RNA–Protein interactions for RNA: ENST00000532897.5

MKNK1-228, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

TSL 2

Gene MKNK1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-228ENST00000532897 NISCHQ9Y2I1 1504 aa52.74■■■■■ 6.03
MKNK1-228ENST00000532897 CCDC180Q9P1Z9 1646 aa46.72■■■■■ 5.07
MKNK1-228ENST00000532897 ABCC9O60706 1549 aa45.97■■■■■ 4.95
MKNK1-228ENST00000532897 DCAF8L2P0C7V8 631 aa44.31■■■■■ 4.68
MKNK1-228ENST00000532897 RB1CC1Q8TDY2 1594 aa44.15■■■■■ 4.66
MKNK1-228ENST00000532897 NACADO15069 1562 aa44.12■■■■■ 4.65
MKNK1-228ENST00000532897 ZCCHC6Q5VYS8 1495 aaKnown RBP43.89■■■■■ 4.62
MKNK1-228ENST00000532897 MYO15BQ96JP2 1530 aa43.87■■■■■ 4.61
MKNK1-228ENST00000532897 DCAF1Q9Y4B6 1507 aa43.64■■■■■ 4.58
MKNK1-228ENST00000532897 PABPN1Q86U42 306 aaKnown RBP eCLIP43.07■■■■■ 4.49
MKNK1-228ENST00000532897 UNC13AQ9UPW8 1703 aa42.78■■■■■ 4.44
MKNK1-228ENST00000532897 BICRAQ9NZM4 1560 aa42.72■■■■■ 4.43
MKNK1-228ENST00000532897 SCRIBQ14160 1630 aa42.69■■■■■ 4.42
MKNK1-228ENST00000532897 SHROOM4Q9ULL8 1493 aa42.43■■■■■ 4.38
MKNK1-228ENST00000532897 DNAJC5BQ9UF47 199 aa42.31■■■■■ 4.36
MKNK1-228ENST00000532897 EIF4G1Q04637 1599 aaKnown RBP41.67■■■■■ 4.26
MKNK1-228ENST00000532897 CC2D2AQ9P2K1 1620 aa41.47■■■■■ 4.23
MKNK1-228ENST00000532897 CECR2Q9BXF3 1484 aa41.35■■■■■ 4.21
MKNK1-228ENST00000532897 BAZ1AQ9NRL2 1556 aaPredicted RBP40.87■■■■■ 4.13
MKNK1-228ENST00000532897 SMARCA4P51532 1647 aa40.83■■■■■ 4.13
MKNK1-228ENST00000532897 NCAPD3P42695 1498 aa40.79■■■■■ 4.12
MKNK1-228ENST00000532897 ATAD2BQ9ULI0 1458 aa40.77■■■■■ 4.12
MKNK1-228ENST00000532897 SMARCA2P51531 1590 aa40.69■■■■■ 4.1
MKNK1-228ENST00000532897 MROH2BQ7Z745 1585 aa40.61■■■■■ 4.09
MKNK1-228ENST00000532897 HMGXB3Q12766 1538 aa40.47■■■■■ 4.07
MKNK1-228ENST00000532897 PEG3Q9GZU2 1588 aa40.47■■■■■ 4.07
MKNK1-228ENST00000532897 BAZ1BQ9UIG0 1483 aaKnown RBP40.43■■■■■ 4.06
MKNK1-228ENST00000532897 RSF1Q96T23 1441 aaPredicted RBP40.22■■■■■ 4.03
MKNK1-228ENST00000532897 WIZO95785 1651 aa40.05■■■■■ 4
MKNK1-228ENST00000532897 TOP2AP11388 1531 aaKnown RBP39.73■■■■□ 3.95
MKNK1-228ENST00000532897 NESP48681 1621 aa39.71■■■■□ 3.95
MKNK1-228ENST00000532897 ERCC6Q03468 1493 aa39.7■■■■□ 3.95
MKNK1-228ENST00000532897 CADPSQ9ULU8 1353 aa39.64■■■■□ 3.94
MKNK1-228ENST00000532897 LAMC3Q9Y6N6 1575 aa39.6■■■■□ 3.93
MKNK1-228ENST00000532897 PDS5BQ9NTI5 1447 aa39.51■■■■□ 3.92
MKNK1-228ENST00000532897 CCDC88BA6NC98 1476 aa39.33■■■■□ 3.89
MKNK1-228ENST00000532897 CFTRP13569 1480 aa39.33■■■■□ 3.89
MKNK1-228ENST00000532897 CUX2O14529 1486 aa39.27■■■■□ 3.88
MKNK1-228ENST00000532897 SUPT5HO00267 1087 aaKnown RBP39.26■■■■□ 3.88
MKNK1-228ENST00000532897 FANCD2Q9BXW9 1451 aa39.11■■■■□ 3.85
MKNK1-228ENST00000532897 CEP164Q9UPV0 1460 aa39.05■■■■□ 3.84
MKNK1-228ENST00000532897 KIF21AQ7Z4S6 1674 aa39.03■■■■□ 3.84
MKNK1-228ENST00000532897 MRC2Q9UBG0 1479 aa39.02■■■■□ 3.84
MKNK1-228ENST00000532897 THOC2Q8NI27 1593 aaKnown RBP39.01■■■■□ 3.84
MKNK1-228ENST00000532897 WDR62O43379 1518 aa38.82■■■■□ 3.8
MKNK1-228ENST00000532897 URB2Q14146 1524 aaKnown RBP38.66■■■■□ 3.78
MKNK1-228ENST00000532897 PRDM2Q13029 1718 aa38.63■■■■□ 3.77
MKNK1-228ENST00000532897 ABCC8Q09428 1581 aa38.53■■■■□ 3.76
MKNK1-228ENST00000532897 TOPBP1Q92547 1522 aa38.43■■■■□ 3.74
MKNK1-228ENST00000532897 DNMBPQ6XZF7 1577 aa38.35■■■■□ 3.73
MKNK1-228ENST00000532897 IFT140Q96RY7 1462 aa38.28■■■■□ 3.72
MKNK1-228ENST00000532897 DNAJC5Q9H3Z4 198 aa38.24■■■■□ 3.71
MKNK1-228ENST00000532897 POLA1P09884 1462 aaPredicted RBP38.12■■■■□ 3.69
MKNK1-228ENST00000532897 CUX1P39880 1505 aa38.09■■■■□ 3.69
MKNK1-228ENST00000532897 SOGA1O94964 1423 aa38.06■■■■□ 3.68
MKNK1-228ENST00000532897 ZNF608Q9ULD9 1512 aaPredicted RBP38.04■■■■□ 3.68
MKNK1-228ENST00000532897 FGD5Q6ZNL6 1462 aa38.01■■■■□ 3.67
MKNK1-228ENST00000532897 RAD54L2Q9Y4B4 1467 aa37.96■■■■□ 3.67
MKNK1-228ENST00000532897 WRNQ14191 1432 aaPredicted RBP eCLIP37.95■■■■□ 3.67
MKNK1-228ENST00000532897 TARBP1Q13395 1621 aaKnown RBP37.91■■■■□ 3.66
MKNK1-228ENST00000532897 AQRO60306 1485 aaKnown RBP eCLIP37.88■■■■□ 3.651e-8■■■■■ 42.9
MKNK1-228ENST00000532897 TDRD9Q8NDG6 1382 aaKnown RBP37.85■■■■□ 3.65
MKNK1-228ENST00000532897 OSCARQ8IYS5 282 aa37.79■■■■□ 3.64
MKNK1-228ENST00000532897 EIF4G3O43432 1585 aaKnown RBP37.76■■■■□ 3.64
MKNK1-228ENST00000532897 TOP2BQ02880 1626 aa37.72■■■■□ 3.63
MKNK1-228ENST00000532897 WDR97A6NE52 1622 aa37.68■■■■□ 3.62
MKNK1-228ENST00000532897 SYNJ1O43426 1573 aa37.68■■■■□ 3.62
MKNK1-228ENST00000532897 ABCA10Q8WWZ4 1543 aa37.66■■■■□ 3.62
MKNK1-228ENST00000532897 BIVM-ERCC5R4GMW8 1640 aa37.63■■■■□ 3.61
MKNK1-228ENST00000532897 GRIN2BQ13224 1484 aa37.58■■■■□ 3.61
MKNK1-228ENST00000532897 FBLN2P98095 1184 aa37.57■■■■□ 3.6
MKNK1-228ENST00000532897 GAPVD1Q14C86 1478 aa37.57■■■■□ 3.6
MKNK1-228ENST00000532897 SNAPC4Q5SXM2 1469 aa37.49■■■■□ 3.59
MKNK1-228ENST00000532897 MAGI1Q96QZ7 1491 aaPredicted RBP37.47■■■■□ 3.59
MKNK1-228ENST00000532897 CHMP7Q8WUX9 453 aaPredicted RBP37.47■■■■□ 3.59
MKNK1-228ENST00000532897 ABCA5Q8WWZ7 1642 aa37.38■■■■□ 3.57
MKNK1-228ENST00000532897 SYNJ2O15056 1496 aa37.33■■■■□ 3.57
MKNK1-228ENST00000532897 KIF27Q86VH2 1401 aa37.2■■■■□ 3.55
MKNK1-228ENST00000532897 PBRM1Q86U86 1689 aa37.2■■■■□ 3.55
MKNK1-228ENST00000532897 ERICH3Q5RHP9 1530 aa37.2■■■■□ 3.55
MKNK1-228ENST00000532897 CHD1O14646 1710 aa37.18■■■■□ 3.54
MKNK1-228ENST00000532897 FHAD1B1AJZ9 1412 aa37.17■■■■□ 3.54
MKNK1-228ENST00000532897 TRIM41Q8WV44 630 aa37.14■■■■□ 3.54
MKNK1-228ENST00000532897 IGF1RP08069 1367 aa37.06■■■■□ 3.52
MKNK1-228ENST00000532897 GRIN2AQ12879 1464 aa37.06■■■■□ 3.52
MKNK1-228ENST00000532897 ADAMTS12P58397 1594 aa37.05■■■■□ 3.52
MKNK1-228ENST00000532897 ARHGEF11O15085 1522 aa36.96■■■■□ 3.51
MKNK1-228ENST00000532897 CLASP1Q7Z460 1538 aa36.95■■■■□ 3.51
MKNK1-228ENST00000532897 NUP160Q12769 1436 aa36.92■■■■□ 3.5
MKNK1-228ENST00000532897 RIMBP3CA6NJZ7 1639 aa36.87■■■■□ 3.49
MKNK1-228ENST00000532897 RIMBP3BA6NNM3 1639 aa36.87■■■■□ 3.49
MKNK1-228ENST00000532897 RIMBP3Q9UFD9 1639 aa36.87■■■■□ 3.49
MKNK1-228ENST00000532897 CARMIL1Q5VZK9 1371 aa36.84■■■■□ 3.49
MKNK1-228ENST00000532897 CYB5RLQ6IPT4 315 aa36.81■■■■□ 3.48
MKNK1-228ENST00000532897 CEP170Q5SW79 1584 aa36.78■■■■□ 3.48
MKNK1-228ENST00000532897 CUL7Q14999 1698 aa36.74■■■■□ 3.47
MKNK1-228ENST00000532897 RUSC2Q8N2Y8 1516 aa36.7■■■■□ 3.47
MKNK1-228ENST00000532897 JPH4Q96JJ6 628 aa36.67■■■■□ 3.46
MKNK1-228ENST00000532897 ARAP1Q96P48 1450 aa36.66■■■■□ 3.46
MKNK1-228ENST00000532897 CHIC1Q5VXU3 224 aa36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms