088 CCDC88BA6NC98 1476 aa36.97■■■■□ 3.51
PPP1R16A-210ENST00000533088 PRDM2Q13029 1718 aa36.95■■■■□ 3.51
PPP1R16A-210ENST00000533088 URB2Q14146 1524 aaKnown RBP36.88■■■■□ 3.49
PPP1R16A-210ENST00000533088 TOPBP1Q92547 1522 aa36.54■■■■□ 3.44
PPP1R16A-210ENST00000533088 IFT140Q96RY7 1462 aa36.49■■■■□ 3.43
PPP1R16A-210ENST00000533088 ABCC8Q09428 1581 aa36.47■■■■□ 3.43
PPP1R16A-210ENST00000533088 DNMBPQ6XZF7 1577 aa36.45■■■■□ 3.43
PPP1R16A-210ENST00000533088 OSCARQ8IYS5 282 aa36.39■■■■□ 3.42
PPP1R16A-210ENST00000533088 ZNF608Q9ULD9 1512 aaPredicted RBP36.38■■■■□ 3.41
PPP1R16A-210ENST00000533088 EIF4G3O43432 1585 aaKnown RBP36.24■■■■□ 3.39
PPP1R16A-210ENST00000533088 TARBP1Q13395 1621 aaKnown RBP36.19■■■■□ 3.38
PPP1R16A-210ENST00000533088 POLA1P09884 1462 aaPredicted RBP36.18■■■■□ 3.38
PPP1R16A-210ENST00000533088 TRIM41Q8WV44 630 aa36.17■■■■□ 3.38
PPP1R16A-210ENST00000533088 SUPT5HO00267 1087 aaKnown RBP36.12■■■■□ 3.37
PPP1R16A-210ENST00000533088 AQRO60306 1485 aaKnown RBP eCLIP36.05■■■■□ 3.36
PPP1R16A-210ENST00000533088 RAD54L2Q9Y4B4 1467 aa36.02■■■■□ 3.36
PPP1R16A-210ENST00000533088 FGD5Q6ZNL6 1462 aa36■■■■□ 3.35
PPP1R16A-210ENST00000533088 CUX1P39880 1505 aa36■■■■□ 3.35
PPP1R16A-210ENST00000533088 SOGA1O94964 1423 aa35.99■■■■□ 3.35
PPP1R16A-210ENST00000533088 CHD1O14646 1710 aa35.91■■■■□ 3.34
PPP1R16A-210ENST00000533088 WDR97A6NE52 1622 aa35.89■■■■□ 3.34
PPP1R16A-210ENST00000533088 TDRD9Q8NDG6 1382 aaKnown RBP35.88■■■■□ 3.33
PPP1R16A-210ENST00000533088 RIMBP3CA6NJZ7 1639 aa35.86■■■■□ 3.33
PPP1R16A-210ENST00000533088 RIMBP3BA6NNM3 1639 aa35.86■■■■□ 3.33
PPP1R16A-210ENST00000533088 RIMBP3Q9UFD9 1639 aa35.86■■■■□ 3.33
PPP1R16A-210ENST00000533088 FBLN2P98095 1184 aa35.8■■■■□ 3.32
PPP1R16A-210ENST00000533088 ARHGEF11O15085 1522 aa35.78■■■■□ 3.32
PPP1R16A-210ENST00000533088 SNAPC4Q5SXM2 1469 aa35.76■■■■□ 3.32
PPP1R16A-210ENST00000533088 GRIN2BQ13224 1484 aa35.68■■■■□ 3.3
PPP1R16A-210ENST00000533088 MAGI1Q96QZ7 1491 aaPredicted RBP35.67■■■■□ 3.3
PPP1R16A-210ENST00000533088 ABCA10Q8WWZ4 1543 aa35.6■■■■□ 3.29
PPP1R16A-210ENST00000533088 PBRM1Q86U86 1689 aa35.59■■■■□ 3.29
PPP1R16A-210ENST00000533088 CHMP7Q8WUX9 453 aaPredicted RBP35.59■■■■□ 3.29
PPP1R16A-210ENST00000533088 GAPVD1Q14C86 1478 aa35.58■■■■□ 3.29
PPP1R16A-210ENST00000533088 ABCA5Q8WWZ7 1642 aa35.55■■■■□ 3.28
PPP1R16A-210ENST00000533088 SYNJ2O15056 1496 aa35.54■■■■□ 3.28
PPP1R16A-210ENST00000533088 SYNJ1O43426 1573 aa35.52■■■■□ 3.28
PPP1R16A-210ENST00000533088 BIVM-ERCC5R4GMW8 1640 aa35.52■■■■□ 3.28
PPP1R16A-210ENST00000533088 TOP2BQ02880 1626 aa35.51■■■■□ 3.28
PPP1R16A-210ENST00000533088 WRNQ14191 1432 aaPredicted RBP eCLIP35.5■■■■□ 3.27
PPP1R16A-210ENST00000533088 CLASP1Q7Z460 1538 aa35.5■■■■□ 3.27
PPP1R16A-210ENST00000533088 CYB5RLQ6IPT4 315 aa35.49■■■■□ 3.27
PPP1R16A-210ENST00000533088 ARAP1Q96P48 1450 aa35.45■■■■□ 3.27
PPP1R16A-210ENST00000533088 ADAMTS12P58397 1594 aa35.29■■■■□ 3.24
PPP1R16A-210ENST00000533088 GRIN2AQ12879 1464 aa35.23■■■■□ 3.23
PPP1R16A-210ENST00000533088 ERICH3Q5RHP9 1530 aa35.17■■■■□ 3.22
PPP1R16A-210ENST00000533088 FHAD1B1AJZ9 1412 aa35.15■■■■□ 3.22
PPP1R16A-210ENST00000533088 CEP170Q5SW79 1584 aa35.1■■■■□ 3.21
PPP1R16A-210ENST00000533088 NUP160Q12769 1436 aa35.09■■■■□ 3.21
PPP1R16A-210ENST00000533088 TRHP20396 242 aaPredicted RBP35.03■■■■□ 3.2
PPP1R16A-210ENST00000533088 ERCC6L2Q5T890 1561 aa34.94■■■■□ 3.18
PPP1R16A-210ENST00000533088 SHROOM2Q13796 1616 aa34.92■■■■□ 3.18
PPP1R16A-210ENST00000533088 KIF27Q86VH2 1401 aa34.81■■■■□ 3.16
PPP1R16A-210ENST00000533088 RUSC2Q8N2Y8 1516 aa34.78■■■■□ 3.16
PPP1R16A-210ENST00000533088 CUL7Q14999 1698 aa34.74■■■■□ 3.15
PPP1R16A-210ENST00000533088 JPH4Q96JJ6 628 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms